Wall clock time and date at job start Mon Mar 8 2021 08:42:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.35949 * 126.48429 * 2 1 4 4 N 1.39439 * 125.75558 * 359.96041 * 3 2 1 5 5 C 1.36366 * 126.87120 * 180.02562 * 4 3 2 6 6 C 1.34965 * 106.76726 * 179.97438 * 5 4 3 7 7 C 1.50702 * 125.48708 * 179.97438 * 6 5 4 8 8 C 1.52999 * 109.46938 * 125.00491 * 7 6 5 9 9 O 1.42907 * 109.47318 * 180.02562 * 8 7 6 10 10 Si 1.63100 * 114.00341 * 180.02562 * 9 8 7 11 11 C 1.86301 * 109.46573 * 299.99621 * 10 9 8 12 12 C 1.86294 * 109.47342 * 59.99148 * 10 9 8 13 13 C 1.86296 * 109.47249 * 179.97438 * 10 9 8 14 14 C 1.52998 * 109.47170 * 59.99225 * 13 10 9 15 15 C 1.53001 * 109.47240 * 179.97438 * 13 10 9 16 16 C 1.53001 * 109.46808 * 299.99177 * 13 10 9 17 17 N 1.33369 * 109.02261 * 0.02562 * 6 5 4 18 18 N 1.28759 * 109.93905 * 359.97438 * 17 6 5 19 19 N 1.31062 * 108.48364 * 180.22939 * 3 2 1 20 20 C 1.34163 * 109.31024 * 359.57082 * 19 3 2 21 21 Cl 1.73595 * 125.87110 * 180.14218 * 20 19 3 22 22 C 1.34689 * 108.25450 * 0.42796 * 20 19 3 23 23 C 1.50708 * 126.54407 * 179.76628 * 22 20 19 24 24 O 1.42900 * 109.47135 * 301.23117 * 23 22 20 25 25 Si 1.86296 * 109.47138 * 61.23756 * 23 22 20 26 26 H 1.48498 * 109.47612 * 54.20658 * 25 23 22 27 27 H 1.48497 * 109.47071 * 174.21004 * 25 23 22 28 28 H 1.48499 * 109.46886 * 294.20696 * 25 23 22 29 29 H 1.08997 * 109.47103 * 90.02178 * 1 2 3 30 30 H 1.09001 * 109.47700 * 210.02967 * 1 2 3 31 31 H 1.09007 * 109.46442 * 330.02502 * 1 2 3 32 32 H 1.07995 * 126.61201 * 359.97122 * 5 4 3 33 33 H 1.08997 * 109.47577 * 245.00246 * 7 6 5 34 34 H 1.08994 * 109.47307 * 5.00887 * 7 6 5 35 35 H 1.09004 * 109.47203 * 299.99725 * 8 7 6 36 36 H 1.09001 * 109.47416 * 59.99954 * 8 7 6 37 37 H 1.08998 * 109.47420 * 60.00045 * 11 10 9 38 38 H 1.09006 * 109.47307 * 180.02562 * 11 10 9 39 39 H 1.09000 * 109.47134 * 300.00045 * 11 10 9 40 40 H 1.09002 * 109.46961 * 60.00728 * 12 10 9 41 41 H 1.09002 * 109.47551 * 180.02562 * 12 10 9 42 42 H 1.08998 * 109.47286 * 300.00344 * 12 10 9 43 43 H 1.08997 * 109.46946 * 60.00774 * 14 13 10 44 44 H 1.09007 * 109.46953 * 180.02562 * 14 13 10 45 45 H 1.08996 * 109.47512 * 300.00009 * 14 13 10 46 46 H 1.09005 * 109.46981 * 59.99270 * 15 13 10 47 47 H 1.08998 * 109.47202 * 179.97438 * 15 13 10 48 48 H 1.09002 * 109.46670 * 299.99753 * 15 13 10 49 49 H 1.09006 * 109.46564 * 60.00247 * 16 13 10 50 50 H 1.08998 * 109.47155 * 180.02562 * 16 13 10 51 51 H 1.09000 * 109.47428 * 300.00184 * 16 13 10 52 52 H 1.09003 * 109.46663 * 181.23520 * 23 22 20 53 53 H 0.96698 * 113.99535 * 60.00293 * 24 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2733 1.0931 0.0000 4 7 1.8480 2.4210 -0.0008 5 6 2.6373 3.5330 -0.0013 6 6 1.8089 4.5985 -0.0026 7 6 2.2407 6.0423 -0.0030 8 6 1.5950 6.7674 -1.1855 9 8 2.0049 8.1364 -1.1863 10 14 1.3766 9.0163 -2.4074 11 6 1.9050 8.2834 -4.0366 12 6 -0.4828 8.9991 -2.2926 13 6 1.9894 10.7715 -2.2874 14 6 3.5165 10.7861 -2.3812 15 6 1.4006 11.5968 -3.4333 16 6 1.5549 11.3730 -0.9494 17 7 0.5467 4.1678 -0.0023 18 7 0.5220 2.8804 -0.0014 19 7 3.5198 0.6880 -0.0050 20 6 3.5505 -0.6532 0.0012 21 17 4.9801 -1.6380 0.0015 22 6 2.2814 -1.1043 0.0008 23 6 1.8413 -2.5457 0.0016 24 8 2.3710 -3.2061 -1.1496 25 14 2.4674 -3.3853 1.5423 26 1 2.0323 -2.6171 2.7364 27 1 1.9184 -4.7632 1.6130 28 1 3.9507 -3.4448 1.5056 29 1 -0.3633 -0.0004 -1.0276 30 1 -0.3634 -0.8897 0.5143 31 1 -0.3632 0.8903 0.5135 32 1 3.7170 3.5564 -0.0007 33 1 1.9280 6.5154 0.9279 34 1 3.3256 6.0971 -0.0918 35 1 1.9078 6.2944 -2.1164 36 1 0.5100 6.7126 -1.0967 37 1 1.5461 7.2566 -4.1066 38 1 1.4855 8.8717 -4.8528 39 1 2.9928 8.2934 -4.1038 40 1 -0.7919 9.4280 -1.3394 41 1 -0.9027 9.5868 -3.1090 42 1 -0.8416 7.9723 -2.3626 43 1 3.8260 10.3576 -3.3345 44 1 3.8751 11.8130 -2.3106 45 1 3.9363 10.1981 -1.5651 46 1 0.3126 11.5864 -3.3668 47 1 1.7588 12.6238 -3.3628 48 1 1.7105 11.1681 -4.3863 49 1 1.9748 10.7849 -0.1332 50 1 1.9131 12.4001 -0.8793 51 1 0.4670 11.3626 -0.8825 52 1 0.7525 -2.5931 -0.0211 53 1 3.3369 -3.2027 -1.1953 RHF calculation, no. of doubly occupied orbitals= 70 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273910_15713346_13581112.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:42:40 Heat of formation + Delta-G solvation = 42.738084 kcal Electronic energy + Delta-G solvation = -33201.745961 eV Core-core repulsion = 28683.083778 eV Total energy + Delta-G solvation = -4518.662183 eV No. of doubly occupied orbitals = 70 Molecular weight (most abundant/longest-lived isotopes) = 401.156 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -44.10257 -43.19121 -38.40271 -38.17980 -37.84515 -36.79247 -35.74041 -35.56694 -33.86134 -31.50240 -29.77082 -29.26900 -29.03738 -28.36950 -27.80704 -27.34398 -27.18467 -25.06875 -24.54509 -22.65871 -22.29253 -21.21850 -20.37563 -19.35902 -18.70007 -18.11044 -17.71410 -17.43990 -16.84188 -16.49688 -16.45799 -16.30735 -15.97477 -15.88407 -15.32924 -15.24486 -14.90930 -14.82955 -14.81532 -14.62849 -14.55703 -14.00420 -13.90316 -13.78938 -13.53897 -13.38557 -13.33917 -13.19095 -13.16654 -12.98718 -12.90877 -12.90682 -12.83792 -12.67377 -12.42020 -12.35681 -12.33603 -12.17344 -11.95023 -11.70860 -11.66134 -11.39947 -11.31401 -11.28782 -11.21428 -10.83656 -10.37462 -10.28520 -10.02659 -9.46749 -0.61388 0.09965 0.39484 0.40499 0.99328 1.14054 1.36250 1.41928 1.45370 1.55834 1.56908 1.83458 1.89242 2.13735 2.50312 2.83461 3.12324 3.16256 3.35365 3.57121 3.64471 3.72772 3.88010 4.12486 4.16284 4.16414 4.19862 4.23926 4.31314 4.34742 4.50183 4.51567 4.57165 4.58559 4.68332 4.73732 4.78574 4.79032 4.79842 4.85715 4.87991 4.92268 5.04403 5.08156 5.13411 5.13863 5.15163 5.24772 5.37895 5.45333 5.47600 5.56090 5.58541 5.61308 5.65582 6.02932 6.29544 6.76286 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.052 3.948 2 N -0.426 5.426 3 C 0.435 3.565 4 N -0.305 5.305 5 C 0.079 3.921 6 C -0.038 4.038 7 C -0.035 4.035 8 C 0.083 3.917 9 O -0.632 6.632 10 Si 1.320 2.680 11 C -0.519 4.519 12 C -0.521 4.521 13 C -0.380 4.380 14 C -0.137 4.137 15 C -0.142 4.142 16 C -0.137 4.137 17 N -0.225 5.225 18 N -0.080 5.080 19 N -0.476 5.476 20 C 0.050 3.950 21 Cl 0.020 6.980 22 C 0.004 3.996 23 C -0.052 4.052 24 O -0.534 6.534 25 Si 0.967 3.033 26 H -0.260 1.260 27 H -0.240 1.240 28 H -0.231 1.231 29 H 0.100 0.900 30 H 0.128 0.872 31 H 0.103 0.897 32 H 0.231 0.769 33 H 0.097 0.903 34 H 0.118 0.882 35 H 0.062 0.938 36 H 0.060 0.940 37 H 0.065 0.935 38 H 0.076 0.924 39 H 0.073 0.927 40 H 0.070 0.930 41 H 0.076 0.924 42 H 0.065 0.935 43 H 0.060 0.940 44 H 0.048 0.952 45 H 0.060 0.940 46 H 0.061 0.939 47 H 0.051 0.949 48 H 0.062 0.938 49 H 0.059 0.941 50 H 0.048 0.952 51 H 0.058 0.942 52 H 0.149 0.851 53 H 0.384 0.616 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.303 -2.386 0.519 2.461 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 N -0.111 5.111 3 C 0.085 3.915 4 N -0.090 5.090 5 C -0.071 4.071 6 C -0.174 4.174 7 C -0.074 4.074 8 C 0.007 3.993 9 O -0.591 6.591 10 Si 1.449 2.551 11 C -0.620 4.620 12 C -0.622 4.622 13 C -0.423 4.423 14 C -0.194 4.194 15 C -0.199 4.199 16 C -0.195 4.195 17 N -0.096 5.096 18 N -0.057 5.057 19 N -0.201 5.201 20 C -0.107 4.107 21 Cl 0.048 6.952 22 C -0.115 4.115 23 C -0.162 4.162 24 O -0.340 6.340 25 Si 0.784 3.216 26 H -0.184 1.184 27 H -0.163 1.163 28 H -0.154 1.154 29 H 0.118 0.882 30 H 0.146 0.854 31 H 0.121 0.879 32 H 0.247 0.753 33 H 0.116 0.884 34 H 0.136 0.864 35 H 0.080 0.920 36 H 0.078 0.922 37 H 0.084 0.916 38 H 0.095 0.905 39 H 0.092 0.908 40 H 0.089 0.911 41 H 0.095 0.905 42 H 0.084 0.916 43 H 0.079 0.921 44 H 0.067 0.933 45 H 0.079 0.921 46 H 0.080 0.920 47 H 0.070 0.930 48 H 0.081 0.919 49 H 0.078 0.922 50 H 0.067 0.933 51 H 0.077 0.923 52 H 0.167 0.833 53 H 0.234 0.766 Dipole moment (debyes) X Y Z Total from point charges -1.340 -2.870 1.337 3.438 hybrid contribution 0.582 0.436 -0.826 1.101 sum -0.758 -2.434 0.511 2.600 Atomic orbital electron populations 1.22805 0.72037 1.07587 1.06389 1.45286 1.09733 1.03218 1.52912 1.18028 0.85011 0.79430 1.09039 1.46555 1.08460 1.01966 1.52007 1.23960 1.00971 0.82842 0.99354 1.21800 0.87239 0.98192 1.10193 1.20036 1.03105 0.84222 1.00040 1.22017 0.98643 0.80030 0.98599 1.85304 1.78146 1.25538 1.70135 0.76128 0.61484 0.61436 0.56022 1.27125 1.06438 1.07383 1.21088 1.27162 1.25925 1.04338 1.04813 1.25879 1.00535 1.17896 0.98007 1.21547 0.94047 1.01799 1.02027 1.21611 1.00894 0.99882 0.97491 1.21547 1.01184 1.00660 0.96064 1.74226 1.21657 1.02860 1.10889 1.82131 0.93932 1.04490 1.25174 1.69790 1.16272 1.11617 1.22452 1.20342 0.88535 0.88753 1.13034 1.98404 1.35993 1.63602 1.97224 1.21884 0.88850 0.91433 1.09369 1.24866 1.05765 0.84664 1.00862 1.86556 1.27416 1.76393 1.43644 0.85418 0.82576 0.80167 0.73400 1.18382 1.16273 1.15358 0.88180 0.85409 0.87870 0.75269 0.88426 0.86417 0.91952 0.92219 0.91592 0.90508 0.90822 0.91112 0.90527 0.91619 0.92143 0.93335 0.92089 0.91993 0.93037 0.91869 0.92174 0.93291 0.92315 0.83331 0.76610 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.27 10.40 127.77 1.33 1.06 16 2 N -0.43 -0.45 3.19 -533.82 -1.70 -2.15 16 3 C 0.43 2.08 8.63 259.98 2.24 4.32 16 4 N -0.31 -1.26 3.84 -195.46 -0.75 -2.01 16 5 C 0.08 0.00 11.35 83.24 0.94 0.95 16 6 C -0.04 -0.03 6.37 41.57 0.26 0.24 16 7 C -0.03 0.11 6.14 29.85 0.18 0.29 16 8 C 0.08 -0.10 5.08 71.98 0.37 0.27 16 9 O -0.63 0.18 8.56 -148.98 -1.28 -1.10 16 10 Si 1.32 -2.36 8.45 68.60 0.58 -1.78 16 11 C -0.52 0.54 8.50 113.37 0.96 1.50 16 12 C -0.52 0.05 8.50 113.37 0.96 1.01 16 13 C -0.38 0.18 0.53 -10.79 -0.01 0.18 16 14 C -0.14 0.01 7.85 71.98 0.56 0.58 16 15 C -0.14 0.13 7.85 71.98 0.56 0.70 16 16 C -0.14 -0.05 7.85 71.98 0.56 0.51 16 17 N -0.23 -1.25 12.29 -49.02 -0.60 -1.86 16 18 N -0.08 -0.45 11.42 37.02 0.42 -0.02 16 19 N -0.48 -2.94 11.14 -188.30 -2.10 -5.04 16 20 C 0.05 0.19 7.23 83.52 0.60 0.79 16 21 Cl 0.02 0.02 24.92 -2.72 -0.07 -0.04 16 22 C 0.00 0.00 5.44 40.89 0.22 0.22 16 23 C -0.05 0.20 2.86 71.24 0.20 0.40 16 24 O -0.53 0.78 12.88 -148.98 -1.92 -1.14 16 25 Si 0.97 -3.39 26.74 68.60 1.83 -1.56 16 26 H -0.26 0.31 7.11 99.48 0.71 1.02 16 27 H -0.24 0.67 7.11 99.48 0.71 1.38 16 28 H -0.23 0.67 5.95 99.48 0.59 1.27 16 29 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 30 H 0.13 -1.47 7.21 -2.39 -0.02 -1.49 16 31 H 0.10 -0.32 6.30 -2.38 -0.02 -0.33 16 32 H 0.23 -1.37 8.06 -2.91 -0.02 -1.40 16 33 H 0.10 -0.30 8.14 -2.39 -0.02 -0.32 16 34 H 0.12 -0.86 8.10 -2.39 -0.02 -0.88 16 35 H 0.06 -0.17 7.21 -2.38 -0.02 -0.19 16 36 H 0.06 -0.03 7.21 -2.39 -0.02 -0.04 16 37 H 0.06 -0.06 7.48 -2.39 -0.02 -0.08 16 38 H 0.08 -0.12 7.79 -2.38 -0.02 -0.14 16 39 H 0.07 -0.08 7.79 -2.39 -0.02 -0.10 16 40 H 0.07 0.03 7.79 -2.39 -0.02 0.01 16 41 H 0.08 -0.07 7.79 -2.39 -0.02 -0.09 16 42 H 0.06 0.02 7.48 -2.39 -0.02 0.01 16 43 H 0.06 -0.09 7.80 -2.39 -0.02 -0.10 16 44 H 0.05 0.04 8.14 -2.38 -0.02 0.02 16 45 H 0.06 -0.01 7.96 -2.39 -0.02 -0.03 16 46 H 0.06 -0.13 7.79 -2.38 -0.02 -0.15 16 47 H 0.05 0.00 8.14 -2.39 -0.02 -0.02 16 48 H 0.06 -0.15 7.79 -2.39 -0.02 -0.17 16 49 H 0.06 0.03 7.97 -2.38 -0.02 0.01 16 50 H 0.05 0.05 8.14 -2.39 -0.02 0.04 16 51 H 0.06 -0.03 7.79 -2.39 -0.02 -0.05 16 52 H 0.15 -1.33 6.75 -2.39 -0.02 -1.35 16 53 H 0.38 -1.70 6.94 -74.06 -0.51 -2.22 16 Total: 0.00 -15.17 439.88 5.45 -9.72 By element: Atomic # 1 Polarization: -7.09 SS G_CDS: 1.05 Total: -6.04 kcal Atomic # 6 Polarization: 3.04 SS G_CDS: 9.98 Total: 13.02 kcal Atomic # 7 Polarization: -6.35 SS G_CDS: -4.73 Total: -11.08 kcal Atomic # 8 Polarization: 0.95 SS G_CDS: -3.19 Total: -2.24 kcal Atomic # 14 Polarization: -5.75 SS G_CDS: 2.41 Total: -3.34 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.04 kcal Total: -15.17 5.45 -9.72 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_15713346_13581112.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.461 kcal (2) G-P(sol) polarization free energy of solvation -15.171 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 37.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 5.448 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -9.723 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.738 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds