Wall clock time and date at job start Mon Mar 8 2021 08:47:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00905 * 1 3 3 H 1.00896 * 109.46502 * 1 2 4 4 H 1.00896 * 109.47132 * 239.99931 * 1 2 3 5 5 C 1.46898 * 109.47216 * 119.99478 * 1 2 3 6 6 H 1.09000 * 109.47541 * 300.00598 * 5 1 2 7 7 C 1.52999 * 109.47015 * 60.00521 * 5 1 2 8 8 C 1.53001 * 109.47126 * 180.02562 * 7 5 1 9 9 C 1.52999 * 109.47105 * 299.99721 * 8 7 5 10 10 H 1.09000 * 109.47202 * 300.00495 * 9 8 7 11 11 O 1.42897 * 109.47563 * 180.02562 * 9 8 7 12 12 C 1.42895 * 114.00522 * 150.00091 * 11 9 8 13 13 C 1.50695 * 109.47454 * 180.02562 * 12 11 9 14 14 C 1.35368 * 126.72979 * 0.02562 * 13 12 11 15 15 N 1.36122 * 106.05255 * 180.02562 * 14 13 12 16 16 C 1.40244 * 125.94328 * 179.97438 * 15 14 13 17 17 C 1.38799 * 120.06627 * 185.27854 * 16 15 14 18 18 C 1.38139 * 119.93625 * 180.25466 * 17 16 15 19 19 C 1.50706 * 119.97004 * 179.74800 * 18 17 16 20 20 O 1.42895 * 109.46938 * 64.71817 * 19 18 17 21 21 Si 1.86301 * 109.47233 * 184.72163 * 19 18 17 22 22 C 1.38258 * 120.06629 * 359.46645 * 18 17 16 23 23 C 1.38300 * 120.12736 * 0.26010 * 22 18 17 24 24 C 1.38100 * 120.06468 * 0.02562 * 23 22 18 25 25 N 1.28729 * 108.11400 * 0.26537 * 15 14 13 26 26 N 1.28609 * 110.23409 * 359.55466 * 25 15 14 27 27 C 1.53005 * 109.47111 * 59.99954 * 9 8 7 28 28 C 1.52998 * 109.46949 * 300.00291 * 27 9 8 29 29 H 1.08996 * 109.47502 * 60.00083 * 7 5 1 30 30 H 1.08999 * 109.47230 * 300.00100 * 7 5 1 31 31 H 1.09003 * 109.47199 * 180.02562 * 8 7 5 32 32 H 1.09000 * 109.47494 * 60.00037 * 8 7 5 33 33 H 1.09002 * 109.46794 * 60.00100 * 12 11 9 34 34 H 1.09004 * 109.47066 * 300.00356 * 12 11 9 35 35 H 1.08001 * 126.97808 * 0.02562 * 14 13 12 36 36 H 1.08010 * 120.03306 * 359.97405 * 17 16 15 37 37 H 1.09001 * 109.46953 * 304.71855 * 19 18 17 38 38 H 0.96696 * 114.00485 * 60.00759 * 20 19 18 39 39 H 1.48498 * 109.99815 * 179.97438 * 21 19 18 40 40 H 1.48492 * 109.99988 * 301.31687 * 21 19 18 41 41 H 1.07996 * 119.93855 * 180.23491 * 22 18 17 42 42 H 1.07999 * 119.96800 * 180.02562 * 23 22 18 43 43 H 1.07997 * 120.02963 * 180.02562 * 24 23 22 44 44 H 1.09000 * 109.46786 * 59.99663 * 27 9 8 45 45 H 1.08999 * 109.47441 * 179.97438 * 27 9 8 46 46 H 1.09000 * 109.47372 * 299.99464 * 28 27 9 47 47 H 1.09010 * 109.47041 * 179.97438 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3362 0.9513 0.0000 4 1 -0.3363 -0.4756 0.8238 5 6 -0.4897 -0.6924 -1.1995 6 1 -0.1263 -0.1786 -2.0895 7 6 0.0202 -2.1349 -1.1995 8 6 -0.4893 -2.8559 -2.4491 9 6 -2.0193 -2.8558 -2.4498 10 1 -2.3830 -3.3697 -1.5600 11 8 -2.4952 -3.5297 -3.6166 12 6 -3.7549 -4.1804 -3.4388 13 6 -4.1578 -4.8550 -4.7247 14 6 -3.4620 -4.8655 -5.8859 15 7 -4.2069 -5.5910 -6.7644 16 6 -3.8715 -5.8644 -8.0984 17 6 -4.7731 -6.5263 -8.9205 18 6 -4.4379 -6.7989 -10.2326 19 6 -5.4140 -7.5225 -11.1241 20 8 -6.5756 -6.7125 -11.3149 21 14 -4.6156 -7.8614 -12.7729 22 6 -3.2102 -6.4034 -10.7304 23 6 -2.3121 -5.7387 -9.9153 24 6 -2.6393 -5.4687 -8.6011 25 7 -5.2755 -5.9774 -6.1595 26 7 -5.2733 -5.5605 -4.9429 27 6 -2.5292 -1.4132 -2.4497 28 6 -2.0197 -0.6923 -1.2001 29 1 -0.3432 -2.6488 -0.3096 30 1 1.1102 -2.1350 -1.1995 31 1 -0.1264 -3.8837 -2.4490 32 1 -0.1255 -2.3419 -3.3389 33 1 -4.5090 -3.4431 -3.1632 34 1 -3.6702 -4.9264 -2.6486 35 1 -2.5093 -4.3940 -6.0767 36 1 -5.7340 -6.8319 -8.5333 37 1 -5.7009 -8.4655 -10.6588 38 1 -6.3949 -5.8561 -11.7258 39 1 -5.5677 -8.5753 -13.6611 40 1 -4.1910 -6.5858 -13.4034 41 1 -2.9519 -6.6142 -11.7576 42 1 -1.3540 -5.4306 -10.3070 43 1 -1.9377 -4.9492 -7.9653 44 1 -2.1654 -0.8993 -3.3394 45 1 -3.6192 -1.4131 -2.4506 46 1 -2.3834 -1.2062 -0.3104 47 1 -2.3826 0.3356 -1.2003 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_16485582_12385520.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:47:01 Heat of formation + Delta-G solvation = 170.518139 kcal Electronic energy + Delta-G solvation = -27800.887351 eV Core-core repulsion = 23878.628151 eV Total energy + Delta-G solvation = -3922.259200 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.176 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -45.27054 -43.50285 -41.54279 -40.83740 -38.58905 -37.99446 -36.46421 -34.07571 -33.98886 -33.20751 -32.01950 -31.46953 -28.81076 -27.55378 -26.28088 -26.11402 -25.42207 -24.28879 -23.53974 -22.76408 -22.69897 -21.38150 -21.24577 -20.21809 -19.94421 -19.16011 -18.80360 -18.53201 -18.25059 -18.00816 -17.68673 -17.29732 -16.99876 -16.93783 -16.60238 -16.56978 -16.12044 -15.97443 -15.67134 -15.57246 -15.25957 -15.07137 -14.83249 -14.72863 -14.62761 -14.21955 -14.11579 -13.91840 -13.75788 -13.64352 -13.35733 -13.18257 -12.77252 -12.75425 -12.72395 -12.30224 -12.03747 -11.31929 -11.07688 -10.85633 -10.44189 -5.55449 -1.24838 -1.24731 -0.67130 0.13446 0.38331 0.61389 0.63545 0.66297 0.66818 0.76766 0.93980 0.98704 1.41174 1.44622 1.54147 1.65514 1.73786 2.00064 2.01399 2.15745 2.28780 2.35579 2.42429 2.51401 2.59077 2.69882 2.77270 2.77885 2.82457 2.89843 2.96362 3.03529 3.12023 3.18228 3.26369 3.27726 3.29716 3.31983 3.41208 3.52138 3.57934 3.59020 3.79015 3.91120 4.01023 4.08820 4.35556 4.41492 4.47330 4.69740 4.80382 5.04272 5.76618 6.62110 Molecular weight = 332.18amu Principal moments of inertia in cm(-1) A = 0.026465 B = 0.002109 C = 0.002013 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1057.737028 B =13272.972937 C =13908.293784 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.637 5.637 2 H 0.437 0.563 3 H 0.437 0.563 4 H 0.434 0.566 5 C 0.023 3.977 6 H 0.144 0.856 7 C -0.139 4.139 8 C -0.117 4.117 9 C 0.088 3.912 10 H 0.072 0.928 11 O -0.375 6.375 12 C 0.156 3.844 13 C -0.028 4.028 14 C -0.021 4.021 15 N -0.240 5.240 16 C 0.115 3.885 17 C -0.072 4.072 18 C -0.095 4.095 19 C -0.079 4.079 20 O -0.525 6.525 21 Si 0.691 3.309 22 C -0.105 4.105 23 C -0.091 4.091 24 C -0.111 4.111 25 N -0.065 5.065 26 N -0.249 5.249 27 C -0.144 4.144 28 C -0.140 4.140 29 H 0.091 0.909 30 H 0.096 0.904 31 H 0.094 0.906 32 H 0.086 0.914 33 H 0.075 0.925 34 H 0.077 0.923 35 H 0.197 0.803 36 H 0.147 0.853 37 H 0.124 0.876 38 H 0.377 0.623 39 H -0.252 1.252 40 H -0.257 1.257 41 H 0.140 0.860 42 H 0.145 0.855 43 H 0.137 0.863 44 H 0.086 0.914 45 H 0.089 0.911 46 H 0.090 0.910 47 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 21.263 22.007 27.059 40.848 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.034 5.034 2 H 0.266 0.734 3 H 0.266 0.734 4 H 0.262 0.738 5 C -0.080 4.080 6 H 0.162 0.838 7 C -0.177 4.177 8 C -0.155 4.155 9 C 0.030 3.970 10 H 0.090 0.910 11 O -0.293 6.293 12 C 0.078 3.922 13 C -0.165 4.165 14 C -0.169 4.169 15 N -0.027 5.027 16 C 0.025 3.975 17 C -0.092 4.092 18 C -0.096 4.096 19 C -0.189 4.189 20 O -0.331 6.331 21 Si 0.591 3.409 22 C -0.124 4.124 23 C -0.109 4.109 24 C -0.132 4.132 25 N -0.043 5.043 26 N -0.117 5.117 27 C -0.183 4.183 28 C -0.178 4.178 29 H 0.109 0.891 30 H 0.114 0.886 31 H 0.113 0.887 32 H 0.104 0.896 33 H 0.093 0.907 34 H 0.095 0.905 35 H 0.214 0.786 36 H 0.165 0.835 37 H 0.142 0.858 38 H 0.225 0.775 39 H -0.177 1.177 40 H -0.182 1.182 41 H 0.157 0.843 42 H 0.162 0.838 43 H 0.154 0.846 44 H 0.104 0.896 45 H 0.108 0.892 46 H 0.108 0.892 47 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges 19.604 20.714 25.992 38.587 hybrid contribution 0.376 1.856 0.672 2.009 sum 19.980 22.570 26.664 40.244 Atomic orbital electron populations 1.42651 1.21224 1.20703 1.18815 0.73397 0.73400 0.73797 1.23595 0.99596 0.97555 0.87288 0.83792 1.22054 1.02847 0.90768 1.01993 1.21520 0.94055 1.03067 0.96842 1.22114 0.93972 0.91745 0.89216 0.90989 1.87842 1.36664 1.69804 1.35017 1.20312 0.85055 0.95196 0.91636 1.21452 0.94418 1.04327 0.96303 1.23426 1.01613 1.02190 0.89625 1.44698 1.14537 1.33728 1.09740 1.17676 0.96320 1.03687 0.79857 1.20877 0.99444 0.96438 0.92453 1.20296 0.95724 0.99295 0.94297 1.25143 0.89361 0.96495 1.07858 1.86662 1.30766 1.32638 1.83010 0.94957 0.85974 0.84764 0.75178 1.21367 0.93230 0.97147 1.00607 1.21031 1.00135 0.97555 0.92202 1.20943 0.94232 1.01076 0.96949 1.78491 1.05474 1.19375 1.00981 1.75095 1.18550 1.11286 1.06806 1.22049 1.03218 0.96026 0.96963 1.22045 0.89478 1.04141 1.02089 0.89079 0.88565 0.88715 0.89571 0.90680 0.90469 0.78603 0.83493 0.85775 0.77524 1.17669 1.18236 0.84257 0.83756 0.84553 0.89558 0.89233 0.89152 0.88818 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.64 24.29 4.15 -4.67 -0.02 24.27 16 2 H 0.44 -17.36 8.96 -39.29 -0.35 -17.71 16 3 H 0.44 -17.31 8.96 -39.29 -0.35 -17.66 16 4 H 0.43 -16.97 8.90 -39.29 -0.35 -17.32 16 5 C 0.02 -0.75 3.02 -67.71 -0.20 -0.96 16 6 H 0.14 -4.62 8.14 -51.93 -0.42 -5.04 16 7 C -0.14 3.94 5.43 -26.73 -0.15 3.80 16 8 C -0.12 2.65 5.57 -26.73 -0.15 2.50 16 9 C 0.09 -1.79 2.61 -26.73 -0.07 -1.86 16 10 H 0.07 -1.51 7.79 -51.93 -0.40 -1.91 16 11 O -0.37 5.78 9.37 -35.23 -0.33 5.45 16 12 C 0.16 -2.02 6.37 36.00 0.23 -1.79 16 13 C -0.03 0.23 7.22 -82.77 -0.60 -0.36 16 14 C -0.02 0.18 10.25 -16.67 -0.17 0.01 16 15 N -0.24 1.46 3.56 -10.47 -0.04 1.43 16 16 C 0.12 -0.82 6.67 -83.58 -0.56 -1.38 16 17 C -0.07 0.46 9.25 -39.41 -0.36 0.10 16 18 C -0.10 0.74 5.35 -104.65 -0.56 0.18 16 19 C -0.08 0.58 2.80 36.01 0.10 0.68 16 20 O -0.52 2.82 12.83 -35.23 -0.45 2.37 16 21 Si 0.69 -5.53 29.88 -169.99 -5.08 -10.61 16 22 C -0.11 0.99 8.67 -39.55 -0.34 0.65 16 23 C -0.09 0.95 10.04 -39.61 -0.40 0.55 16 24 C -0.11 1.10 9.46 -39.41 -0.37 0.73 16 25 N -0.07 0.21 12.42 60.35 0.75 0.96 16 26 N -0.25 1.01 12.39 33.29 0.41 1.43 16 27 C -0.14 3.23 5.54 -26.73 -0.15 3.08 16 28 C -0.14 3.93 5.43 -26.73 -0.15 3.78 16 29 H 0.09 -2.61 8.14 -51.93 -0.42 -3.03 16 30 H 0.10 -2.80 8.14 -51.93 -0.42 -3.22 16 31 H 0.09 -1.94 8.14 -51.93 -0.42 -2.36 16 32 H 0.09 -1.90 8.14 -51.93 -0.42 -2.32 16 33 H 0.08 -1.05 7.87 -51.93 -0.41 -1.46 16 34 H 0.08 -1.05 8.08 -51.93 -0.42 -1.47 16 35 H 0.20 -2.45 7.01 -52.49 -0.37 -2.81 16 36 H 0.15 -0.75 7.70 -52.48 -0.40 -1.16 16 37 H 0.12 -0.96 7.96 -51.93 -0.41 -1.38 16 38 H 0.38 -3.18 8.70 45.56 0.40 -2.78 16 39 H -0.25 0.99 7.11 56.52 0.40 1.39 16 40 H -0.26 1.68 7.01 56.52 0.40 2.08 16 41 H 0.14 -1.51 4.83 -52.49 -0.25 -1.77 16 42 H 0.14 -1.87 8.06 -52.49 -0.42 -2.29 16 43 H 0.14 -1.72 6.79 -52.49 -0.36 -2.08 16 44 H 0.09 -1.85 8.14 -51.93 -0.42 -2.27 16 45 H 0.09 -1.80 7.87 -51.93 -0.41 -2.21 16 46 H 0.09 -2.57 8.14 -51.93 -0.42 -2.99 16 47 H 0.09 -2.68 8.14 -51.92 -0.42 -3.10 16 LS Contribution 377.04 15.07 5.68 5.68 Total: 1.00 -44.13 377.04 -10.07 -54.20 By element: Atomic # 1 Polarization: -87.77 SS G_CDS: -7.10 Total: -94.87 kcal Atomic # 6 Polarization: 13.60 SS G_CDS: -3.90 Total: 9.70 kcal Atomic # 7 Polarization: 26.97 SS G_CDS: 1.11 Total: 28.08 kcal Atomic # 8 Polarization: 8.60 SS G_CDS: -0.78 Total: 7.82 kcal Atomic # 14 Polarization: -5.53 SS G_CDS: -5.08 Total: -10.61 kcal Total LS contribution 5.68 Total: 5.68 kcal Total: -44.13 -10.07 -54.20 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_16485582_12385520.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 224.716 kcal (2) G-P(sol) polarization free energy of solvation -44.126 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 180.590 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.072 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -54.198 kcal (6) G-S(sol) free energy of system = (1) + (5) 170.518 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds