Wall clock time and date at job start Mon Mar 8 2021 09:51:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.38403 * 119.99659 * 2 1 4 4 N 1.32492 * 119.22010 * 0.02562 * 3 2 1 5 5 C 1.32274 * 120.73869 * 179.97438 * 4 3 2 6 6 C 1.38606 * 119.19912 * 359.97438 * 5 4 3 7 7 C 1.50701 * 120.72079 * 179.97438 * 6 5 4 8 8 O 1.42896 * 109.47417 * 65.00050 * 7 6 5 9 9 Si 1.86301 * 109.47149 * 185.00066 * 7 6 5 10 10 C 1.38604 * 118.55766 * 0.25142 * 6 5 4 11 11 N 1.32275 * 119.19636 * 359.51533 * 10 6 5 12 12 C 1.46498 * 119.99956 * 180.02562 * 2 1 3 13 13 H 1.09001 * 109.47176 * 179.97438 * 12 2 1 14 14 C 1.53003 * 109.46922 * 299.99875 * 12 2 1 15 15 C 1.53003 * 109.46929 * 180.02562 * 14 12 2 16 16 C 1.52992 * 109.47141 * 299.99647 * 15 14 12 17 17 H 1.08999 * 109.47373 * 299.99996 * 16 15 14 18 18 O 1.42902 * 109.47193 * 180.02562 * 16 15 14 19 19 C 1.52998 * 109.47140 * 60.00088 * 16 15 14 20 20 C 1.52995 * 109.47213 * 299.99818 * 19 16 15 21 21 H 1.08999 * 109.47160 * 89.99527 * 1 2 3 22 22 H 1.09000 * 109.46970 * 209.99831 * 1 2 3 23 23 H 1.08998 * 109.47089 * 329.99250 * 1 2 3 24 24 H 1.08005 * 120.40281 * 179.97438 * 5 4 3 25 25 H 1.09002 * 109.47060 * 305.00076 * 7 6 5 26 26 H 0.96708 * 114.00101 * 59.99427 * 8 7 6 27 27 H 1.48494 * 109.99914 * 58.67711 * 9 7 6 28 28 H 1.48493 * 110.00101 * 179.97438 * 9 7 6 29 29 H 1.08001 * 120.40221 * 179.72136 * 10 6 5 30 30 H 1.09003 * 109.46836 * 300.00004 * 14 12 2 31 31 H 1.08991 * 109.47380 * 59.99747 * 14 12 2 32 32 H 1.09004 * 109.46816 * 179.97438 * 15 14 12 33 33 H 1.08999 * 109.46984 * 59.99881 * 15 14 12 34 34 H 0.96700 * 113.99811 * 60.00480 * 18 16 15 35 35 H 1.09003 * 109.47055 * 180.02562 * 19 16 15 36 36 H 1.09001 * 109.47144 * 60.00263 * 19 16 15 37 37 H 1.09001 * 109.47430 * 300.00270 * 20 19 16 38 38 H 1.09007 * 109.47321 * 179.97438 * 20 19 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1570 1.1986 0.0000 4 7 1.4789 2.3369 0.0005 5 6 2.1096 3.4996 0.0010 6 6 3.4956 3.5170 0.0016 7 6 4.2491 4.8221 0.0016 8 8 3.9937 5.5196 1.2224 9 14 6.0750 4.4850 -0.1507 10 6 4.1734 2.3081 -0.0038 11 7 3.4818 1.1805 0.0005 12 6 2.1975 -1.2687 -0.0006 13 1 3.2692 -1.0696 -0.0009 14 6 1.8279 -2.0715 1.2484 15 6 2.5934 -3.3963 1.2481 16 6 2.2243 -4.1983 -0.0014 17 1 1.1527 -4.3979 -0.0017 18 8 2.9388 -5.4359 -0.0013 19 6 2.5938 -3.3956 -1.2503 20 6 1.8284 -2.0709 -1.2501 21 1 -0.3633 0.0001 -1.0276 22 1 -0.3633 -0.8900 0.5138 23 1 -0.3633 0.8899 0.5139 24 1 1.5514 4.4242 0.0010 25 1 3.9206 5.4314 -0.8405 26 1 4.2615 5.0354 2.0155 27 1 6.3499 3.7321 -1.4007 28 1 6.8292 5.7642 -0.1525 29 1 5.2532 2.2869 -0.0080 30 1 2.0913 -1.5003 2.1386 31 1 0.7563 -2.2706 1.2484 32 1 2.3304 -3.9680 2.1381 33 1 3.6649 -3.1967 1.2484 34 1 2.7525 -5.9975 0.7635 35 1 2.3304 -3.9668 -2.1405 36 1 3.6654 -3.1960 -1.2501 37 1 0.7568 -2.2704 -1.2503 38 1 2.0920 -1.4987 -2.1397 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9156392_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:51:03 Heat of formation + Delta-G solvation = -17.940840 kcal Electronic energy + Delta-G solvation = -20708.756874 eV Core-core repulsion = 17553.160788 eV Total energy + Delta-G solvation = -3155.596085 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 266.142 amu Computer time = 0.40 seconds Orbital eigenvalues (eV) -42.13625 -40.38258 -38.34060 -37.54750 -35.50253 -34.65407 -32.71444 -31.95351 -29.84557 -28.30059 -26.07055 -25.37747 -23.89972 -23.52448 -22.17634 -20.72705 -18.99102 -18.88219 -18.25104 -17.93838 -16.75502 -16.65709 -16.25496 -16.04306 -15.65936 -15.58022 -15.26242 -14.92291 -14.61780 -14.41132 -14.09099 -14.05390 -13.44696 -13.33768 -13.21800 -13.15769 -12.73692 -12.36323 -12.26346 -12.20858 -11.81853 -11.76545 -11.64358 -11.44323 -11.06350 -10.79809 -10.55790 -9.95930 -8.88293 -5.10974 0.08891 0.18607 1.23007 1.56069 1.58971 1.92885 2.83960 3.10276 3.19081 3.40792 3.47274 3.59003 3.63090 3.71507 3.73828 3.95206 4.04473 4.12572 4.17139 4.23473 4.28752 4.34282 4.38201 4.49971 4.56441 4.59645 4.76022 4.77603 4.85020 4.92051 4.94845 5.01486 5.06159 5.19209 5.22614 5.36340 5.80536 5.87489 6.38750 6.51805 6.66136 7.26573 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.097 3.903 2 N -0.579 5.579 3 C 0.568 3.432 4 N -0.567 5.567 5 C 0.223 3.777 6 C -0.297 4.297 7 C -0.045 4.045 8 O -0.541 6.541 9 Si 0.679 3.321 10 C 0.201 3.799 11 N -0.565 5.565 12 C 0.151 3.849 13 H 0.112 0.888 14 C -0.126 4.126 15 C -0.148 4.148 16 C 0.103 3.897 17 H 0.055 0.945 18 O -0.567 6.567 19 C -0.109 4.109 20 C -0.125 4.125 21 H 0.053 0.947 22 H 0.071 0.929 23 H 0.082 0.918 24 H 0.169 0.831 25 H 0.115 0.885 26 H 0.379 0.621 27 H -0.255 1.255 28 H -0.251 1.251 29 H 0.166 0.834 30 H 0.070 0.930 31 H 0.068 0.932 32 H 0.070 0.930 33 H 0.075 0.925 34 H 0.379 0.621 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.068 0.932 38 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.308 -1.680 2.628 3.134 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.293 5.293 3 C 0.213 3.787 4 N -0.289 5.289 5 C 0.055 3.945 6 C -0.306 4.306 7 C -0.157 4.157 8 O -0.346 6.346 9 Si 0.581 3.419 10 C 0.033 3.967 11 N -0.286 5.286 12 C 0.047 3.953 13 H 0.130 0.870 14 C -0.164 4.164 15 C -0.186 4.186 16 C 0.044 3.956 17 H 0.073 0.927 18 O -0.373 6.373 19 C -0.148 4.148 20 C -0.163 4.163 21 H 0.072 0.928 22 H 0.090 0.910 23 H 0.100 0.900 24 H 0.186 0.814 25 H 0.132 0.868 26 H 0.226 0.774 27 H -0.180 1.180 28 H -0.175 1.175 29 H 0.183 0.817 30 H 0.089 0.911 31 H 0.086 0.914 32 H 0.088 0.912 33 H 0.094 0.906 34 H 0.227 0.773 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.087 0.913 38 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges -0.220 -1.939 1.174 2.277 hybrid contribution -0.420 0.738 0.236 0.882 sum -0.640 -1.201 1.410 1.960 Atomic orbital electron populations 1.21666 0.77661 1.03349 1.01944 1.46159 1.05766 1.01333 1.76074 1.19325 0.85242 0.86416 0.87719 1.67999 1.40742 0.97832 1.22300 1.22847 0.90949 0.95186 0.85510 1.21686 0.97167 0.97488 1.14210 1.24684 1.09563 0.91348 0.90144 1.86510 1.87004 1.46018 1.15056 0.95019 0.75688 0.83560 0.87661 1.22749 0.99599 0.86498 0.87829 1.67855 1.06962 1.31373 1.22420 1.21241 0.98413 0.81209 0.94404 0.87048 1.21851 1.00756 0.95742 0.98100 1.22228 1.01744 0.96167 0.98496 1.21841 0.94898 0.83944 0.94872 0.92673 1.86528 1.70294 1.30829 1.49670 1.21417 1.01438 0.94543 0.97352 1.21862 1.00854 0.95475 0.98152 0.92811 0.91047 0.89974 0.81370 0.86772 0.77390 1.18006 1.17517 0.81748 0.91111 0.91373 0.91158 0.90583 0.77349 0.90688 0.90722 0.91331 0.90904 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.10 -0.04 9.50 59.85 0.57 0.53 16 2 N -0.58 -0.67 2.86 -176.27 -0.50 -1.18 16 3 C 0.57 1.65 8.17 -322.81 -2.64 -0.99 16 4 N -0.57 -1.65 9.11 -13.93 -0.13 -1.77 16 5 C 0.22 0.26 10.99 -17.23 -0.19 0.07 16 6 C -0.30 -0.01 5.36 -104.35 -0.56 -0.57 16 7 C -0.04 0.05 2.83 36.01 0.10 0.15 16 8 O -0.54 0.33 12.85 -35.23 -0.45 -0.12 16 9 Si 0.68 -1.18 29.88 -169.99 -5.08 -6.26 16 10 C 0.20 0.08 9.92 -17.23 -0.17 -0.09 16 11 N -0.56 -1.41 8.85 -13.93 -0.12 -1.54 16 12 C 0.15 0.00 2.54 -67.93 -0.17 -0.18 16 13 H 0.11 0.15 6.76 -51.93 -0.35 -0.20 16 14 C -0.13 0.15 5.18 -26.73 -0.14 0.01 16 15 C -0.15 0.23 5.54 -26.73 -0.15 0.08 16 16 C 0.10 -0.08 3.47 -26.74 -0.09 -0.17 16 17 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 18 O -0.57 -0.29 13.32 -35.23 -0.47 -0.76 16 19 C -0.11 0.03 5.57 -26.73 -0.15 -0.12 16 20 C -0.12 0.08 5.21 -26.73 -0.14 -0.06 16 21 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 22 H 0.07 -0.15 6.43 -51.93 -0.33 -0.48 16 23 H 0.08 0.03 7.33 -51.93 -0.38 -0.35 16 24 H 0.17 -0.10 8.06 -52.48 -0.42 -0.52 16 25 H 0.11 -0.10 7.96 -51.93 -0.41 -0.51 16 26 H 0.38 -1.60 8.70 45.56 0.40 -1.20 16 27 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 28 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 29 H 0.17 -0.37 5.07 -52.49 -0.27 -0.63 16 30 H 0.07 -0.02 8.14 -51.93 -0.42 -0.45 16 31 H 0.07 -0.12 6.66 -51.93 -0.35 -0.47 16 32 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 33 H 0.08 -0.05 8.14 -51.93 -0.42 -0.47 16 34 H 0.38 -1.28 9.08 45.56 0.41 -0.86 16 35 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 36 H 0.07 0.04 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 -0.08 7.67 -51.93 -0.40 -0.48 16 38 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 LS Contribution 304.24 15.07 4.58 4.58 Total: 0.00 -6.95 304.24 -10.58 -17.53 By element: Atomic # 1 Polarization: -4.46 SS G_CDS: -4.68 Total: -9.14 kcal Atomic # 6 Polarization: 2.39 SS G_CDS: -3.73 Total: -1.34 kcal Atomic # 7 Polarization: -3.73 SS G_CDS: -0.75 Total: -4.49 kcal Atomic # 8 Polarization: 0.04 SS G_CDS: -0.92 Total: -0.88 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.08 Total: -6.26 kcal Total LS contribution 4.58 Total: 4.58 kcal Total: -6.95 -10.58 -17.53 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9156392_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.413 kcal (2) G-P(sol) polarization free energy of solvation -6.946 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.527 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.941 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.40 seconds