Wall clock time and date at job start Mon Mar 8 2021 07:19:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 H 1.00899 * 1 3 3 H 1.00901 * 109.46980 * 1 2 4 4 H 1.00900 * 109.47588 * 239.99688 * 1 2 3 5 5 C 1.46900 * 109.46744 * 119.99382 * 1 2 3 6 6 H 1.08993 * 109.47379 * 300.00275 * 5 1 2 7 7 C 1.53002 * 109.47059 * 60.00575 * 5 1 2 8 8 C 1.53000 * 109.47213 * 59.99608 * 7 5 1 9 9 C 1.53002 * 109.46965 * 60.00245 * 8 7 5 10 10 H 1.09000 * 109.47282 * 59.99712 * 9 8 7 11 11 C 1.50696 * 109.47193 * 179.97438 * 9 8 7 12 12 C 1.35354 * 126.75513 * 84.99641 * 11 9 8 13 13 N 1.35307 * 106.17781 * 180.02562 * 12 11 9 14 14 C 1.46499 * 125.86634 * 179.97438 * 13 12 11 15 15 C 1.53002 * 109.46804 * 125.00128 * 14 13 12 16 16 C 1.52997 * 113.00235 * 309.66823 * 15 14 13 17 17 O 1.42896 * 109.46906 * 297.84224 * 16 15 14 18 18 Si 1.86304 * 109.47059 * 177.84117 * 16 15 14 19 19 C 1.54036 * 113.92484 * 81.60274 * 15 14 13 20 20 O 1.44175 * 85.52116 * 91.65595 * 19 15 14 21 21 C 1.44183 * 93.33973 * 24.19538 * 20 19 15 22 22 N 1.28714 * 108.26692 * 0.26556 * 13 12 11 23 23 N 1.28643 * 110.17489 * 359.56080 * 22 13 12 24 24 C 1.53002 * 109.46955 * 299.99913 * 9 8 7 25 25 C 1.53000 * 109.47213 * 60.00239 * 24 9 8 26 26 H 1.09001 * 109.46877 * 299.99723 * 7 5 1 27 27 H 1.09000 * 109.46962 * 179.97438 * 7 5 1 28 28 H 1.09000 * 109.47356 * 300.00003 * 8 7 5 29 29 H 1.09002 * 109.46814 * 180.02562 * 8 7 5 30 30 H 1.08006 * 126.90508 * 0.02562 * 12 11 9 31 31 H 1.09002 * 109.47362 * 5.00317 * 14 13 12 32 32 H 1.08998 * 109.47537 * 245.00022 * 14 13 12 33 33 H 1.09002 * 109.47153 * 57.83942 * 16 15 14 34 34 H 0.96708 * 114.00101 * 299.99268 * 17 16 15 35 35 H 1.48497 * 110.00028 * 58.68131 * 18 16 15 36 36 H 1.48501 * 109.99652 * 179.97438 * 18 16 15 37 37 H 1.09003 * 113.86411 * 205.80796 * 19 15 14 38 38 H 1.09000 * 113.86481 * 337.50906 * 19 15 14 39 39 H 1.08993 * 113.86414 * 221.66236 * 21 20 19 40 40 H 1.09002 * 113.86477 * 89.95111 * 21 20 19 41 41 H 1.09001 * 109.46877 * 180.02562 * 24 9 8 42 42 H 1.09000 * 109.46962 * 299.99995 * 24 9 8 43 43 H 1.09002 * 109.46814 * 179.97438 * 25 24 9 44 44 H 1.09000 * 109.47356 * 59.99997 * 25 24 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 1 1.0090 0.0000 0.0000 3 1 -0.3363 0.9513 0.0000 4 1 -0.3364 -0.4757 0.8238 5 6 -0.4896 -0.6924 -1.1995 6 1 -0.1262 -0.1785 -2.0894 7 6 0.0204 -2.1349 -1.1996 8 6 -0.4897 -2.8562 0.0496 9 6 -2.0197 -2.8562 0.0495 10 1 -2.3830 -3.3699 -0.8406 11 6 -2.5222 -3.5672 1.2795 12 6 -2.7031 -3.0298 2.5085 13 7 -3.1640 -4.0308 3.2936 14 6 -3.5038 -3.9203 4.7143 15 6 -4.9411 -4.3969 4.9335 16 6 -5.9398 -3.7447 3.9754 17 8 -5.9564 -2.3326 4.1934 18 14 -7.6404 -4.4406 4.2828 19 6 -5.0833 -5.9274 5.0332 20 8 -4.9220 -5.7366 6.4531 21 6 -5.3866 -4.3724 6.4079 22 7 -3.2468 -5.0983 2.5792 23 7 -2.8765 -4.8538 1.3717 24 6 -2.5297 -1.4137 0.0495 25 6 -2.0196 -0.6924 -1.1997 26 1 1.1104 -2.1349 -1.1995 27 1 -0.3433 -2.6488 -2.0894 28 1 -0.1264 -2.3425 0.9397 29 1 -0.1260 -3.8838 0.0497 30 1 -2.5169 -2.0075 2.8032 31 1 -3.4136 -2.8808 5.0298 32 1 -2.8229 -4.5381 5.2999 33 1 -5.6437 -3.9501 2.9467 34 1 -6.2120 -2.0759 5.0901 35 1 -8.0427 -4.1951 5.6910 36 1 -8.6200 -3.8146 3.3587 37 1 -6.0676 -6.2984 4.7471 38 1 -4.2663 -6.4776 4.5666 39 1 -4.8099 -3.6893 7.0314 40 1 -6.4634 -4.2686 6.5415 41 1 -3.6197 -1.4137 0.0499 42 1 -2.1664 -0.8999 0.9396 43 1 -2.3833 0.3352 -1.1998 44 1 -2.3829 -1.2061 -2.0897 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_273910_16762298_17761092.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:19:40 Heat of formation + Delta-G solvation = 141.986627 kcal Electronic energy + Delta-G solvation = -25654.997394 eV Core-core repulsion = 22116.179395 eV Total energy + Delta-G solvation = -3538.817998 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.176 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -44.36174 -42.11137 -41.45569 -38.02785 -36.87292 -35.56050 -32.64098 -32.31207 -31.99722 -29.75003 -28.29920 -27.75054 -26.08033 -24.79069 -23.98343 -23.06849 -22.13777 -20.64233 -20.38558 -19.01469 -18.95942 -18.56218 -18.14249 -17.78982 -17.30232 -16.83826 -16.75870 -16.61316 -16.24926 -15.80197 -15.62848 -15.13891 -15.03791 -14.83551 -14.36058 -14.01576 -13.87569 -13.74201 -13.56348 -13.36898 -13.35946 -13.32680 -12.66979 -12.41940 -12.22882 -12.21092 -11.91815 -11.59983 -11.52465 -11.50189 -11.37198 -11.14290 -10.71437 -10.68547 -10.09410 -5.09469 0.65409 1.06149 1.32145 1.34969 1.55104 1.67011 1.73721 2.47971 2.66078 3.11713 3.17823 3.21369 3.31091 3.38030 3.42164 3.59604 3.69148 3.78987 3.94692 3.95210 4.01079 4.10611 4.14229 4.17229 4.23287 4.27861 4.29432 4.32175 4.36073 4.42103 4.50968 4.61640 4.67423 4.71432 4.80564 4.84388 4.90264 4.93217 4.97192 5.02984 5.16952 5.23377 5.30773 5.37763 5.39321 5.62587 6.32920 7.55893 Molecular weight = 296.18amu Principal moments of inertia in cm(-1) A = 0.025177 B = 0.004366 C = 0.004166 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1111.841316 B = 6412.159444 C = 6719.342348 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.625 5.625 2 H 0.451 0.549 3 H 0.452 0.548 4 H 0.432 0.568 5 C 0.061 3.939 6 H 0.167 0.833 7 C -0.142 4.142 8 C -0.122 4.122 9 C -0.005 4.005 10 H 0.066 0.934 11 C -0.035 4.035 12 C -0.027 4.027 13 N -0.281 5.281 14 C 0.145 3.855 15 C -0.160 4.160 16 C -0.076 4.076 17 O -0.533 6.533 18 Si 0.694 3.306 19 C 0.044 3.956 20 O -0.392 6.392 21 C 0.035 3.965 22 N -0.122 5.122 23 N -0.315 5.315 24 C -0.123 4.123 25 C -0.142 4.142 26 H 0.110 0.890 27 H 0.084 0.916 28 H 0.100 0.900 29 H 0.048 0.952 30 H 0.236 0.764 31 H 0.153 0.847 32 H 0.111 0.889 33 H 0.097 0.903 34 H 0.391 0.609 35 H -0.259 1.259 36 H -0.306 1.306 37 H 0.101 0.899 38 H 0.105 0.895 39 H 0.129 0.871 40 H 0.091 0.909 41 H 0.059 0.941 42 H 0.106 0.894 43 H 0.115 0.885 44 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 18.293 21.348 -9.626 29.715 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.031 5.031 2 H 0.283 0.717 3 H 0.284 0.716 4 H 0.263 0.737 5 C -0.044 4.044 6 H 0.184 0.816 7 C -0.180 4.180 8 C -0.160 4.160 9 C -0.026 4.026 10 H 0.085 0.915 11 C -0.175 4.175 12 C -0.179 4.179 13 N -0.073 5.073 14 C 0.025 3.975 15 C -0.161 4.161 16 C -0.189 4.189 17 O -0.341 6.341 18 Si 0.601 3.399 19 C -0.032 4.032 20 O -0.311 6.311 21 C -0.042 4.042 22 N -0.100 5.100 23 N -0.180 5.180 24 C -0.161 4.161 25 C -0.180 4.180 26 H 0.128 0.872 27 H 0.102 0.898 28 H 0.119 0.881 29 H 0.067 0.933 30 H 0.252 0.748 31 H 0.171 0.829 32 H 0.129 0.871 33 H 0.115 0.885 34 H 0.241 0.759 35 H -0.184 1.184 36 H -0.234 1.234 37 H 0.119 0.881 38 H 0.124 0.876 39 H 0.147 0.853 40 H 0.109 0.891 41 H 0.078 0.922 42 H 0.124 0.876 43 H 0.133 0.867 44 H 0.102 0.898 Dipole moment (debyes) X Y Z Total from point charges 17.252 19.676 -9.980 28.007 hybrid contribution -0.370 1.157 0.784 1.446 sum 16.882 20.833 -9.195 28.347 Atomic orbital electron populations 1.42551 1.22244 1.21031 1.17228 0.71709 0.71582 0.73741 1.22832 0.96413 0.95293 0.89853 0.81560 1.22065 1.03447 0.93188 0.99269 1.21732 0.92410 1.02328 0.99510 1.19635 0.96124 0.95473 0.91368 0.91550 1.22523 1.06480 0.91047 0.97458 1.24017 1.05381 0.97984 0.90518 1.47473 1.40817 1.07294 1.11727 1.22006 0.93760 1.07006 0.74735 1.24430 0.96618 0.97642 0.97433 1.25718 1.06254 0.84936 1.01974 1.86524 1.90439 1.19490 1.37694 0.94209 0.75206 0.91811 0.78715 1.24191 1.03350 0.94333 0.81377 1.89792 1.85268 1.30217 1.25844 1.24453 1.01576 0.85112 0.93067 1.78366 1.21579 1.11618 0.98446 1.75113 1.15261 1.17388 1.10209 1.21785 1.02191 0.92433 0.99726 1.22073 0.92457 1.04073 0.99416 0.87169 0.89778 0.88122 0.93326 0.74798 0.82911 0.87084 0.88473 0.75886 1.18383 1.23408 0.88126 0.87647 0.85300 0.89142 0.92221 0.87552 0.86717 0.89793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.63 47.44 4.05 -168.68 -0.68 46.76 16 2 H 0.45 -36.11 8.96 -89.69 -0.80 -36.92 16 3 H 0.45 -36.51 8.96 -89.69 -0.80 -37.32 16 4 H 0.43 -32.68 5.25 -89.69 -0.47 -33.15 16 5 C 0.06 -3.94 3.50 44.92 0.16 -3.79 16 6 H 0.17 -11.16 8.14 -2.39 -0.02 -11.18 16 7 C -0.14 7.66 5.59 30.59 0.17 7.83 16 8 C -0.12 5.67 4.92 30.59 0.15 5.82 16 9 C -0.01 0.21 2.65 -11.54 -0.03 0.18 16 10 H 0.07 -2.13 8.14 -2.39 -0.02 -2.15 16 11 C -0.04 1.02 6.16 41.60 0.26 1.28 16 12 C -0.03 0.91 10.75 83.49 0.90 1.81 16 13 N -0.28 7.25 2.57 -347.73 -0.89 6.36 16 14 C 0.15 -4.24 5.70 86.38 0.49 -3.75 16 15 C -0.16 3.95 0.70 -51.48 -0.04 3.92 16 16 C -0.08 1.72 2.23 71.98 0.16 1.88 16 17 O -0.53 13.27 12.71 -148.98 -1.89 11.37 16 18 Si 0.69 -12.19 28.42 68.60 1.95 -10.24 16 19 C 0.04 -0.85 7.66 72.27 0.55 -0.29 16 20 O -0.39 6.30 12.38 -148.98 -1.85 4.46 16 21 C 0.03 -0.82 7.61 72.28 0.55 -0.27 16 22 N -0.12 2.03 12.05 37.02 0.45 2.48 16 23 N -0.31 5.13 12.41 -48.60 -0.60 4.52 16 24 C -0.12 6.05 4.54 30.59 0.14 6.19 16 25 C -0.14 7.88 5.59 30.59 0.17 8.05 16 26 H 0.11 -6.23 8.14 -2.39 -0.02 -6.25 16 27 H 0.08 -3.94 8.14 -2.39 -0.02 -3.95 16 28 H 0.10 -5.57 6.65 -2.39 -0.02 -5.59 16 29 H 0.05 -1.73 8.14 -2.39 -0.02 -1.75 16 30 H 0.24 -10.77 7.49 -2.91 -0.02 -10.79 16 31 H 0.15 -5.65 8.07 -2.39 -0.02 -5.67 16 32 H 0.11 -3.12 8.06 -2.39 -0.02 -3.14 16 33 H 0.10 -1.86 7.22 -2.39 -0.02 -1.87 16 34 H 0.39 -12.02 8.36 -74.05 -0.62 -12.64 16 35 H -0.26 3.98 6.03 99.48 0.60 4.58 16 36 H -0.31 2.43 7.11 99.48 0.71 3.14 16 37 H 0.10 -2.12 5.41 -2.39 -0.01 -2.13 16 38 H 0.11 -1.88 7.61 -2.39 -0.02 -1.90 16 39 H 0.13 -3.79 8.10 -2.39 -0.02 -3.81 16 40 H 0.09 -2.05 5.09 -2.39 -0.01 -2.06 16 41 H 0.06 -2.40 8.14 -2.39 -0.02 -2.42 16 42 H 0.11 -6.27 5.89 -2.39 -0.01 -6.28 16 43 H 0.11 -6.71 8.14 -2.39 -0.02 -6.73 16 44 H 0.08 -4.03 8.14 -2.39 -0.02 -4.05 16 Total: 1.00 -97.83 331.54 -1.61 -99.44 By element: Atomic # 1 Polarization: -192.30 SS G_CDS: -1.72 Total: -194.02 kcal Atomic # 6 Polarization: 25.23 SS G_CDS: 3.63 Total: 28.86 kcal Atomic # 7 Polarization: 61.85 SS G_CDS: -1.73 Total: 60.12 kcal Atomic # 8 Polarization: 19.57 SS G_CDS: -3.74 Total: 15.83 kcal Atomic # 14 Polarization: -12.19 SS G_CDS: 1.95 Total: -10.24 kcal Total: -97.83 -1.61 -99.44 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_273910_16762298_17761092.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 241.427 kcal (2) G-P(sol) polarization free energy of solvation -97.833 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 143.594 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -99.441 kcal (6) G-S(sol) free energy of system = (1) + (5) 141.987 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds