Wall clock time and date at job start Mon Mar 8 2021 09:55:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86302 * 109.47310 * 2 1 4 4 C 1.50698 * 109.47106 * 120.00277 * 2 1 3 5 5 C 1.38258 * 119.96580 * 244.97574 * 4 2 1 6 6 C 1.38294 * 120.13384 * 180.02562 * 5 4 2 7 7 C 1.38111 * 120.06304 * 359.69998 * 6 5 4 8 8 C 1.38845 * 119.93151 * 0.57416 * 7 6 5 9 9 N 1.40247 * 120.06436 * 179.71998 * 8 7 6 10 10 C 1.36120 * 125.94240 * 0.02562 * 9 8 7 11 11 C 1.35367 * 106.04960 * 180.18154 * 10 9 8 12 12 C 1.50695 * 126.73332 * 179.85253 * 11 10 9 13 13 H 1.08998 * 109.47678 * 154.70725 * 12 11 10 14 14 C 1.53002 * 109.47445 * 274.71406 * 12 11 10 15 15 C 1.52997 * 109.47369 * 179.97438 * 14 12 11 16 16 C 1.52994 * 109.47404 * 300.00003 * 15 14 12 17 17 H 1.09008 * 109.46970 * 299.99951 * 16 15 14 18 18 C 1.52997 * 109.47404 * 180.02562 * 16 15 14 19 19 O 1.42898 * 109.47319 * 174.99993 * 18 16 15 20 20 C 1.53001 * 109.47368 * 59.99530 * 16 15 14 21 21 C 1.52997 * 109.47242 * 300.00569 * 20 16 15 22 22 N 1.33780 * 106.53738 * 359.59154 * 11 10 9 23 23 N 1.28605 * 109.05823 * 0.26019 * 22 11 10 24 24 C 1.38143 * 119.97014 * 65.00127 * 4 2 1 25 25 H 0.96699 * 114.00703 * 59.99977 * 1 2 3 26 26 H 1.09003 * 109.47166 * 240.00245 * 2 1 3 27 27 H 1.48503 * 109.99841 * 298.68259 * 3 2 1 28 28 H 1.48498 * 109.99976 * 59.99984 * 3 2 1 29 29 H 1.08004 * 119.93251 * 359.97438 * 5 4 2 30 30 H 1.07999 * 119.97546 * 179.97438 * 6 5 4 31 31 H 1.07996 * 120.03537 * 180.29679 * 7 6 5 32 32 H 1.08004 * 126.97468 * 0.06270 * 10 9 8 33 33 H 1.08995 * 109.46734 * 59.99076 * 14 12 11 34 34 H 1.09002 * 109.46264 * 300.00012 * 14 12 11 35 35 H 1.09000 * 109.46875 * 179.97438 * 15 14 12 36 36 H 1.09008 * 109.47017 * 59.99925 * 15 14 12 37 37 H 1.09002 * 109.47153 * 54.99686 * 18 16 15 38 38 H 1.09001 * 109.46832 * 294.99876 * 18 16 15 39 39 H 0.96701 * 113.99881 * 180.02562 * 19 18 16 40 40 H 1.09008 * 109.46731 * 60.00275 * 20 16 15 41 41 H 1.08998 * 109.47430 * 180.02562 * 20 16 15 42 42 H 1.08998 * 109.46934 * 299.99660 * 21 20 16 43 43 H 1.09000 * 109.47325 * 179.97438 * 21 20 16 44 44 H 1.07998 * 120.03461 * 359.97173 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7105 1.2304 5 6 2.6391 -0.0117 2.1907 6 6 3.1022 -0.6603 3.3209 7 6 2.8532 -2.0074 3.4964 8 6 2.1475 -2.7130 2.5310 9 7 1.8982 -4.0823 2.7036 10 6 2.2895 -4.8380 3.7660 11 6 1.8438 -6.0919 3.5178 12 6 2.0254 -7.3032 4.3956 13 1 1.2276 -8.0189 4.1970 14 6 3.3785 -7.9517 4.0965 15 6 3.5631 -9.1812 4.9882 16 6 3.5144 -8.7576 6.4575 17 1 4.3122 -8.0418 6.6559 18 6 3.6996 -9.9870 7.3492 19 8 3.7707 -9.5775 8.7164 20 6 2.1613 -8.1090 6.7568 21 6 1.9767 -6.8796 5.8651 22 7 1.2055 -6.0436 2.3431 23 7 1.2552 -4.8420 1.8873 24 6 1.6845 -2.0594 1.3975 25 1 -0.3934 0.4417 -0.7650 26 1 1.7923 -0.5138 -0.8900 27 1 1.5878 2.4586 -1.2242 28 1 1.5615 2.4679 1.2085 29 1 2.8316 1.0427 2.0575 30 1 3.6552 -0.1121 4.0692 31 1 3.2109 -2.5124 4.3815 32 1 2.8447 -4.5052 4.6306 33 1 4.1762 -7.2360 4.2952 34 1 3.4133 -8.2531 3.0496 35 1 4.5269 -9.6434 4.7747 36 1 2.7653 -9.8970 4.7898 37 1 4.6219 -10.4992 7.0749 38 1 2.8551 -10.6631 7.2159 39 1 3.8886 -10.3072 9.3399 40 1 1.3635 -8.8249 6.5584 41 1 2.1268 -7.8068 7.8034 42 1 2.7745 -6.1638 6.0635 43 1 1.0126 -6.4178 6.0779 44 1 1.1314 -2.6047 0.6471 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_273910_16485582_14775216.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:55:52 Heat of formation + Delta-G solvation = 37.899845 kcal Electronic energy + Delta-G solvation = -25782.802398 eV Core-core repulsion = 22089.411706 eV Total energy + Delta-G solvation = -3693.390692 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 316.157 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.43316 -40.83199 -40.00836 -37.97787 -37.47317 -35.73025 -33.91193 -32.83164 -31.76648 -31.31369 -30.64350 -27.23037 -26.54219 -25.52341 -24.01960 -23.58964 -22.63036 -21.94164 -21.37590 -20.57793 -19.20566 -18.65559 -18.22393 -17.71516 -17.44063 -16.81086 -16.51097 -16.34436 -16.00885 -15.68407 -15.37994 -15.18250 -14.99510 -14.83417 -14.76565 -14.21804 -14.00228 -13.87672 -13.60860 -13.52471 -13.16269 -13.08412 -12.88800 -12.56861 -12.26296 -12.23071 -12.10809 -11.93625 -11.84527 -11.73613 -11.44507 -11.22915 -11.15803 -10.83160 -10.67459 -10.20832 -10.15532 -9.68121 -5.08616 -0.51552 0.00316 0.92227 1.08778 1.26673 1.48427 1.55439 1.83772 2.39030 3.08651 3.12803 3.24497 3.38504 3.58348 3.66420 3.70159 3.74125 3.86790 3.92333 3.96783 4.07317 4.09559 4.14005 4.19075 4.30837 4.39024 4.40349 4.44445 4.50133 4.52321 4.59921 4.64164 4.70422 4.72386 4.85526 4.97418 5.01241 5.04241 5.13066 5.14833 5.15767 5.18880 5.28297 5.29896 5.41682 5.43705 5.51152 5.80491 6.31842 6.68433 7.50567 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.080 4.080 3 Si 0.688 3.312 4 C -0.052 4.052 5 C -0.107 4.107 6 C -0.090 4.090 7 C -0.113 4.113 8 C 0.123 3.877 9 N -0.243 5.243 10 C -0.046 4.046 11 C -0.003 4.003 12 C -0.002 4.002 13 H 0.092 0.908 14 C -0.107 4.107 15 C -0.113 4.113 16 C -0.088 4.088 17 H 0.078 0.922 18 C 0.078 3.922 19 O -0.574 6.574 20 C -0.109 4.109 21 C -0.112 4.112 22 N -0.256 5.256 23 N -0.076 5.076 24 C -0.074 4.074 25 H 0.383 0.617 26 H 0.081 0.919 27 H -0.258 1.258 28 H -0.253 1.253 29 H 0.138 0.862 30 H 0.145 0.855 31 H 0.138 0.862 32 H 0.192 0.808 33 H 0.065 0.935 34 H 0.069 0.931 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.045 0.955 38 H 0.046 0.954 39 H 0.380 0.620 40 H 0.063 0.937 41 H 0.073 0.927 42 H 0.065 0.935 43 H 0.067 0.933 44 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.215 1.862 1.731 5.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.189 4.189 3 Si 0.589 3.411 4 C -0.053 4.053 5 C -0.125 4.125 6 C -0.108 4.108 7 C -0.134 4.134 8 C 0.032 3.968 9 N -0.030 5.030 10 C -0.193 4.193 11 C -0.139 4.139 12 C -0.022 4.022 13 H 0.110 0.890 14 C -0.145 4.145 15 C -0.150 4.150 16 C -0.107 4.107 17 H 0.097 0.903 18 C 0.000 4.000 19 O -0.380 6.380 20 C -0.147 4.147 21 C -0.150 4.150 22 N -0.122 5.122 23 N -0.054 5.054 24 C -0.094 4.094 25 H 0.232 0.768 26 H 0.099 0.901 27 H -0.183 1.183 28 H -0.177 1.177 29 H 0.155 0.845 30 H 0.163 0.837 31 H 0.156 0.844 32 H 0.209 0.791 33 H 0.084 0.916 34 H 0.088 0.912 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.063 0.937 38 H 0.064 0.936 39 H 0.227 0.773 40 H 0.082 0.918 41 H 0.092 0.908 42 H 0.084 0.916 43 H 0.086 0.914 44 H 0.163 0.837 Dipole moment (debyes) X Y Z Total from point charges 4.231 2.842 0.651 5.138 hybrid contribution -0.500 -0.615 0.642 1.020 sum 3.731 2.227 1.293 4.533 Atomic orbital electron populations 1.86593 1.17354 1.80278 1.49942 1.24861 0.84908 1.11294 0.97859 0.95037 0.91413 0.74054 0.80601 1.19158 0.97830 0.92778 0.95546 1.21227 0.97619 1.00177 0.93474 1.20990 0.99051 0.93155 0.97636 1.20977 0.99014 0.95066 0.98362 1.17658 1.02467 0.78885 0.97828 1.44628 1.35664 1.08001 1.14678 1.23491 1.08140 0.91802 0.95895 1.22007 1.01185 0.95347 0.95404 1.19537 0.99159 0.91573 0.91944 0.88970 1.21534 0.95863 0.97084 0.99986 1.21522 1.02427 0.97751 0.93342 1.21181 0.98895 0.96865 0.93744 0.90348 1.22247 0.99619 0.96270 0.81848 1.86466 1.96618 1.38115 1.16752 1.21513 0.96429 0.96779 0.99959 1.21629 1.02281 0.98262 0.92872 1.75106 1.17543 1.09993 1.09604 1.78396 1.13699 0.96546 1.16731 1.20812 0.98158 0.94148 0.96307 0.76849 0.90061 1.18335 1.17724 0.84476 0.83750 0.84433 0.79082 0.91624 0.91216 0.91366 0.91354 0.93659 0.93583 0.77320 0.91821 0.90792 0.91636 0.91433 0.83724 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.52 12.81 -35.23 -0.45 -0.97 16 2 C -0.08 0.05 2.79 36.00 0.10 0.15 16 3 Si 0.69 -1.36 29.85 -169.99 -5.07 -6.44 16 4 C -0.05 -0.02 5.38 -104.65 -0.56 -0.59 16 5 C -0.11 0.13 8.67 -39.55 -0.34 -0.21 16 6 C -0.09 0.19 10.04 -39.61 -0.40 -0.21 16 7 C -0.11 0.11 9.46 -39.40 -0.37 -0.26 16 8 C 0.12 0.22 6.68 -83.57 -0.56 -0.34 16 9 N -0.24 -0.82 3.56 -10.47 -0.04 -0.85 16 10 C -0.05 -0.07 10.09 -16.67 -0.17 -0.23 16 11 C 0.00 -0.01 6.16 -82.77 -0.51 -0.52 16 12 C 0.00 0.00 2.65 -91.77 -0.24 -0.24 16 13 H 0.09 0.10 8.14 -51.93 -0.42 -0.32 16 14 C -0.11 0.04 5.19 -26.73 -0.14 -0.10 16 15 C -0.11 0.14 5.20 -26.74 -0.14 0.00 16 16 C -0.09 0.06 2.43 -90.62 -0.22 -0.16 16 17 H 0.08 0.00 8.14 -51.92 -0.42 -0.42 16 18 C 0.08 -0.06 6.43 37.16 0.24 0.18 16 19 O -0.57 -0.22 13.20 -35.23 -0.46 -0.68 16 20 C -0.11 0.04 5.10 -26.73 -0.14 -0.09 16 21 C -0.11 0.08 4.80 -26.73 -0.13 -0.05 16 22 N -0.26 -1.54 12.40 33.29 0.41 -1.13 16 23 N -0.08 -0.46 12.41 60.35 0.75 0.29 16 24 C -0.07 -0.15 9.25 -39.41 -0.36 -0.52 16 25 H 0.38 -1.17 8.74 45.56 0.40 -0.77 16 26 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 27 H -0.26 -0.07 7.11 56.52 0.40 0.33 16 28 H -0.25 -0.21 7.05 56.52 0.40 0.19 16 29 H 0.14 -0.43 4.86 -52.48 -0.26 -0.68 16 30 H 0.14 -0.69 8.06 -52.49 -0.42 -1.12 16 31 H 0.14 -0.46 6.77 -52.49 -0.36 -0.81 16 32 H 0.19 -0.44 6.53 -52.48 -0.34 -0.79 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 35 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 36 H 0.07 -0.09 8.14 -51.92 -0.42 -0.51 16 37 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.05 -0.06 8.14 -51.93 -0.42 -0.49 16 39 H 0.38 -1.36 9.12 45.56 0.42 -0.94 16 40 H 0.06 -0.02 8.14 -51.92 -0.42 -0.44 16 41 H 0.07 0.05 7.82 -51.93 -0.41 -0.36 16 42 H 0.06 -0.10 7.37 -51.93 -0.38 -0.48 16 43 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 44 H 0.14 0.43 7.69 -52.49 -0.40 0.03 16 LS Contribution 355.03 15.07 5.35 5.35 Total: 0.00 -9.05 355.03 -9.05 -18.11 By element: Atomic # 1 Polarization: -4.88 SS G_CDS: -5.60 Total: -10.47 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -3.94 Total: -3.21 kcal Atomic # 7 Polarization: -2.82 SS G_CDS: 1.12 Total: -1.69 kcal Atomic # 8 Polarization: -0.73 SS G_CDS: -0.92 Total: -1.65 kcal Atomic # 14 Polarization: -1.36 SS G_CDS: -5.07 Total: -6.44 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.05 -9.05 -18.11 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_16485582_14775216.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 56.005 kcal (2) G-P(sol) polarization free energy of solvation -9.050 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.055 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.105 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.900 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds