Wall clock time and date at job start Mon Mar 8 2021 09:51:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 C 1.39148 * 111.00355 * 2 1 4 4 N 1.32339 * 119.71675 * 236.04590 * 3 2 1 5 5 C 1.32008 * 121.64272 * 180.02562 * 4 3 2 6 6 C 1.37988 * 120.90373 * 0.02774 * 5 4 3 7 7 C 1.50699 * 120.32654 * 179.97438 * 6 5 4 8 8 O 1.42907 * 109.46603 * 245.00060 * 7 6 5 9 9 Si 1.86298 * 109.47032 * 4.99363 * 7 6 5 10 10 C 1.38899 * 119.34424 * 0.22751 * 6 5 4 11 11 C 1.38446 * 118.48880 * 359.50553 * 10 6 5 12 12 F 1.35102 * 120.47832 * 180.26171 * 11 10 6 13 13 C 1.46902 * 111.00116 * 236.04570 * 2 1 3 14 14 H 1.09006 * 109.47348 * 178.95636 * 13 2 1 15 15 C 1.53006 * 109.47062 * 298.95702 * 13 2 1 16 16 C 1.53000 * 109.47175 * 179.97438 * 15 13 2 17 17 C 1.52999 * 109.46974 * 299.99840 * 16 15 13 18 18 H 1.09006 * 109.47206 * 300.00111 * 17 16 15 19 19 O 1.42899 * 109.47020 * 180.02562 * 17 16 15 20 20 C 1.53003 * 109.47396 * 60.00057 * 17 16 15 21 21 C 1.52999 * 109.46984 * 58.95480 * 13 2 1 22 22 H 1.08995 * 109.46808 * 59.99789 * 1 2 3 23 23 H 1.08992 * 109.47248 * 179.97438 * 1 2 3 24 24 H 1.09000 * 109.46888 * 300.00084 * 1 2 3 25 25 H 1.08003 * 119.54652 * 179.97438 * 5 4 3 26 26 H 1.08996 * 109.47117 * 124.99973 * 7 6 5 27 27 H 0.96697 * 114.00527 * 59.99993 * 8 7 6 28 28 H 1.48506 * 109.99834 * 58.68765 * 9 7 6 29 29 H 1.48502 * 110.00011 * 180.02562 * 9 7 6 30 30 H 1.07999 * 120.76107 * 179.75252 * 10 6 5 31 31 H 1.09006 * 109.46753 * 299.99729 * 15 13 2 32 32 H 1.09000 * 109.47038 * 59.99331 * 15 13 2 33 33 H 1.08998 * 109.46915 * 59.99906 * 16 15 13 34 34 H 1.08994 * 109.46929 * 180.02562 * 16 15 13 35 35 H 0.96706 * 113.99446 * 179.97438 * 19 17 16 36 36 H 1.08998 * 109.47082 * 59.99573 * 20 17 16 37 37 H 1.08998 * 109.47424 * 179.97438 * 20 17 16 38 38 H 1.09006 * 109.47206 * 300.00243 * 21 13 2 39 39 H 1.08994 * 109.47032 * 60.00515 * 21 13 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9677 1.2990 0.0000 4 7 2.8021 1.6814 -0.9534 5 6 3.2986 2.9040 -0.9899 6 6 2.9630 3.8342 -0.0275 7 6 3.5378 5.2262 -0.0814 8 8 4.3776 5.4390 1.0551 9 14 4.5397 5.4243 -1.6395 10 6 2.0943 3.4732 0.9945 11 6 1.5848 2.1860 1.0042 12 9 0.7325 1.7937 1.9763 13 6 1.9955 -0.7660 -1.1376 14 1 3.0850 -0.7343 -1.1240 15 6 1.5262 -2.2187 -1.0352 16 6 2.0740 -3.0164 -2.2203 17 6 1.5617 -2.4059 -3.5263 18 1 0.4722 -2.4376 -3.5395 19 8 2.0729 -3.1512 -4.6332 20 6 2.0309 -0.9532 -3.6288 21 6 1.4837 -0.1557 -2.4439 22 1 -0.3633 0.5139 -0.8899 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3633 0.5139 0.8900 25 1 3.9773 3.1798 -1.7834 26 1 2.7270 5.9546 -0.0757 27 1 5.1221 4.8250 1.1146 28 1 3.6852 5.1741 -2.8281 29 1 5.1126 6.7928 -1.7044 30 1 1.8193 4.1817 1.7618 31 1 1.8908 -2.6535 -0.1044 32 1 0.4368 -2.2504 -1.0487 33 1 3.1634 -2.9847 -2.2071 34 1 1.7393 -4.0511 -2.1475 35 1 1.7878 -2.8197 -5.4958 36 1 3.1204 -0.9214 -3.6156 37 1 1.6664 -0.5184 -4.5595 38 1 0.3942 -0.1874 -2.4575 39 1 1.8180 0.8792 -2.5169 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9156392_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:51:18 Heat of formation + Delta-G solvation = -65.391053 kcal Electronic energy + Delta-G solvation = -23411.831537 eV Core-core repulsion = 19850.149791 eV Total energy + Delta-G solvation = -3561.681746 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -50.02567 -42.08778 -40.36698 -38.53582 -37.56411 -35.41451 -33.58296 -31.96637 -31.81600 -29.56239 -28.08468 -25.88972 -25.05779 -23.84989 -23.16471 -22.20111 -20.59543 -19.13337 -18.63992 -18.24323 -18.16526 -17.61849 -17.10204 -16.69877 -16.20521 -16.19046 -15.78324 -15.60637 -15.41023 -15.38322 -14.83635 -14.43850 -14.39527 -14.14218 -13.81566 -13.68861 -13.30014 -13.14891 -12.92082 -12.79796 -12.50971 -12.46708 -12.15822 -12.08399 -11.61745 -11.34931 -11.08110 -10.92791 -10.64940 -10.58736 -10.44469 -9.18234 -5.17589 -0.31333 -0.10265 1.10876 1.49350 1.84635 2.12975 2.39654 2.97368 3.08924 3.22770 3.29872 3.43023 3.59688 3.66906 3.72420 3.81892 3.99883 4.01743 4.16893 4.20261 4.23211 4.26521 4.32031 4.38661 4.43451 4.47345 4.54241 4.68746 4.75322 4.80904 4.91934 4.95710 5.03478 5.12565 5.12893 5.19304 5.29179 5.41300 5.54518 5.93054 6.40984 6.62350 6.69544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 N -0.469 5.469 3 C 0.296 3.704 4 N -0.482 5.482 5 C 0.120 3.880 6 C -0.175 4.175 7 C -0.060 4.060 8 O -0.538 6.538 9 Si 0.685 3.315 10 C -0.060 4.060 11 C 0.035 3.965 12 F -0.121 7.121 13 C 0.094 3.906 14 H 0.099 0.901 15 C -0.114 4.114 16 C -0.109 4.109 17 C 0.102 3.898 18 H 0.052 0.948 19 O -0.568 6.568 20 C -0.143 4.143 21 C -0.148 4.148 22 H 0.045 0.955 23 H 0.090 0.910 24 H 0.088 0.912 25 H 0.164 0.836 26 H 0.118 0.882 27 H 0.381 0.619 28 H -0.253 1.253 29 H -0.249 1.249 30 H 0.152 0.848 31 H 0.080 0.920 32 H 0.067 0.933 33 H 0.073 0.927 34 H 0.074 0.926 35 H 0.378 0.622 36 H 0.075 0.925 37 H 0.064 0.936 38 H 0.058 0.942 39 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.288 0.445 -1.612 1.697 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 N -0.184 5.184 3 C 0.063 3.937 4 N -0.196 5.196 5 C -0.037 4.037 6 C -0.178 4.178 7 C -0.171 4.171 8 O -0.343 6.343 9 Si 0.586 3.414 10 C -0.086 4.086 11 C 0.010 3.990 12 F -0.100 7.100 13 C -0.013 4.013 14 H 0.117 0.883 15 C -0.152 4.152 16 C -0.147 4.147 17 C 0.044 3.956 18 H 0.070 0.930 19 O -0.374 6.374 20 C -0.181 4.181 21 C -0.187 4.187 22 H 0.063 0.937 23 H 0.109 0.891 24 H 0.107 0.893 25 H 0.181 0.819 26 H 0.135 0.865 27 H 0.228 0.772 28 H -0.178 1.178 29 H -0.173 1.173 30 H 0.170 0.830 31 H 0.098 0.902 32 H 0.086 0.914 33 H 0.092 0.908 34 H 0.093 0.907 35 H 0.225 0.775 36 H 0.093 0.907 37 H 0.082 0.918 38 H 0.077 0.923 39 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.544 0.092 -1.931 2.008 hybrid contribution -1.472 1.261 0.129 1.943 sum -0.929 1.353 -1.802 2.437 Atomic orbital electron populations 1.22813 0.83806 1.04524 1.02893 1.59370 1.09529 1.07317 1.42157 1.20029 0.94212 0.89451 0.90028 1.67840 1.11995 1.18138 1.21586 1.22484 0.96415 0.87882 0.96896 1.21134 1.01057 0.98579 0.97060 1.24948 0.98125 0.93635 1.00432 1.86531 1.42334 1.59713 1.45708 0.94807 0.86012 0.85569 0.74976 1.21419 0.94448 0.94250 0.98510 1.18111 0.96853 0.94056 0.89960 1.91486 1.67363 1.90956 1.60176 1.21752 1.01091 0.91985 0.86469 0.88266 1.21655 1.01152 0.93599 0.98785 1.21419 1.01911 0.99616 0.91800 1.21869 0.96610 0.90112 0.87055 0.92968 1.86523 1.76179 1.57874 1.16810 1.22142 1.02355 0.95322 0.98289 1.22242 1.00206 1.01821 0.94431 0.93666 0.89109 0.89309 0.81897 0.86488 0.77150 1.17790 1.17347 0.82990 0.90161 0.91394 0.90810 0.90735 0.77461 0.90666 0.91764 0.92334 0.89049 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.00 8.41 60.06 0.51 0.50 16 2 N -0.47 -0.44 4.74 -173.34 -0.82 -1.26 16 3 C 0.30 0.44 6.03 -154.85 -0.93 -0.50 16 4 N -0.48 -0.40 6.48 -12.36 -0.08 -0.48 16 5 C 0.12 -0.11 9.84 -17.57 -0.17 -0.28 16 6 C -0.17 0.17 5.36 -104.47 -0.56 -0.39 16 7 C -0.06 0.10 2.82 36.01 0.10 0.21 16 8 O -0.54 0.56 12.84 -35.23 -0.45 0.11 16 9 Si 0.69 -1.70 29.83 -169.99 -5.07 -6.78 16 10 C -0.06 -0.01 9.82 -39.26 -0.39 -0.39 16 11 C 0.03 0.05 7.00 -39.09 -0.27 -0.22 16 12 F -0.12 -0.28 14.80 2.25 0.03 -0.24 16 13 C 0.09 0.01 1.86 -67.71 -0.13 -0.12 16 14 H 0.10 0.12 7.75 -51.93 -0.40 -0.28 16 15 C -0.11 0.08 5.01 -26.73 -0.13 -0.05 16 16 C -0.11 0.01 5.57 -26.73 -0.15 -0.14 16 17 C 0.10 -0.01 3.47 -26.73 -0.09 -0.11 16 18 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 19 O -0.57 -0.59 13.32 -35.23 -0.47 -1.06 16 20 C -0.14 0.09 5.55 -26.75 -0.15 -0.06 16 21 C -0.15 0.04 4.44 -26.76 -0.12 -0.08 16 22 H 0.04 -0.03 6.51 -51.93 -0.34 -0.36 16 23 H 0.09 -0.14 6.13 -51.93 -0.32 -0.46 16 24 H 0.09 0.01 5.73 -51.93 -0.30 -0.29 16 25 H 0.16 -0.53 4.91 -52.48 -0.26 -0.79 16 26 H 0.12 -0.18 7.96 -51.93 -0.41 -0.59 16 27 H 0.38 -1.82 8.70 45.56 0.40 -1.42 16 28 H -0.25 0.07 7.11 56.52 0.40 0.47 16 29 H -0.25 -0.22 7.11 56.52 0.40 0.18 16 30 H 0.15 -0.12 8.06 -52.49 -0.42 -0.55 16 31 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 32 H 0.07 -0.09 6.34 -51.93 -0.33 -0.42 16 33 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 35 H 0.38 -1.04 9.08 45.56 0.41 -0.63 16 36 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 38 H 0.06 -0.02 6.48 -51.93 -0.34 -0.36 16 39 H 0.09 0.07 5.65 -51.93 -0.29 -0.22 16 LS Contribution 303.54 15.07 4.57 4.57 Total: 0.00 -5.98 303.54 -9.11 -15.08 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -4.33 Total: -8.33 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -2.49 Total: -1.62 kcal Atomic # 7 Polarization: -0.84 SS G_CDS: -0.90 Total: -1.74 kcal Atomic # 8 Polarization: -0.03 SS G_CDS: -0.92 Total: -0.95 kcal Atomic # 9 Polarization: -0.28 SS G_CDS: 0.03 Total: -0.24 kcal Atomic # 14 Polarization: -1.70 SS G_CDS: -5.07 Total: -6.78 kcal Total LS contribution 4.57 Total: 4.57 kcal Total: -5.98 -9.11 -15.08 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9156392_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -50.306 kcal (2) G-P(sol) polarization free energy of solvation -5.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.284 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.107 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.085 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.391 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds