Wall clock time and date at job start Mon Mar 8 2021 06:46:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.37324 * 126.48084 * 2 1 4 4 C 1.50703 * 126.54459 * 359.97438 * 3 2 1 5 5 O 1.42910 * 109.46861 * 121.58692 * 4 3 2 6 6 Si 1.86299 * 109.47148 * 241.58364 * 4 3 2 7 7 H 1.48501 * 109.46975 * 54.21226 * 6 4 3 8 8 H 1.48500 * 109.46686 * 174.20858 * 6 4 3 9 9 H 1.48499 * 109.47342 * 294.20882 * 6 4 3 10 10 C 1.34691 * 106.90952 * 180.25267 * 3 2 1 11 11 Cl 1.73603 * 125.87251 * 179.70370 * 10 3 2 12 12 N 1.34166 * 108.25479 * 359.74100 * 10 3 2 13 13 C 1.31058 * 109.31082 * 0.02562 * 12 10 3 14 14 N 1.39440 * 125.76287 * 180.02562 * 13 12 10 15 15 C 1.36362 * 126.86823 * 0.32902 * 14 13 12 16 16 C 1.34971 * 106.76924 * 180.17124 * 15 14 13 17 17 C 1.50703 * 125.49093 * 179.84386 * 16 15 14 18 18 C 1.53573 * 109.47196 * 34.76374 * 17 16 15 19 19 C 1.55149 * 111.28915 * 190.93620 * 18 17 16 20 20 Si 1.89335 * 101.34632 * 28.58889 * 19 18 17 21 21 C 1.86297 * 111.45654 * 239.14062 * 20 19 18 22 22 C 1.86303 * 111.51326 * 114.15830 * 20 19 18 23 23 C 1.55914 * 109.47092 * 274.71881 * 17 16 15 24 24 N 1.33369 * 109.01759 * 359.57967 * 16 15 14 25 25 N 1.28763 * 109.93931 * 0.26645 * 24 16 15 26 26 H 1.08995 * 109.47287 * 270.21325 * 1 2 3 27 27 H 1.09002 * 109.46533 * 30.21701 * 1 2 3 28 28 H 1.08999 * 109.47332 * 150.21041 * 1 2 3 29 29 H 1.08994 * 109.46978 * 1.58688 * 4 3 2 30 30 H 0.96700 * 113.99916 * 59.99861 * 5 4 3 31 31 H 1.07998 * 126.61671 * 0.02562 * 15 14 13 32 32 H 1.09000 * 109.42767 * 154.74144 * 17 16 15 33 33 H 1.09003 * 109.12266 * 70.45762 * 18 17 16 34 34 H 1.08995 * 109.03968 * 311.37072 * 18 17 16 35 35 H 1.08993 * 111.04822 * 270.57215 * 19 18 17 36 36 H 1.08998 * 111.08046 * 146.62005 * 19 18 17 37 37 H 1.09008 * 109.47092 * 169.79361 * 21 20 19 38 38 H 1.09000 * 109.47471 * 289.79572 * 21 20 19 39 39 H 1.08998 * 109.47081 * 49.80141 * 21 20 19 40 40 H 1.08998 * 109.47080 * 310.17442 * 22 20 19 41 41 H 1.09002 * 109.47136 * 70.17089 * 22 20 19 42 42 H 1.08997 * 109.47148 * 190.17452 * 22 20 19 43 43 H 1.08998 * 111.42736 * 43.11652 * 23 17 16 44 44 H 1.08997 * 111.42634 * 278.17473 * 23 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2815 1.1042 0.0000 4 6 1.8415 2.5455 -0.0005 5 8 2.3770 3.2074 1.1472 6 14 2.4602 3.3831 -1.5454 7 1 2.0190 2.6134 -2.7363 8 1 1.9108 4.7610 -1.6151 9 1 3.9437 3.4426 -1.5160 10 6 3.5505 0.6530 -0.0057 11 17 4.9802 1.6377 -0.0154 12 7 3.5197 -0.6883 -0.0033 13 6 2.2733 -1.0932 0.0031 14 7 1.8478 -2.4211 0.0077 15 6 2.6370 -3.5331 0.0128 16 6 1.8085 -4.5986 0.0122 17 6 2.2401 -6.0425 0.0133 18 6 3.5253 -6.1920 0.8406 19 6 4.1581 -7.5957 0.6498 20 14 3.5811 -8.0295 -1.1006 21 6 2.5708 -9.5946 -1.1168 22 6 5.0149 -8.1394 -2.2850 23 6 2.5067 -6.5064 -1.4511 24 7 0.5464 -4.1677 0.0162 25 7 0.5218 -2.8804 0.0137 26 1 -0.3633 0.0038 1.0276 27 1 -0.3632 0.8881 -0.5172 28 1 -0.3634 -0.8918 -0.5105 29 1 0.7529 2.5931 0.0275 30 1 3.3432 3.2040 1.1882 31 1 3.7167 -3.5567 0.0143 32 1 1.4527 -6.6559 0.4512 33 1 3.2902 -6.0466 1.8950 34 1 4.2407 -5.4320 0.5266 35 1 3.7651 -8.3045 1.3784 36 1 5.2456 -7.5459 0.7024 37 1 2.1066 -9.7173 -2.0954 38 1 3.2184 -10.4473 -0.9123 39 1 1.7962 -9.5350 -0.3522 40 1 5.6359 -7.2489 -2.1874 41 1 5.6092 -9.0237 -2.0550 42 1 4.6386 -8.2098 -3.3055 43 1 3.0567 -5.7522 -2.0139 44 1 1.5808 -6.7802 -1.9569 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_15713346_17831524.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 06:46:32 Heat of formation + Delta-G solvation = 91.807994 kcal Electronic energy + Delta-G solvation = -27019.578784 eV Core-core repulsion = 23160.113340 eV Total energy + Delta-G solvation = -3859.465444 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 355.110 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -44.01935 -43.09147 -38.39364 -37.82885 -37.31405 -35.62827 -35.26008 -31.81258 -31.25788 -29.48389 -29.19228 -28.51041 -28.44426 -27.18227 -25.29071 -25.01493 -23.13780 -22.33906 -21.59637 -20.61326 -19.38060 -18.71568 -18.05529 -17.42977 -16.67900 -16.49497 -16.41312 -16.14939 -15.81217 -15.75688 -15.36354 -14.91514 -14.67229 -14.41193 -14.26576 -14.01577 -13.96995 -13.78198 -13.56750 -13.46865 -13.42055 -13.30464 -13.16302 -12.85515 -12.83827 -12.51914 -12.38836 -12.36536 -12.27659 -12.03597 -11.90644 -11.48891 -11.30563 -11.19065 -10.90382 -10.86312 -10.78150 -10.45499 -10.09226 -9.36909 -0.50758 0.19136 0.42814 0.46529 0.93867 1.29858 1.31010 1.37550 1.50065 1.55332 1.61343 1.79962 1.82560 1.86067 2.48827 2.84175 3.08868 3.15477 3.29758 3.51759 3.60898 3.70135 3.89344 3.97199 4.01843 4.17959 4.21595 4.29863 4.32018 4.48747 4.54289 4.60097 4.64192 4.68320 4.71064 4.72414 4.72698 4.81829 4.99131 5.04802 5.10687 5.23245 5.36923 5.42034 5.47074 5.51143 5.66110 6.13501 6.16567 6.93042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.059 3.941 2 N -0.427 5.427 3 C -0.005 4.005 4 C -0.052 4.052 5 O -0.525 6.525 6 Si 0.944 3.056 7 H -0.246 1.246 8 H -0.236 1.236 9 H -0.227 1.227 10 C 0.070 3.930 11 Cl 0.015 6.985 12 N -0.459 5.459 13 C 0.454 3.546 14 N -0.302 5.302 15 C 0.068 3.932 16 C -0.020 4.020 17 C -0.003 4.003 18 C -0.111 4.111 19 C -0.396 4.396 20 Si 0.968 3.032 21 C -0.443 4.443 22 C -0.442 4.442 23 C -0.390 4.390 24 N -0.206 5.206 25 N -0.068 5.068 26 H 0.093 0.907 27 H 0.098 0.902 28 H 0.110 0.890 29 H 0.125 0.875 30 H 0.378 0.622 31 H 0.204 0.796 32 H 0.095 0.905 33 H 0.068 0.932 34 H 0.065 0.935 35 H 0.079 0.921 36 H 0.081 0.919 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.071 0.929 40 H 0.071 0.929 41 H 0.069 0.931 42 H 0.069 0.931 43 H 0.080 0.920 44 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.573 -0.065 -1.336 1.455 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.082 4.082 2 N -0.113 5.113 3 C -0.124 4.124 4 C -0.162 4.162 5 O -0.330 6.330 6 Si 0.760 3.240 7 H -0.169 1.169 8 H -0.159 1.159 9 H -0.149 1.149 10 C -0.087 4.087 11 Cl 0.043 6.957 12 N -0.184 5.184 13 C 0.104 3.896 14 N -0.087 5.087 15 C -0.082 4.082 16 C -0.156 4.156 17 C -0.024 4.024 18 C -0.149 4.149 19 C -0.482 4.482 20 Si 1.165 2.835 21 C -0.551 4.551 22 C -0.551 4.551 23 C -0.476 4.476 24 N -0.077 5.077 25 N -0.045 5.045 26 H 0.111 0.889 27 H 0.117 0.883 28 H 0.129 0.871 29 H 0.143 0.857 30 H 0.227 0.773 31 H 0.221 0.779 32 H 0.113 0.887 33 H 0.087 0.913 34 H 0.084 0.916 35 H 0.098 0.902 36 H 0.100 0.900 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.091 0.909 40 H 0.090 0.910 41 H 0.089 0.911 42 H 0.089 0.911 43 H 0.099 0.901 44 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -0.625 0.415 -1.961 2.100 hybrid contribution 0.776 0.067 0.487 0.919 sum 0.151 0.482 -1.474 1.558 Atomic orbital electron populations 1.22555 0.73600 1.06457 1.05564 1.45055 1.08776 1.03659 1.53832 1.21549 0.89203 0.90724 1.10879 1.24687 1.04173 0.86078 1.01246 1.86572 1.26606 1.76325 1.43469 0.85753 0.83090 0.80885 0.74259 1.16938 1.15875 1.14859 1.20110 0.87713 0.88860 1.12053 1.98408 1.36200 1.63931 1.97190 1.69870 1.15615 1.10845 1.22086 1.17942 0.84674 0.79078 1.07922 1.46467 1.08340 1.01588 1.52304 1.23404 0.99853 0.83561 1.01361 1.21631 0.87540 0.97386 1.09059 1.20115 0.98412 0.87540 0.96318 1.21782 0.95228 0.97678 1.00226 1.26456 1.04240 0.99623 1.17879 0.80532 0.67456 0.67470 0.68006 1.26019 1.09130 1.15287 1.04659 1.26012 1.13625 1.04650 1.10768 1.26904 1.09981 1.14503 0.96163 1.74245 1.20613 1.02517 1.10312 1.82120 0.93504 1.04571 1.24346 0.88899 0.88343 0.87110 0.85742 0.77275 0.77915 0.88661 0.91301 0.91581 0.90229 0.89977 0.91118 0.91097 0.90934 0.90999 0.91133 0.91138 0.90127 0.89873 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.10 10.39 59.85 0.62 0.52 16 2 N -0.43 -0.54 3.19 -120.08 -0.38 -0.92 16 3 C -0.01 -0.01 5.44 -81.39 -0.44 -0.45 16 4 C -0.05 0.05 2.86 36.01 0.10 0.16 16 5 O -0.52 0.00 12.88 -35.23 -0.45 -0.45 16 6 Si 0.94 -1.17 26.74 -169.99 -4.55 -5.72 16 7 H -0.25 0.06 7.11 56.52 0.40 0.47 16 8 H -0.24 0.19 7.11 56.52 0.40 0.60 16 9 H -0.23 0.26 5.95 56.52 0.34 0.59 16 10 C 0.07 0.16 7.23 -17.79 -0.13 0.03 16 11 Cl 0.01 0.01 24.92 -51.86 -1.29 -1.28 16 12 N -0.46 -1.64 11.14 -10.86 -0.12 -1.77 16 13 C 0.45 1.38 8.63 -318.50 -2.75 -1.37 16 14 N -0.30 -0.88 3.84 -13.13 -0.05 -0.94 16 15 C 0.07 0.09 10.56 -16.70 -0.18 -0.08 16 16 C -0.02 -0.03 6.04 -83.08 -0.50 -0.54 16 17 C 0.00 0.00 2.62 -89.92 -0.24 -0.23 16 18 C -0.11 0.19 5.18 -25.30 -0.13 0.06 16 19 C -0.40 0.98 5.85 38.29 0.22 1.20 16 20 Si 0.97 -3.19 13.36 -169.99 -2.27 -5.46 16 21 C -0.44 0.91 8.65 101.05 0.87 1.78 16 22 C -0.44 0.96 8.65 101.05 0.87 1.83 16 23 C -0.39 0.62 5.27 38.71 0.20 0.82 16 24 N -0.21 -0.79 12.33 33.15 0.41 -0.39 16 25 N -0.07 -0.24 11.42 60.35 0.69 0.45 16 26 H 0.09 -0.21 8.14 -51.93 -0.42 -0.64 16 27 H 0.10 -0.44 7.23 -51.93 -0.38 -0.81 16 28 H 0.11 -0.10 6.30 -51.93 -0.33 -0.43 16 29 H 0.12 -0.39 6.76 -51.93 -0.35 -0.74 16 30 H 0.38 -0.66 6.94 45.56 0.32 -0.34 16 31 H 0.20 -0.21 7.07 -52.49 -0.37 -0.58 16 32 H 0.10 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.07 -0.16 6.65 -51.93 -0.35 -0.51 16 35 H 0.08 -0.19 8.04 -51.93 -0.42 -0.61 16 36 H 0.08 -0.22 8.04 -51.93 -0.42 -0.63 16 37 H 0.07 -0.13 7.96 -51.92 -0.41 -0.54 16 38 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 41 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 42 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 43 H 0.08 -0.11 8.02 -51.93 -0.42 -0.53 16 44 H 0.08 -0.10 8.06 -51.93 -0.42 -0.51 16 LS Contribution 372.66 15.07 5.62 5.62 Total: 0.00 -6.51 372.66 -9.60 -16.11 By element: Atomic # 1 Polarization: -3.26 SS G_CDS: -5.73 Total: -8.99 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: -1.47 Total: 3.74 kcal Atomic # 7 Polarization: -4.11 SS G_CDS: 0.54 Total: -3.57 kcal Atomic # 8 Polarization: 0.00 SS G_CDS: -0.45 Total: -0.45 kcal Atomic # 14 Polarization: -4.36 SS G_CDS: -6.82 Total: -11.18 kcal Atomic # 17 Polarization: 0.01 SS G_CDS: -1.29 Total: -1.28 kcal Total LS contribution 5.62 Total: 5.62 kcal Total: -6.51 -9.60 -16.11 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_15713346_17831524.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.919 kcal (2) G-P(sol) polarization free energy of solvation -6.509 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.410 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.602 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.111 kcal (6) G-S(sol) free energy of system = (1) + (5) 91.808 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds