Wall clock time and date at job start Mon Mar 8 2021 07:14:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86300 * 109.47341 * 2 1 4 4 C 1.50701 * 109.46882 * 240.00227 * 2 1 3 5 5 C 1.38599 * 120.72367 * 119.72386 * 4 2 1 6 6 N 1.32273 * 119.19828 * 179.72188 * 5 4 2 7 7 C 1.32495 * 120.74074 * 0.56279 * 6 5 4 8 8 N 1.38406 * 119.21874 * 179.73504 * 7 6 5 9 9 C 1.46505 * 120.00091 * 359.97239 * 8 7 6 10 10 H 1.09001 * 109.46960 * 325.01036 * 9 8 7 11 11 C 1.53002 * 109.46729 * 85.00286 * 9 8 7 12 12 C 1.52991 * 109.47096 * 60.00224 * 11 9 8 13 13 C 1.53000 * 109.47549 * 59.99888 * 12 11 9 14 14 H 1.09003 * 109.46690 * 59.99372 * 13 12 11 15 15 C 1.52991 * 109.47549 * 179.97438 * 13 12 11 16 16 O 1.42899 * 109.47349 * 294.99711 * 15 13 12 17 17 C 1.53002 * 109.47013 * 300.00163 * 13 12 11 18 18 C 1.52995 * 109.47373 * 205.00447 * 9 8 7 19 19 N 1.32492 * 121.56467 * 359.70820 * 7 6 5 20 20 C 1.32278 * 120.73878 * 0.02562 * 19 7 6 21 21 H 0.96702 * 113.99767 * 300.00194 * 1 2 3 22 22 H 1.09004 * 109.46985 * 120.00760 * 2 1 3 23 23 H 1.48501 * 109.99832 * 178.68108 * 3 2 1 24 24 H 1.48498 * 109.99998 * 300.00426 * 3 2 1 25 25 H 1.08000 * 120.39834 * 359.97438 * 5 4 2 26 26 H 0.96993 * 120.00479 * 179.97438 * 8 7 6 27 27 H 1.09006 * 109.47182 * 180.02562 * 11 9 8 28 28 H 1.09000 * 109.47453 * 300.00010 * 11 9 8 29 29 H 1.09003 * 109.47637 * 299.99840 * 12 11 9 30 30 H 1.09004 * 109.47347 * 179.97438 * 12 11 9 31 31 H 1.08995 * 109.47361 * 55.00340 * 15 13 12 32 32 H 1.09004 * 109.47354 * 175.00213 * 15 13 12 33 33 H 0.96705 * 114.00240 * 179.97438 * 16 15 13 34 34 H 1.09000 * 109.47140 * 299.99826 * 17 13 12 35 35 H 1.08996 * 109.47371 * 179.97438 * 17 13 12 36 36 H 1.08994 * 109.47231 * 60.00249 * 18 9 8 37 37 H 1.09000 * 109.47202 * 180.02562 * 18 9 8 38 38 H 1.07998 * 120.39952 * 180.02562 * 20 19 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7243 -0.0496 -2.1555 6 7 3.1531 -0.7039 -3.2221 7 6 2.8235 -1.9724 -3.4164 8 7 3.2852 -2.6250 -4.5462 9 6 4.1275 -1.9130 -5.5106 10 1 3.8103 -0.8719 -5.5709 11 6 5.5873 -1.9759 -5.0568 12 6 6.0324 -3.4372 -4.9720 13 6 5.8976 -4.0922 -6.3481 14 1 6.5242 -3.5624 -7.0656 15 6 6.3434 -5.5533 -6.2635 16 8 7.7372 -5.6089 -5.9534 17 6 4.4378 -4.0293 -6.8020 18 6 3.9925 -2.5679 -6.8868 19 7 2.0628 -2.6311 -2.5545 20 6 1.6051 -2.0369 -1.4650 21 1 -0.3933 0.4417 0.7651 22 1 1.7923 -0.5140 0.8899 23 1 3.5347 1.7702 0.0321 24 1 1.5615 2.4679 -1.2084 25 1 2.9922 0.9857 -2.0051 26 1 3.0512 -3.5537 -4.6996 27 1 6.2140 -1.4458 -5.7740 28 1 5.6834 -1.5094 -4.0764 29 1 5.4058 -3.9670 -4.2545 30 1 7.0726 -3.4820 -4.6491 31 1 5.7770 -6.0613 -5.4831 32 1 6.1642 -6.0438 -7.2203 33 1 8.0891 -6.5069 -5.8837 34 1 3.8111 -4.5590 -6.0845 35 1 4.3417 -4.4955 -7.7825 36 1 2.9526 -2.5231 -7.2101 37 1 4.6196 -2.0385 -7.6041 38 1 0.9858 -2.5793 -0.7659 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_7044652_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:14:34 Heat of formation + Delta-G solvation = -28.842349 kcal Electronic energy + Delta-G solvation = -20592.865924 eV Core-core repulsion = 17436.797114 eV Total energy + Delta-G solvation = -3156.068810 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.27710 -40.46315 -38.07332 -37.59031 -35.66411 -34.89402 -32.99158 -31.88667 -31.03094 -26.90847 -26.34564 -25.72250 -23.73880 -23.24711 -22.18484 -20.61630 -19.70919 -18.61777 -18.28464 -18.08333 -16.98932 -16.58889 -16.43810 -16.16816 -15.83293 -15.49475 -15.36372 -15.16202 -14.84919 -14.62801 -14.09392 -13.95754 -13.64972 -13.26477 -13.16849 -13.02305 -12.55471 -12.34042 -12.25520 -12.03279 -11.95557 -11.70343 -11.56532 -11.18137 -11.10360 -10.85422 -10.57452 -10.05039 -9.17558 -4.96304 -0.11796 0.00847 1.30932 1.65066 1.73178 1.96353 2.64673 2.94701 3.24481 3.40060 3.46211 3.56105 3.66005 3.68354 3.85098 3.87857 3.99100 4.11703 4.21477 4.34558 4.36779 4.42431 4.44804 4.53461 4.58722 4.62688 4.66567 4.74922 4.92896 4.95616 5.03665 5.07658 5.12249 5.23069 5.32766 5.39252 5.65866 5.91237 6.30108 6.83946 6.95969 7.14219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.052 4.052 3 Si 0.771 3.229 4 C -0.255 4.255 5 C 0.174 3.826 6 N -0.578 5.578 7 C 0.552 3.448 8 N -0.680 5.680 9 C 0.162 3.838 10 H 0.079 0.921 11 C -0.125 4.125 12 C -0.100 4.100 13 C -0.085 4.085 14 H 0.074 0.926 15 C 0.076 3.924 16 O -0.596 6.596 17 C -0.110 4.110 18 C -0.120 4.120 19 N -0.585 5.585 20 C 0.219 3.781 21 H 0.406 0.594 22 H 0.102 0.898 23 H -0.287 1.287 24 H -0.297 1.297 25 H 0.160 0.840 26 H 0.417 0.583 27 H 0.080 0.920 28 H 0.045 0.955 29 H 0.050 0.950 30 H 0.052 0.948 31 H 0.048 0.952 32 H 0.059 0.941 33 H 0.395 0.605 34 H 0.065 0.935 35 H 0.085 0.915 36 H 0.078 0.922 37 H 0.093 0.907 38 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.551 -0.452 2.514 2.988 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.164 4.164 3 Si 0.677 3.323 4 C -0.263 4.263 5 C 0.007 3.993 6 N -0.301 5.301 7 C 0.195 3.805 8 N -0.317 5.317 9 C 0.058 3.942 10 H 0.097 0.903 11 C -0.164 4.164 12 C -0.138 4.138 13 C -0.104 4.104 14 H 0.093 0.907 15 C -0.001 4.001 16 O -0.404 6.404 17 C -0.147 4.147 18 C -0.158 4.158 19 N -0.307 5.307 20 C 0.051 3.949 21 H 0.258 0.742 22 H 0.120 0.880 23 H -0.215 1.215 24 H -0.225 1.225 25 H 0.176 0.824 26 H 0.256 0.744 27 H 0.099 0.901 28 H 0.064 0.936 29 H 0.069 0.931 30 H 0.071 0.929 31 H 0.066 0.934 32 H 0.077 0.923 33 H 0.245 0.755 34 H 0.083 0.917 35 H 0.103 0.897 36 H 0.096 0.904 37 H 0.111 0.889 38 H 0.211 0.789 Dipole moment (debyes) X Y Z Total from point charges -0.586 0.072 0.538 0.798 hybrid contribution -0.097 -0.921 0.523 1.064 sum -0.683 -0.849 1.061 1.521 Atomic orbital electron populations 1.86431 1.17061 1.82407 1.51602 1.24395 0.85896 1.10230 0.95860 0.94206 0.77418 0.75629 0.85053 1.21061 1.06297 0.97755 1.01160 1.22825 0.90217 0.98769 0.87442 1.67891 1.29094 1.09093 1.24054 1.19661 0.87220 0.85709 0.87866 1.44404 1.53353 1.14683 1.19301 1.20988 0.89101 0.96482 0.87673 0.90301 1.21883 0.96052 0.97082 1.01340 1.21369 1.00446 0.95122 0.96876 1.21154 0.96990 0.94959 0.97256 0.90742 1.22302 0.81546 0.96709 0.99583 1.86435 1.24823 1.34931 1.94223 1.21493 0.94169 0.96554 1.02527 1.21801 1.03063 0.96198 0.94719 1.68037 1.16641 1.39752 1.06266 1.23257 0.89849 0.90950 0.90866 0.74250 0.88028 1.21461 1.22489 0.82354 0.74378 0.90147 0.93617 0.93090 0.92948 0.93385 0.92273 0.75543 0.91671 0.89657 0.90363 0.88856 0.78937 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 1.35 12.76 -148.98 -1.90 -0.55 16 2 C -0.05 0.12 2.84 71.24 0.20 0.32 16 3 Si 0.77 -2.39 29.87 68.60 2.05 -0.34 16 4 C -0.25 -1.32 5.43 -19.69 -0.11 -1.42 16 5 C 0.17 1.47 9.92 84.71 0.84 2.31 16 6 N -0.58 -6.36 9.20 -197.99 -1.82 -8.18 16 7 C 0.55 5.44 8.40 261.49 2.20 7.64 16 8 N -0.68 -3.20 4.38 -330.43 -1.45 -4.64 16 9 C 0.16 0.38 2.78 44.99 0.12 0.51 16 10 H 0.08 0.42 7.50 -2.39 -0.02 0.40 16 11 C -0.12 -0.45 5.62 30.59 0.17 -0.28 16 12 C -0.10 -0.34 4.94 30.59 0.15 -0.19 16 13 C -0.09 0.01 2.43 -10.80 -0.03 -0.01 16 14 H 0.07 0.10 8.14 -2.39 -0.02 0.08 16 15 C 0.08 -0.05 6.43 71.98 0.46 0.41 16 16 O -0.60 -1.45 13.19 -148.98 -1.97 -3.41 16 17 C -0.11 0.39 5.03 30.60 0.15 0.54 16 18 C -0.12 0.31 5.61 30.59 0.17 0.48 16 19 N -0.58 -5.57 10.46 -197.99 -2.07 -7.64 16 20 C 0.22 1.28 10.92 84.71 0.93 2.21 16 21 H 0.41 -5.27 8.74 -74.06 -0.65 -5.92 16 22 H 0.10 -0.72 7.96 -2.39 -0.02 -0.74 16 23 H -0.29 -0.72 7.11 99.48 0.71 -0.01 16 24 H -0.30 -1.44 7.11 99.48 0.71 -0.73 16 25 H 0.16 0.98 5.04 -2.91 -0.01 0.97 16 26 H 0.42 0.97 6.98 -92.71 -0.65 0.32 16 27 H 0.08 0.16 8.14 -2.38 -0.02 0.14 16 28 H 0.04 0.37 8.14 -2.39 -0.02 0.35 16 29 H 0.05 0.25 7.60 -2.39 -0.02 0.24 16 30 H 0.05 0.36 7.82 -2.39 -0.02 0.34 16 31 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 32 H 0.06 -0.20 8.14 -2.38 -0.02 -0.22 16 33 H 0.40 -2.28 9.12 -74.05 -0.68 -2.96 16 34 H 0.06 -0.24 6.51 -2.39 -0.02 -0.26 16 35 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 36 H 0.08 -0.23 8.14 -2.39 -0.02 -0.25 16 37 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 38 H 0.19 0.03 8.06 -2.91 -0.02 0.01 16 Total: 0.00 -18.75 304.90 -2.73 -21.48 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -0.84 Total: -9.22 kcal Atomic # 6 Polarization: 7.24 SS G_CDS: 5.27 Total: 12.51 kcal Atomic # 7 Polarization: -15.12 SS G_CDS: -5.34 Total: -20.46 kcal Atomic # 8 Polarization: -0.10 SS G_CDS: -3.87 Total: -3.97 kcal Atomic # 14 Polarization: -2.39 SS G_CDS: 2.05 Total: -0.34 kcal Total: -18.75 -2.73 -21.48 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_7044652_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.364 kcal (2) G-P(sol) polarization free energy of solvation -18.751 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.115 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.479 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds