Wall clock time and date at job start Mon Mar 8 2021 06:24:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00895 * 1 3 3 H 1.00892 * 109.47270 * 1 2 4 4 H 1.00898 * 109.47218 * 239.99825 * 1 2 3 5 5 C 1.46906 * 109.47030 * 120.00499 * 1 2 3 6 6 H 1.08996 * 109.46825 * 180.02562 * 5 1 2 7 7 C 1.52999 * 109.46507 * 299.99794 * 5 1 2 8 8 C 1.53005 * 109.47159 * 60.00509 * 7 5 1 9 9 C 1.52997 * 109.47452 * 59.99536 * 8 7 5 10 10 H 1.09002 * 109.46695 * 59.99734 * 9 8 7 11 11 C 1.50693 * 109.46989 * 180.02562 * 9 8 7 12 12 C 1.35365 * 126.73350 * 34.71425 * 11 9 8 13 13 N 1.36120 * 106.04978 * 179.90592 * 12 11 9 14 14 C 1.40251 * 125.93787 * 180.12933 * 13 12 11 15 15 C 1.38799 * 120.05927 * 180.24885 * 14 13 12 16 16 C 1.50700 * 120.03553 * 359.94902 * 15 14 13 17 17 O 1.42900 * 109.46913 * 285.00293 * 16 15 14 18 18 Si 1.86302 * 109.47016 * 165.00223 * 16 15 14 19 19 C 1.38152 * 119.93280 * 179.97438 * 15 14 13 20 20 C 1.38257 * 120.06500 * 359.97438 * 19 15 14 21 21 C 1.38301 * 120.12812 * 0.02574 * 20 19 15 22 22 C 1.38102 * 120.06528 * 359.70018 * 21 20 19 23 23 N 1.28726 * 108.11541 * 0.35882 * 13 12 11 24 24 N 1.28600 * 110.23408 * 359.77059 * 23 13 12 25 25 C 1.53002 * 109.46817 * 300.00239 * 9 8 7 26 26 C 1.52997 * 109.47302 * 59.99767 * 5 1 2 27 27 H 1.09000 * 109.47486 * 299.99972 * 7 5 1 28 28 H 1.09002 * 109.46716 * 180.02562 * 7 5 1 29 29 H 1.09002 * 109.46935 * 299.99411 * 8 7 5 30 30 H 1.09001 * 109.46812 * 179.97438 * 8 7 5 31 31 H 1.07999 * 126.97698 * 359.97438 * 12 11 9 32 32 H 1.09000 * 109.46770 * 45.00593 * 16 15 14 33 33 H 0.96699 * 113.99966 * 60.00426 * 17 16 15 34 34 H 1.48501 * 110.00148 * 300.00173 * 18 16 15 35 35 H 1.48507 * 110.00032 * 61.32134 * 18 16 15 36 36 H 1.07993 * 119.96584 * 179.97438 * 19 15 14 37 37 H 1.08000 * 119.93455 * 180.02562 * 20 19 15 38 38 H 1.08001 * 119.96628 * 179.97438 * 21 20 19 39 39 H 1.08002 * 120.03405 * 180.27542 * 22 21 20 40 40 H 1.08992 * 109.47063 * 299.99823 * 25 9 8 41 41 H 1.09004 * 109.46733 * 179.97438 * 25 9 8 42 42 H 1.09002 * 109.47153 * 180.02562 * 26 5 1 43 43 H 1.09001 * 109.46832 * 60.00356 * 26 5 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0089 0.0000 0.0000 3 1 -0.3363 0.9512 0.0000 4 1 -0.3363 -0.4757 0.8238 5 6 -0.4897 -0.6926 -1.1994 6 1 -1.5796 -0.6922 -1.1996 7 6 0.0204 0.0286 -2.4486 8 6 1.5504 0.0286 -2.4486 9 6 2.0605 -1.4139 -2.4485 10 1 1.6971 -1.9277 -3.3385 11 6 3.5674 -1.4138 -2.4479 12 6 4.3767 -0.5221 -1.8296 13 7 5.6503 -0.9184 -2.1012 14 6 6.8212 -0.2860 -1.6584 15 6 8.0629 -0.7942 -2.0141 16 6 8.1546 -2.0272 -2.8758 17 8 7.8360 -3.1798 -2.0935 18 14 9.8858 -2.1899 -3.5447 19 6 9.2146 -0.1689 -1.5769 20 6 9.1313 0.9623 -0.7864 21 6 7.8954 1.4709 -0.4304 22 6 6.7407 0.8533 -0.8691 23 7 5.5930 -1.9717 -2.8390 24 7 4.3678 -2.2917 -3.0629 25 6 1.5504 -2.1350 -1.1993 26 6 0.0204 -2.1351 -1.1994 27 1 -0.3430 1.0563 -2.4487 28 1 -0.3433 -0.4850 -3.3386 29 1 1.9137 0.5425 -1.5586 30 1 1.9137 0.5421 -3.3388 31 1 4.0735 0.3302 -1.2396 32 1 7.4512 -1.9445 -3.7043 33 1 6.9472 -3.1633 -1.7127 34 1 10.2294 -0.9973 -4.3601 35 1 10.8512 -2.3353 -2.4257 36 1 10.1810 -0.5641 -1.8530 37 1 10.0330 1.4496 -0.4462 38 1 7.8333 2.3544 0.1876 39 1 5.7759 1.2535 -0.5945 40 1 1.9136 -1.6212 -0.3094 41 1 1.9134 -3.1628 -1.1995 42 1 -0.3426 -2.6489 -2.0896 43 1 -0.3430 -2.6489 -0.3094 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273910_15259592_17761092.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:24:02 Heat of formation + Delta-G solvation = 189.625535 kcal Electronic energy + Delta-G solvation = -25364.398555 eV Core-core repulsion = 21917.187724 eV Total energy + Delta-G solvation = -3447.210831 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 302.161 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -44.77527 -41.54861 -40.89832 -37.78713 -36.92528 -35.62500 -33.25542 -32.63509 -32.04309 -31.19984 -29.89184 -27.23027 -25.62827 -24.72636 -23.91182 -23.38778 -22.68555 -21.61831 -20.65764 -19.77087 -19.01943 -18.56066 -18.49193 -17.83817 -17.27186 -16.94202 -16.74451 -16.51508 -16.17909 -15.72936 -15.43156 -15.28606 -15.08841 -14.96671 -14.27418 -13.97787 -13.90550 -13.69129 -13.46357 -13.37191 -13.23228 -12.90983 -12.87041 -12.43518 -12.27312 -12.22022 -12.16846 -11.64482 -11.56635 -11.48759 -11.36010 -11.13251 -10.39352 -10.25927 -9.83879 -4.97055 -0.65535 -0.10305 0.77901 1.04423 1.18316 1.30322 1.45403 1.67305 1.72382 2.35657 2.94284 3.17042 3.20692 3.30212 3.35875 3.52584 3.57390 3.65040 3.68995 3.78249 3.88352 3.93781 3.96694 4.00845 4.03812 4.14607 4.18663 4.26690 4.28530 4.31422 4.39392 4.50480 4.61744 4.67360 4.70290 4.85794 4.90702 4.92647 4.94726 5.02553 5.13109 5.16467 5.22287 5.23636 5.31352 5.34737 5.36233 5.67082 6.31019 7.25150 Molecular weight = 302.16amu Principal moments of inertia in cm(-1) A = 0.022581 B = 0.004270 C = 0.003809 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1239.668110 B = 6556.560654 C = 7348.585117 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.626 5.626 2 H 0.432 0.568 3 H 0.453 0.547 4 H 0.451 0.549 5 C 0.061 3.939 6 H 0.167 0.833 7 C -0.142 4.142 8 C -0.126 4.126 9 C -0.006 4.006 10 H 0.072 0.928 11 C -0.018 4.018 12 C -0.029 4.029 13 N -0.243 5.243 14 C 0.104 3.896 15 C -0.118 4.118 16 C -0.089 4.089 17 O -0.538 6.538 18 Si 0.791 3.209 19 C -0.129 4.129 20 C -0.104 4.104 21 C -0.089 4.089 22 C -0.095 4.095 23 N -0.131 5.131 24 N -0.296 5.296 25 C -0.124 4.124 26 C -0.142 4.142 27 H 0.117 0.883 28 H 0.084 0.916 29 H 0.110 0.890 30 H 0.064 0.936 31 H 0.251 0.749 32 H 0.084 0.916 33 H 0.357 0.643 34 H -0.263 1.263 35 H -0.279 1.279 36 H 0.122 0.878 37 H 0.153 0.847 38 H 0.179 0.821 39 H 0.189 0.811 40 H 0.103 0.897 41 H 0.048 0.952 42 H 0.084 0.916 43 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -27.644 11.842 12.881 32.716 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.031 5.031 2 H 0.263 0.737 3 H 0.285 0.715 4 H 0.283 0.717 5 C -0.044 4.044 6 H 0.184 0.816 7 C -0.179 4.179 8 C -0.164 4.164 9 C -0.027 4.027 10 H 0.090 0.910 11 C -0.157 4.157 12 C -0.177 4.177 13 N -0.029 5.029 14 C 0.013 3.987 15 C -0.121 4.121 16 C -0.198 4.198 17 O -0.344 6.344 18 Si 0.692 3.308 19 C -0.147 4.147 20 C -0.122 4.122 21 C -0.107 4.107 22 C -0.115 4.115 23 N -0.107 5.107 24 N -0.161 5.161 25 C -0.162 4.162 26 C -0.180 4.180 27 H 0.135 0.865 28 H 0.103 0.897 29 H 0.128 0.872 30 H 0.083 0.917 31 H 0.267 0.733 32 H 0.102 0.898 33 H 0.206 0.794 34 H -0.189 1.189 35 H -0.205 1.205 36 H 0.139 0.861 37 H 0.171 0.829 38 H 0.197 0.803 39 H 0.206 0.794 40 H 0.121 0.879 41 H 0.067 0.933 42 H 0.103 0.897 43 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -25.565 10.733 11.665 30.081 hybrid contribution -0.547 0.907 0.744 1.294 sum -26.112 11.640 12.409 31.166 Atomic orbital electron populations 1.42556 1.21553 1.21524 1.17479 0.73731 0.71511 0.71712 1.22838 1.04603 0.92543 0.84445 0.81553 1.22070 0.94151 1.03839 0.97860 1.21840 0.96281 0.93152 1.05142 1.19743 0.82971 0.99227 1.00737 0.90968 1.22695 0.99249 0.93809 0.99942 1.24366 0.80949 1.05301 1.07100 1.44866 1.07007 1.18768 1.32305 1.17759 0.82182 0.96430 1.02306 1.20309 0.92747 0.98729 1.00284 1.25517 1.14814 0.83953 0.95491 1.86727 1.37191 1.40539 1.69934 0.91920 0.70552 0.86227 0.82126 1.21140 0.96925 0.97524 0.99133 1.21744 1.00811 0.94293 0.95392 1.21621 0.90315 1.00464 0.98310 1.21409 1.02590 0.91817 0.95687 1.78389 1.16185 1.03303 1.12843 1.75146 0.96031 1.24526 1.20372 1.21761 0.96242 1.01441 0.96761 1.22061 0.93925 0.95235 1.06732 0.86464 0.89728 0.87165 0.91706 0.73304 0.89797 0.79353 1.18889 1.20532 0.86098 0.82898 0.80320 0.79425 0.87921 0.93260 0.89700 0.87184 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.63 48.51 4.05 -168.68 -0.68 47.83 16 2 H 0.43 -33.55 5.25 -89.70 -0.47 -34.02 16 3 H 0.45 -37.37 8.96 -89.70 -0.80 -38.17 16 4 H 0.45 -36.71 8.96 -89.70 -0.80 -37.51 16 5 C 0.06 -4.02 3.50 44.91 0.16 -3.86 16 6 H 0.17 -11.40 8.14 -2.39 -0.02 -11.42 16 7 C -0.14 8.13 5.59 30.60 0.17 8.30 16 8 C -0.13 6.51 4.53 30.60 0.14 6.65 16 9 C -0.01 0.26 2.65 -11.54 -0.03 0.23 16 10 H 0.07 -2.46 8.14 -2.39 -0.02 -2.48 16 11 C -0.02 0.54 6.16 41.60 0.26 0.79 16 12 C -0.03 0.95 10.09 83.36 0.84 1.79 16 13 N -0.24 5.13 3.52 -187.05 -0.66 4.47 16 14 C 0.10 -2.06 6.63 38.07 0.25 -1.81 16 15 C -0.12 1.51 5.28 -19.75 -0.10 1.41 16 16 C -0.09 0.83 1.82 71.24 0.13 0.96 16 17 O -0.54 3.35 12.52 -148.98 -1.87 1.49 16 18 Si 0.79 -8.04 30.41 68.60 2.09 -5.95 16 19 C -0.13 1.74 8.66 22.25 0.19 1.93 16 20 C -0.10 2.09 10.04 22.29 0.22 2.31 16 21 C -0.09 2.37 10.04 22.25 0.22 2.59 16 22 C -0.10 2.70 9.46 22.38 0.21 2.91 16 23 N -0.13 1.74 7.53 37.02 0.28 2.02 16 24 N -0.30 4.62 12.39 -48.59 -0.60 4.02 16 25 C -0.12 5.95 4.92 30.60 0.15 6.10 16 26 C -0.14 7.84 5.59 30.59 0.17 8.01 16 27 H 0.12 -7.13 8.14 -2.39 -0.02 -7.15 16 28 H 0.08 -4.23 8.14 -2.39 -0.02 -4.25 16 29 H 0.11 -6.84 5.88 -2.39 -0.01 -6.86 16 30 H 0.06 -2.81 8.14 -2.39 -0.02 -2.83 16 31 H 0.25 -11.99 6.53 -2.91 -0.02 -12.01 16 32 H 0.08 -0.69 6.09 -2.39 -0.01 -0.70 16 33 H 0.36 -2.93 6.94 -74.06 -0.51 -3.44 16 34 H -0.26 2.07 7.11 99.48 0.71 2.78 16 35 H -0.28 1.55 6.81 99.48 0.68 2.23 16 36 H 0.12 -1.38 4.94 -2.91 -0.01 -1.39 16 37 H 0.15 -3.57 8.06 -2.91 -0.02 -3.59 16 38 H 0.18 -6.00 8.06 -2.91 -0.02 -6.02 16 39 H 0.19 -7.53 6.77 -2.91 -0.02 -7.55 16 40 H 0.10 -5.85 6.65 -2.39 -0.02 -5.86 16 41 H 0.05 -1.81 8.14 -2.39 -0.02 -1.83 16 42 H 0.08 -4.08 8.14 -2.39 -0.02 -4.10 16 43 H 0.11 -6.34 8.14 -2.39 -0.02 -6.35 16 Total: 1.00 -100.38 327.51 0.03 -100.34 By element: Atomic # 1 Polarization: -191.02 SS G_CDS: -1.51 Total: -192.53 kcal Atomic # 6 Polarization: 35.34 SS G_CDS: 2.98 Total: 38.32 kcal Atomic # 7 Polarization: 60.00 SS G_CDS: -1.67 Total: 58.33 kcal Atomic # 8 Polarization: 3.35 SS G_CDS: -1.87 Total: 1.49 kcal Atomic # 14 Polarization: -8.04 SS G_CDS: 2.09 Total: -5.95 kcal Total: -100.38 0.03 -100.34 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_15259592_17761092.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 289.969 kcal (2) G-P(sol) polarization free energy of solvation -100.375 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 189.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.031 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -100.344 kcal (6) G-S(sol) free energy of system = (1) + (5) 189.626 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds