Wall clock time and date at job start Mon Mar 8 2021 07:11:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00898 * 1 3 3 H 1.00894 * 109.47656 * 1 2 4 4 H 1.00903 * 109.46779 * 239.99830 * 1 2 3 5 5 C 1.46905 * 109.47044 * 120.00449 * 1 2 3 6 6 C 1.53002 * 109.47370 * 179.97438 * 5 1 2 7 7 H 1.09000 * 109.46497 * 55.00095 * 6 5 1 8 8 C 1.52996 * 109.46969 * 174.99935 * 6 5 1 9 9 C 1.53002 * 109.46972 * 180.02562 * 8 6 5 10 10 C 1.52997 * 109.46817 * 299.99733 * 9 8 6 11 11 H 1.09001 * 109.47502 * 300.00518 * 10 9 8 12 12 C 1.50699 * 109.47078 * 180.02562 * 10 9 8 13 13 C 1.34962 * 125.49270 * 324.71713 * 12 10 9 14 14 N 1.36302 * 106.78064 * 179.90374 * 13 12 10 15 15 C 1.40026 * 126.86249 * 180.11494 * 14 13 12 16 16 C 1.39315 * 120.84319 * 180.26250 * 15 14 13 17 17 C 1.50698 * 120.44506 * 359.97438 * 16 15 14 18 18 O 1.42897 * 109.47272 * 285.00103 * 17 16 15 19 19 Si 1.86298 * 109.47380 * 164.99922 * 17 16 15 20 20 C 1.38002 * 119.11582 * 179.97438 * 16 15 14 21 21 N 1.31939 * 120.84368 * 359.97438 * 20 16 15 22 22 C 1.32035 * 121.86442 * 0.02562 * 21 20 16 23 23 Cl 1.73602 * 119.60727 * 180.02562 * 22 21 20 24 24 C 1.38177 * 120.79573 * 359.71868 * 22 21 20 25 25 N 1.40313 * 106.26904 * 0.35172 * 14 13 12 26 26 N 1.28772 * 108.01302 * 359.77639 * 25 14 13 27 27 C 1.53006 * 109.47127 * 60.00361 * 10 9 8 28 28 C 1.52997 * 109.47143 * 294.99865 * 6 5 1 29 29 H 1.09000 * 109.47134 * 59.99274 * 5 1 2 30 30 H 1.09002 * 109.46785 * 299.99444 * 5 1 2 31 31 H 1.08996 * 109.47452 * 59.99938 * 8 6 5 32 32 H 1.09000 * 109.47054 * 300.00097 * 8 6 5 33 33 H 1.09002 * 109.47070 * 179.97438 * 9 8 6 34 34 H 1.08996 * 109.47407 * 59.99513 * 9 8 6 35 35 H 1.08007 * 126.60889 * 0.04164 * 13 12 10 36 36 H 1.09005 * 109.47392 * 45.00013 * 17 16 15 37 37 H 0.96702 * 113.99932 * 299.99901 * 18 17 16 38 38 H 1.48502 * 110.00063 * 180.02562 * 19 17 16 39 39 H 1.48501 * 110.00153 * 301.32014 * 19 17 16 40 40 H 1.08001 * 119.57764 * 179.97438 * 20 16 15 41 41 H 1.07988 * 120.46750 * 180.28553 * 24 22 21 42 42 H 1.08993 * 109.46955 * 60.00011 * 27 10 9 43 43 H 1.09000 * 109.47050 * 179.97438 * 27 10 9 44 44 H 1.09002 * 109.47153 * 60.00035 * 28 6 5 45 45 H 1.08993 * 109.47194 * 300.00323 * 28 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3364 0.9512 0.0000 4 1 -0.3363 -0.4757 0.8239 5 6 -0.4897 -0.6926 -1.1994 6 6 -2.0197 -0.6932 -1.1992 7 1 -2.3833 0.3304 -1.1095 8 6 -2.5296 -1.3029 -2.5065 9 6 -4.0596 -1.3029 -2.5065 10 6 -4.5696 -2.1303 -1.3249 11 1 -4.2061 -3.1541 -1.4143 12 6 -6.0765 -2.1309 -1.3252 13 6 -6.8604 -1.0968 -1.6963 14 7 -8.1513 -1.5097 -1.5510 15 6 -9.3065 -0.7660 -1.8214 16 6 -10.5717 -1.3139 -1.6216 17 6 -10.7214 -2.7233 -1.1094 18 8 -10.4222 -3.6458 -2.1588 19 14 -12.4710 -2.9902 -0.5278 20 6 -11.6863 -0.5489 -1.8992 21 7 -11.5645 0.6860 -2.3475 22 6 -10.3837 1.2409 -2.5497 23 17 -10.2917 2.8707 -3.1406 24 6 -9.2200 0.5423 -2.2907 25 7 -8.0911 -2.8269 -1.0713 26 7 -6.8505 -3.1514 -0.9534 27 6 -4.0596 -1.5206 -0.0175 28 6 -2.5292 -1.5209 -0.0176 29 1 -0.1262 -1.7202 -1.1994 30 1 -0.1264 -0.1787 -2.0894 31 1 -2.1659 -2.3265 -2.5962 32 1 -2.1666 -0.7133 -3.3483 33 1 -4.4229 -1.7369 -3.4381 34 1 -4.4230 -0.2793 -2.4169 35 1 -6.5288 -0.1294 -2.0437 36 1 -10.0340 -2.8828 -0.2785 37 1 -10.9961 -3.5610 -2.9325 38 1 -12.6314 -4.3763 -0.0196 39 1 -12.8050 -2.0158 0.5418 40 1 -12.6707 -0.9664 -1.7475 41 1 -8.2570 1.0029 -2.4536 42 1 -4.4230 -0.4969 0.0720 43 1 -4.4233 -2.1098 0.8244 44 1 -2.1659 -1.0865 0.9138 45 1 -2.1654 -2.5444 -0.1072 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273910_16521754_17850172.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:11:05 Heat of formation + Delta-G solvation = 180.309823 kcal Electronic energy + Delta-G solvation = -28968.570666 eV Core-core repulsion = 24940.192553 eV Total energy + Delta-G solvation = -4028.378113 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.133 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -43.66135 -41.82798 -40.61799 -38.39448 -38.11314 -37.68102 -36.43378 -33.78533 -33.19576 -32.38916 -31.75695 -30.36973 -27.61356 -26.91411 -25.96560 -24.12861 -23.78672 -23.42510 -22.90897 -21.67384 -20.74519 -19.85789 -18.76452 -18.53325 -18.48277 -17.96172 -17.42995 -17.08763 -16.84776 -16.71110 -16.41985 -16.16517 -15.91096 -15.60208 -15.50916 -15.12051 -15.08811 -14.86175 -14.59794 -13.97087 -13.69282 -13.61155 -13.37967 -13.15754 -12.98492 -12.88497 -12.69214 -12.61977 -12.49406 -12.34588 -12.31338 -12.04949 -11.89758 -11.56402 -11.33305 -11.12865 -11.07608 -10.80230 -10.59945 -10.38982 -10.04139 -5.15518 -1.00348 -0.62255 0.33965 0.50492 0.85469 1.08962 1.28318 1.51059 1.77610 1.87799 2.11320 2.84907 3.03923 3.10117 3.15267 3.27150 3.34920 3.49579 3.54699 3.60263 3.66207 3.75767 3.83631 3.90972 3.94377 3.99019 4.09144 4.19110 4.23425 4.28628 4.39174 4.42065 4.50248 4.54487 4.58954 4.62334 4.70650 4.77496 4.81453 4.86767 4.95992 5.11766 5.12945 5.19833 5.25795 5.30932 5.38497 5.39901 5.53828 6.25135 6.65680 6.88634 Molecular weight = 351.13amu Principal moments of inertia in cm(-1) A = 0.011913 B = 0.003061 C = 0.002558 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2349.713775 B = 9145.155725 C =10943.656143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.626 5.626 2 H 0.451 0.549 3 H 0.445 0.555 4 H 0.438 0.562 5 C 0.010 3.990 6 C -0.108 4.108 7 H 0.116 0.884 8 C -0.113 4.113 9 C -0.116 4.116 10 C -0.003 4.003 11 H 0.073 0.927 12 C -0.038 4.038 13 C 0.034 3.966 14 N -0.329 5.329 15 C 0.213 3.787 16 C -0.172 4.172 17 C -0.057 4.057 18 O -0.538 6.538 19 Si 0.771 3.229 20 C 0.156 3.844 21 N -0.490 5.490 22 C 0.193 3.807 23 Cl -0.004 7.004 24 C -0.154 4.154 25 N -0.066 5.066 26 N -0.263 5.263 27 C -0.112 4.112 28 C -0.127 4.127 29 H 0.132 0.868 30 H 0.145 0.855 31 H 0.066 0.934 32 H 0.088 0.912 33 H 0.049 0.951 34 H 0.087 0.913 35 H 0.240 0.760 36 H 0.108 0.892 37 H 0.391 0.609 38 H -0.297 1.297 39 H -0.278 1.278 40 H 0.202 0.798 41 H 0.192 0.808 42 H 0.078 0.922 43 H 0.040 0.960 44 H 0.102 0.898 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 37.909 9.891 3.954 39.377 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.027 5.027 2 H 0.283 0.717 3 H 0.275 0.725 4 H 0.268 0.732 5 C -0.115 4.115 6 C -0.127 4.127 7 H 0.134 0.866 8 C -0.152 4.152 9 C -0.154 4.154 10 C -0.024 4.024 11 H 0.092 0.908 12 C -0.174 4.174 13 C -0.114 4.114 14 N -0.110 5.110 15 C 0.111 3.889 16 C -0.177 4.177 17 C -0.168 4.168 18 O -0.344 6.344 19 Si 0.675 3.325 20 C -0.001 4.001 21 N -0.202 5.202 22 C 0.029 3.971 23 Cl 0.025 6.975 24 C -0.178 4.178 25 N -0.042 5.042 26 N -0.133 5.133 27 C -0.150 4.150 28 C -0.164 4.164 29 H 0.151 0.849 30 H 0.163 0.837 31 H 0.084 0.916 32 H 0.106 0.894 33 H 0.068 0.932 34 H 0.105 0.895 35 H 0.256 0.744 36 H 0.125 0.875 37 H 0.240 0.760 38 H -0.225 1.225 39 H -0.204 1.204 40 H 0.218 0.782 41 H 0.209 0.791 42 H 0.097 0.903 43 H 0.059 0.941 44 H 0.120 0.880 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 36.262 8.742 5.035 37.639 hybrid contribution 0.883 0.144 0.204 0.918 sum 37.145 8.887 5.239 38.551 Atomic orbital electron populations 1.42182 1.22092 1.20986 1.17408 0.71719 0.72470 0.73200 1.23475 0.95170 1.03528 0.89301 1.21631 0.93550 1.02504 0.94998 0.86597 1.21482 0.93382 1.02364 0.97927 1.21650 0.97516 1.00428 0.95775 1.19742 0.83049 1.01520 0.98076 0.90834 1.22376 0.99562 0.89243 1.06207 1.24040 0.81581 1.03489 1.02284 1.47947 1.05226 1.12236 1.45595 1.17601 0.84375 0.90085 0.96844 1.21480 0.92419 0.99942 1.03872 1.25117 1.12898 0.84393 0.94391 1.86642 1.62118 1.56213 1.29465 0.94291 0.75410 0.77612 0.85187 1.22859 0.98843 0.87159 0.91227 1.67145 1.26965 1.12750 1.13298 1.21609 0.89290 0.89877 0.96337 1.98473 1.97930 1.15608 1.85489 1.21705 1.01458 0.91697 1.02916 1.82506 1.12234 0.90907 1.18532 1.74385 0.98437 1.26315 1.14139 1.21562 0.97752 1.01263 0.94469 1.21849 0.93556 1.01967 0.99050 0.84943 0.83717 0.91558 0.89379 0.93194 0.89454 0.74434 0.87500 0.76028 1.22500 1.20409 0.78228 0.79133 0.90285 0.94132 0.87956 0.90891 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.63 49.34 4.48 -186.70 -0.84 48.51 16 2 H 0.45 -37.15 9.03 -89.70 -0.81 -37.96 16 3 H 0.45 -36.36 8.96 -89.70 -0.80 -37.16 16 4 H 0.44 -34.77 7.26 -89.69 -0.65 -35.42 16 5 C 0.01 -0.71 6.01 86.30 0.52 -0.19 16 6 C -0.11 6.23 2.35 -10.79 -0.03 6.20 16 7 H 0.12 -7.03 8.14 -2.39 -0.02 -7.05 16 8 C -0.11 5.29 5.20 30.59 0.16 5.45 16 9 C -0.12 4.37 4.78 30.59 0.15 4.51 16 10 C 0.00 0.10 2.64 -11.54 -0.03 0.07 16 11 H 0.07 -1.99 8.14 -2.39 -0.02 -2.01 16 12 C -0.04 0.80 6.04 41.57 0.25 1.05 16 13 C 0.03 -0.82 10.09 83.24 0.84 0.02 16 14 N -0.33 5.09 3.85 -186.67 -0.72 4.37 16 15 C 0.21 -3.47 6.73 38.34 0.26 -3.22 16 16 C -0.17 2.60 5.28 -19.66 -0.10 2.49 16 17 C -0.06 0.74 1.77 71.24 0.13 0.86 16 18 O -0.54 6.18 11.89 -148.98 -1.77 4.41 16 19 Si 0.77 -11.28 29.96 68.60 2.06 -9.23 16 20 C 0.16 -2.53 9.83 84.62 0.83 -1.70 16 21 N -0.49 6.31 10.34 -186.89 -1.93 4.38 16 22 C 0.19 -3.07 7.27 84.65 0.62 -2.45 16 23 Cl 0.00 0.06 29.10 -2.72 -0.08 -0.02 16 24 C -0.15 3.17 9.32 22.50 0.21 3.38 16 25 N -0.07 0.53 9.55 37.02 0.35 0.88 16 26 N -0.26 2.60 12.33 -49.03 -0.60 2.00 16 27 C -0.11 4.25 5.19 30.61 0.16 4.41 16 28 C -0.13 6.49 4.96 30.61 0.15 6.64 16 29 H 0.13 -8.88 8.14 -2.39 -0.02 -8.90 16 30 H 0.14 -10.01 8.14 -2.39 -0.02 -10.03 16 31 H 0.07 -2.88 8.14 -2.39 -0.02 -2.90 16 32 H 0.09 -4.18 8.14 -2.39 -0.02 -4.20 16 33 H 0.05 -1.56 8.14 -2.39 -0.02 -1.58 16 34 H 0.09 -3.61 7.24 -2.39 -0.02 -3.63 16 35 H 0.24 -8.32 6.54 -2.91 -0.02 -8.34 16 36 H 0.11 -0.88 6.15 -2.38 -0.01 -0.89 16 37 H 0.39 -7.87 8.70 -74.06 -0.64 -8.51 16 38 H -0.30 1.68 7.11 99.48 0.71 2.39 16 39 H -0.28 2.86 7.11 99.48 0.71 3.57 16 40 H 0.20 -4.32 5.14 -2.91 -0.01 -4.34 16 41 H 0.19 -5.54 6.98 -2.92 -0.02 -5.56 16 42 H 0.08 -3.13 8.14 -2.39 -0.02 -3.15 16 43 H 0.04 -1.20 8.14 -2.39 -0.02 -1.22 16 44 H 0.10 -6.02 6.75 -2.39 -0.02 -6.04 16 45 H 0.07 -3.50 8.14 -2.39 -0.02 -3.52 16 Total: 1.00 -102.41 367.32 -1.22 -103.63 By element: Atomic # 1 Polarization: -184.68 SS G_CDS: -1.79 Total: -186.47 kcal Atomic # 6 Polarization: 23.43 SS G_CDS: 4.11 Total: 27.54 kcal Atomic # 7 Polarization: 63.88 SS G_CDS: -3.74 Total: 60.14 kcal Atomic # 8 Polarization: 6.18 SS G_CDS: -1.77 Total: 4.41 kcal Atomic # 14 Polarization: -11.28 SS G_CDS: 2.06 Total: -9.23 kcal Atomic # 17 Polarization: 0.06 SS G_CDS: -0.08 Total: -0.02 kcal Total: -102.41 -1.22 -103.63 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_16521754_17850172.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 283.941 kcal (2) G-P(sol) polarization free energy of solvation -102.412 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 181.529 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -103.631 kcal (6) G-S(sol) free energy of system = (1) + (5) 180.310 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds