Wall clock time and date at job start Mon Mar 8 2021 07:14:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47341 * 2 1 4 4 C 1.50701 * 109.46882 * 240.00227 * 2 1 3 5 5 C 1.38599 * 120.72367 * 119.72386 * 4 2 1 6 6 N 1.32273 * 119.19828 * 179.72188 * 5 4 2 7 7 C 1.32495 * 120.74074 * 0.56279 * 6 5 4 8 8 N 1.38406 * 119.21874 * 179.73504 * 7 6 5 9 9 C 1.46505 * 120.00091 * 359.97239 * 8 7 6 10 10 H 1.09001 * 109.46960 * 325.01036 * 9 8 7 11 11 C 1.53002 * 109.46729 * 85.00286 * 9 8 7 12 12 C 1.52991 * 109.47096 * 60.00224 * 11 9 8 13 13 C 1.53000 * 109.47549 * 59.99888 * 12 11 9 14 14 H 1.09003 * 109.46690 * 59.99372 * 13 12 11 15 15 C 1.52991 * 109.47549 * 179.97438 * 13 12 11 16 16 O 1.42899 * 109.47349 * 294.99711 * 15 13 12 17 17 C 1.53002 * 109.47013 * 300.00163 * 13 12 11 18 18 C 1.52995 * 109.47373 * 205.00447 * 9 8 7 19 19 N 1.32492 * 121.56467 * 359.70820 * 7 6 5 20 20 C 1.32278 * 120.73878 * 0.02562 * 19 7 6 21 21 H 0.96702 * 113.99767 * 300.00194 * 1 2 3 22 22 H 1.09004 * 109.46985 * 120.00760 * 2 1 3 23 23 H 1.48501 * 109.99832 * 178.68108 * 3 2 1 24 24 H 1.48498 * 109.99998 * 300.00426 * 3 2 1 25 25 H 1.08000 * 120.39834 * 359.97438 * 5 4 2 26 26 H 0.96993 * 120.00479 * 179.97438 * 8 7 6 27 27 H 1.09006 * 109.47182 * 180.02562 * 11 9 8 28 28 H 1.09000 * 109.47453 * 300.00010 * 11 9 8 29 29 H 1.09003 * 109.47637 * 299.99840 * 12 11 9 30 30 H 1.09004 * 109.47347 * 179.97438 * 12 11 9 31 31 H 1.08995 * 109.47361 * 55.00340 * 15 13 12 32 32 H 1.09004 * 109.47354 * 175.00213 * 15 13 12 33 33 H 0.96705 * 114.00240 * 179.97438 * 16 15 13 34 34 H 1.09000 * 109.47140 * 299.99826 * 17 13 12 35 35 H 1.08996 * 109.47371 * 179.97438 * 17 13 12 36 36 H 1.08994 * 109.47231 * 60.00249 * 18 9 8 37 37 H 1.09000 * 109.47202 * 180.02562 * 18 9 8 38 38 H 1.07998 * 120.39952 * 180.02562 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7243 -0.0496 -2.1555 6 7 3.1531 -0.7039 -3.2221 7 6 2.8235 -1.9724 -3.4164 8 7 3.2852 -2.6250 -4.5462 9 6 4.1275 -1.9130 -5.5106 10 1 3.8103 -0.8719 -5.5709 11 6 5.5873 -1.9759 -5.0568 12 6 6.0324 -3.4372 -4.9720 13 6 5.8976 -4.0922 -6.3481 14 1 6.5242 -3.5624 -7.0656 15 6 6.3434 -5.5533 -6.2635 16 8 7.7372 -5.6089 -5.9534 17 6 4.4378 -4.0293 -6.8020 18 6 3.9925 -2.5679 -6.8868 19 7 2.0628 -2.6311 -2.5545 20 6 1.6051 -2.0369 -1.4650 21 1 -0.3933 0.4417 0.7651 22 1 1.7923 -0.5140 0.8899 23 1 3.5347 1.7702 0.0321 24 1 1.5615 2.4679 -1.2084 25 1 2.9922 0.9857 -2.0051 26 1 3.0512 -3.5537 -4.6996 27 1 6.2140 -1.4458 -5.7740 28 1 5.6834 -1.5094 -4.0764 29 1 5.4058 -3.9670 -4.2545 30 1 7.0726 -3.4820 -4.6491 31 1 5.7770 -6.0613 -5.4831 32 1 6.1642 -6.0438 -7.2203 33 1 8.0891 -6.5069 -5.8837 34 1 3.8111 -4.5590 -6.0845 35 1 4.3417 -4.4955 -7.7825 36 1 2.9526 -2.5231 -7.2101 37 1 4.6196 -2.0385 -7.6041 38 1 0.9858 -2.5793 -0.7659 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_7044652_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:14:35 Heat of formation + Delta-G solvation = -28.897819 kcal Electronic energy + Delta-G solvation = -20592.868330 eV Core-core repulsion = 17436.797114 eV Total energy + Delta-G solvation = -3156.071216 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -42.08331 -40.41014 -38.08558 -37.60558 -35.58141 -34.66135 -32.90034 -31.84995 -30.95932 -26.85954 -26.24109 -25.57866 -23.70718 -23.13612 -22.14895 -20.55291 -19.53118 -18.55837 -18.31900 -18.02660 -16.91827 -16.46996 -16.39183 -16.06888 -15.71697 -15.44979 -15.32486 -15.09823 -14.78377 -14.58289 -14.03312 -13.90402 -13.60513 -13.22719 -13.12722 -12.98898 -12.54305 -12.23839 -12.22096 -11.87212 -11.77965 -11.62529 -11.53575 -11.16128 -11.02661 -10.85120 -10.53385 -9.92619 -9.01780 -5.05214 0.10472 0.21580 1.22747 1.58677 1.87045 1.90637 2.84770 3.11874 3.18003 3.37374 3.59544 3.61873 3.68535 3.78339 3.87805 3.90992 4.00180 4.16240 4.20147 4.33467 4.40950 4.41869 4.47541 4.48768 4.58165 4.63506 4.70409 4.81752 4.93568 4.98204 5.04451 5.08143 5.23962 5.33093 5.39341 5.43336 5.84554 6.06853 6.46000 6.59473 6.65650 7.35003 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.049 4.049 3 Si 0.680 3.320 4 C -0.251 4.251 5 C 0.194 3.806 6 N -0.560 5.560 7 C 0.568 3.432 8 N -0.686 5.686 9 C 0.159 3.841 10 H 0.092 0.908 11 C -0.130 4.130 12 C -0.108 4.108 13 C -0.088 4.088 14 H 0.080 0.920 15 C 0.079 3.921 16 O -0.573 6.573 17 C -0.115 4.115 18 C -0.126 4.126 19 N -0.569 5.569 20 C 0.227 3.773 21 H 0.384 0.616 22 H 0.076 0.924 23 H -0.253 1.253 24 H -0.249 1.249 25 H 0.156 0.844 26 H 0.412 0.588 27 H 0.073 0.927 28 H 0.067 0.933 29 H 0.059 0.941 30 H 0.069 0.931 31 H 0.044 0.956 32 H 0.046 0.954 33 H 0.380 0.620 34 H 0.062 0.938 35 H 0.071 0.929 36 H 0.073 0.927 37 H 0.084 0.916 38 H 0.172 0.828 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.855 0.090 2.255 2.413 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.354 6.354 2 C -0.162 4.162 3 Si 0.581 3.419 4 C -0.259 4.259 5 C 0.026 3.974 6 N -0.282 5.282 7 C 0.212 3.788 8 N -0.323 5.323 9 C 0.054 3.946 10 H 0.110 0.890 11 C -0.169 4.169 12 C -0.146 4.146 13 C -0.106 4.106 14 H 0.098 0.902 15 C 0.001 3.999 16 O -0.378 6.378 17 C -0.153 4.153 18 C -0.164 4.164 19 N -0.291 5.291 20 C 0.059 3.941 21 H 0.231 0.769 22 H 0.093 0.907 23 H -0.177 1.177 24 H -0.173 1.173 25 H 0.173 0.827 26 H 0.251 0.749 27 H 0.092 0.908 28 H 0.086 0.914 29 H 0.077 0.923 30 H 0.088 0.912 31 H 0.063 0.937 32 H 0.064 0.936 33 H 0.227 0.773 34 H 0.081 0.919 35 H 0.089 0.911 36 H 0.091 0.909 37 H 0.102 0.898 38 H 0.189 0.811 Dipole moment (debyes) X Y Z Total from point charges 0.124 0.632 0.246 0.689 hybrid contribution -0.330 -1.121 0.596 1.312 sum -0.206 -0.489 0.842 0.996 Atomic orbital electron populations 1.86485 1.17321 1.81818 1.49821 1.24293 0.85558 1.09896 0.96416 0.95118 0.80861 0.78151 0.87785 1.20709 1.07074 0.97669 1.00452 1.22571 0.89478 0.98342 0.87020 1.67910 1.28383 1.08650 1.23279 1.19398 0.86738 0.85527 0.87147 1.44352 1.53636 1.14554 1.19803 1.20991 0.89812 0.96933 0.86820 0.88958 1.21954 0.95446 0.97135 1.02385 1.21476 1.01869 0.95170 0.96080 1.21172 0.96094 0.94852 0.98507 0.90174 1.22230 0.82035 0.96878 0.98773 1.86475 1.24048 1.33219 1.94094 1.21522 0.95268 0.96755 1.01761 1.21829 1.02520 0.96036 0.96050 1.68001 1.16180 1.39305 1.05603 1.22802 0.89886 0.90523 0.90904 0.76864 0.90655 1.17744 1.17332 0.82703 0.74877 0.90803 0.91404 0.92271 0.91188 0.93738 0.93624 0.77300 0.91940 0.91060 0.90856 0.89767 0.81140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.31 12.76 -35.23 -0.45 -0.14 16 2 C -0.05 0.04 2.84 36.01 0.10 0.14 16 3 Si 0.68 -1.09 29.87 -169.99 -5.08 -6.17 16 4 C -0.25 -0.60 5.43 -104.35 -0.57 -1.17 16 5 C 0.19 0.67 9.92 -17.23 -0.17 0.50 16 6 N -0.56 -2.55 9.20 -13.93 -0.13 -2.68 16 7 C 0.57 2.39 8.40 -322.81 -2.71 -0.32 16 8 N -0.69 -1.23 4.38 -55.79 -0.24 -1.47 16 9 C 0.16 0.10 2.78 -67.93 -0.19 -0.08 16 10 H 0.09 0.17 7.50 -51.93 -0.39 -0.22 16 11 C -0.13 -0.13 5.62 -26.73 -0.15 -0.28 16 12 C -0.11 -0.12 4.94 -26.74 -0.13 -0.25 16 13 C -0.09 0.01 2.43 -90.62 -0.22 -0.21 16 14 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 15 C 0.08 -0.02 6.43 37.15 0.24 0.22 16 16 O -0.57 -0.64 13.19 -35.23 -0.46 -1.10 16 17 C -0.12 0.17 5.03 -26.73 -0.13 0.03 16 18 C -0.13 0.15 5.61 -26.73 -0.15 0.00 16 19 N -0.57 -2.47 10.46 -13.93 -0.15 -2.62 16 20 C 0.23 0.64 10.92 -17.22 -0.19 0.45 16 21 H 0.38 -2.14 8.74 45.56 0.40 -1.74 16 22 H 0.08 -0.19 7.96 -51.93 -0.41 -0.60 16 23 H -0.25 -0.20 7.11 56.52 0.40 0.20 16 24 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 25 H 0.16 0.33 5.04 -52.49 -0.26 0.06 16 26 H 0.41 0.34 6.98 -40.82 -0.28 0.06 16 27 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 28 H 0.07 0.19 8.14 -51.93 -0.42 -0.23 16 29 H 0.06 0.11 7.60 -51.93 -0.39 -0.29 16 30 H 0.07 0.18 7.82 -51.93 -0.41 -0.23 16 31 H 0.04 -0.03 8.14 -51.93 -0.42 -0.45 16 32 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 33 H 0.38 -1.11 9.12 45.56 0.42 -0.69 16 34 H 0.06 -0.10 6.51 -51.93 -0.34 -0.43 16 35 H 0.07 -0.14 8.14 -51.93 -0.42 -0.57 16 36 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 37 H 0.08 -0.14 8.14 -51.93 -0.42 -0.57 16 38 H 0.17 0.08 8.06 -52.49 -0.42 -0.35 16 LS Contribution 304.90 15.07 4.59 4.59 Total: 0.00 -7.50 304.90 -10.87 -18.37 By element: Atomic # 1 Polarization: -3.12 SS G_CDS: -4.68 Total: -7.80 kcal Atomic # 6 Polarization: 3.30 SS G_CDS: -4.27 Total: -0.98 kcal Atomic # 7 Polarization: -6.25 SS G_CDS: -0.52 Total: -6.77 kcal Atomic # 8 Polarization: -0.33 SS G_CDS: -0.91 Total: -1.25 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: -5.08 Total: -6.17 kcal Total LS contribution 4.59 Total: 4.59 kcal Total: -7.50 -10.87 -18.37 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_7044652_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -10.533 kcal (2) G-P(sol) polarization free energy of solvation -7.497 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.030 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.868 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.365 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.898 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds