Wall clock time and date at job start Mon Mar 8 2021 08:57:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86300 * 109.46768 * 2 1 4 4 C 1.50699 * 109.47158 * 240.00413 * 2 1 3 5 5 C 1.38610 * 120.71995 * 119.72099 * 4 2 1 6 6 N 1.32279 * 119.19221 * 179.72088 * 5 4 2 7 7 C 1.32492 * 120.74492 * 0.55868 * 6 5 4 8 8 N 1.38400 * 119.22208 * 179.73297 * 7 6 5 9 9 C 1.46506 * 119.99645 * 359.97438 * 8 7 6 10 10 H 1.08994 * 112.84996 * 25.34151 * 9 8 7 11 11 C 1.53781 * 113.60974 * 156.53166 * 9 8 7 12 12 C 1.53770 * 87.08241 * 89.11961 * 11 9 8 13 13 H 1.09006 * 113.61747 * 270.79527 * 12 11 9 14 14 C 1.50707 * 113.61767 * 139.97840 * 12 11 9 15 15 C 1.38240 * 119.98365 * 299.72616 * 14 12 11 16 16 C 1.38213 * 120.00713 * 179.76623 * 15 14 12 17 17 C 1.38356 * 119.98956 * 0.48207 * 16 15 14 18 18 Cl 1.73598 * 120.01369 * 179.74667 * 17 16 15 19 19 C 1.38347 * 119.97310 * 359.76957 * 17 16 15 20 20 C 1.38216 * 119.98475 * 359.97438 * 19 17 16 21 21 C 1.53779 * 113.61660 * 254.13826 * 9 8 7 22 22 N 1.32498 * 121.56037 * 359.71232 * 7 6 5 23 23 C 1.32277 * 120.74331 * 359.97438 * 22 7 6 24 24 H 0.96698 * 114.00355 * 60.00074 * 1 2 3 25 25 H 1.09000 * 109.47411 * 120.00061 * 2 1 3 26 26 H 1.48506 * 110.00048 * 60.00575 * 3 2 1 27 27 H 1.48502 * 109.99996 * 181.31901 * 3 2 1 28 28 H 1.07997 * 120.40216 * 359.97438 * 5 4 2 29 29 H 0.96993 * 120.00364 * 179.97438 * 8 7 6 30 30 H 1.09008 * 113.61101 * 203.67083 * 11 9 8 31 31 H 1.08998 * 113.61537 * 334.56569 * 11 9 8 32 32 H 1.07999 * 119.99512 * 0.02562 * 15 14 12 33 33 H 1.08000 * 120.00702 * 180.25103 * 16 15 14 34 34 H 1.07998 * 120.00839 * 179.97438 * 19 17 16 35 35 H 1.08007 * 119.98980 * 180.02562 * 20 19 17 36 36 H 1.08998 * 113.61208 * 25.43459 * 21 9 8 37 37 H 1.08994 * 113.61437 * 156.33814 * 21 9 8 38 38 H 1.08000 * 120.40082 * 180.02562 * 23 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7243 -0.0494 -2.1555 6 7 3.1532 -0.7037 -3.2221 7 6 2.8238 -1.9722 -3.4164 8 7 3.2855 -2.6247 -4.5462 9 6 4.1277 -1.9126 -5.5106 10 1 4.6735 -1.0819 -5.0635 11 6 5.0089 -2.8414 -6.3625 12 6 3.8378 -2.9113 -7.3564 13 1 3.1326 -3.7151 -7.1445 14 6 4.2683 -2.8762 -8.8003 15 6 4.9668 -1.7869 -9.2866 16 6 5.3661 -1.7564 -10.6095 17 6 5.0579 -2.8117 -11.4494 18 17 5.5534 -2.7710 -13.1127 19 6 4.3543 -3.8992 -10.9634 20 6 3.9601 -3.9310 -9.6390 21 6 3.3957 -1.5402 -6.8107 22 7 2.0631 -2.6310 -2.5545 23 6 1.6061 -2.0371 -1.4645 24 1 -0.3934 0.4417 -0.7650 25 1 1.7923 -0.5138 0.8900 26 1 1.5614 2.4679 1.2086 27 1 3.5344 1.7704 -0.0321 28 1 2.9921 0.9860 -2.0050 29 1 3.0516 -3.5535 -4.6995 30 1 5.8957 -2.3526 -6.7662 31 1 5.2314 -3.7941 -5.8819 32 1 5.2042 -0.9616 -8.6318 33 1 5.9153 -0.9072 -10.9884 34 1 4.1131 -4.7231 -11.6186 35 1 3.4112 -4.7802 -9.2593 36 1 2.3166 -1.4433 -6.6918 37 1 3.8421 -0.6964 -7.3368 38 1 0.9868 -2.5795 -0.7654 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_9610466_12175864.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:57:55 Heat of formation + Delta-G solvation = 83.473767 kcal Electronic energy + Delta-G solvation = -22726.294391 eV Core-core repulsion = 19176.611430 eV Total energy + Delta-G solvation = -3549.682961 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.088 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -42.15755 -41.17323 -39.39449 -37.96859 -37.38111 -35.45355 -34.72345 -32.45310 -32.06027 -31.14209 -26.94323 -26.68621 -26.06069 -25.46099 -23.88903 -23.25174 -22.47418 -20.26421 -19.57135 -18.55353 -18.18551 -17.96249 -16.83001 -16.57939 -16.44313 -16.12730 -16.03062 -15.77138 -15.52368 -15.22825 -14.76363 -14.58095 -14.55168 -14.35132 -14.05044 -13.74146 -13.45108 -13.24350 -13.11195 -12.61119 -12.51718 -12.22493 -11.98481 -11.90676 -11.81322 -11.74731 -11.70818 -11.25077 -11.08262 -10.53692 -10.02598 -10.01170 -9.50247 -9.09128 -4.97971 0.04846 0.12644 0.13924 0.32243 1.16722 1.33553 1.64828 1.79059 2.00176 2.59387 2.78848 3.14883 3.48817 3.54380 3.63077 3.68936 3.71148 3.75054 3.81606 3.86387 3.95081 3.99470 4.22546 4.26413 4.36683 4.44583 4.56287 4.65733 4.72905 4.75879 4.80630 4.85521 4.95241 5.04370 5.08002 5.13675 5.26205 5.27736 5.37623 5.61315 5.80765 5.84299 6.05505 6.40002 6.79606 7.27041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.048 4.048 3 Si 0.769 3.231 4 C -0.287 4.287 5 C 0.194 3.806 6 N -0.574 5.574 7 C 0.554 3.446 8 N -0.674 5.674 9 C 0.136 3.864 10 H 0.102 0.898 11 C -0.127 4.127 12 C -0.069 4.069 13 H 0.104 0.896 14 C -0.067 4.067 15 C -0.105 4.105 16 C -0.117 4.117 17 C -0.056 4.056 18 Cl -0.083 7.083 19 C -0.119 4.119 20 C -0.110 4.110 21 C -0.138 4.138 22 N -0.590 5.590 23 C 0.212 3.788 24 H 0.395 0.605 25 H 0.113 0.887 26 H -0.297 1.297 27 H -0.282 1.282 28 H 0.188 0.812 29 H 0.418 0.582 30 H 0.108 0.892 31 H 0.079 0.921 32 H 0.152 0.848 33 H 0.141 0.859 34 H 0.138 0.862 35 H 0.146 0.854 36 H 0.063 0.937 37 H 0.105 0.895 38 H 0.181 0.819 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.479 1.965 0.299 2.045 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.159 4.159 3 Si 0.674 3.326 4 C -0.295 4.295 5 C 0.027 3.973 6 N -0.296 5.296 7 C 0.198 3.802 8 N -0.310 5.310 9 C 0.030 3.970 10 H 0.120 0.880 11 C -0.166 4.166 12 C -0.087 4.087 13 H 0.122 0.878 14 C -0.067 4.067 15 C -0.123 4.123 16 C -0.135 4.135 17 C -0.083 4.083 18 Cl -0.054 7.054 19 C -0.138 4.138 20 C -0.128 4.128 21 C -0.177 4.177 22 N -0.313 5.313 23 C 0.045 3.955 24 H 0.245 0.755 25 H 0.130 0.870 26 H -0.225 1.225 27 H -0.209 1.209 28 H 0.204 0.796 29 H 0.256 0.744 30 H 0.126 0.874 31 H 0.098 0.902 32 H 0.170 0.830 33 H 0.159 0.841 34 H 0.156 0.844 35 H 0.164 0.836 36 H 0.082 0.918 37 H 0.124 0.876 38 H 0.198 0.802 Dipole moment (debyes) X Y Z Total from point charges 0.597 1.845 0.126 1.944 hybrid contribution -0.289 -0.731 0.544 0.956 sum 0.308 1.114 0.670 1.336 Atomic orbital electron populations 1.86475 1.17206 1.82065 1.50483 1.24803 0.85137 1.10136 0.95834 0.93938 0.77926 0.75175 0.85515 1.21770 1.07630 0.98031 1.02086 1.23195 0.88134 0.99718 0.86291 1.67950 1.28568 1.08517 1.24596 1.19602 0.87175 0.86044 0.87408 1.43894 1.53575 1.14448 1.19115 1.21854 0.91614 0.95837 0.87731 0.87985 1.23419 0.97213 1.00640 0.95282 1.21657 0.98452 0.99243 0.89385 0.87773 1.19979 0.96996 0.93963 0.95790 1.21223 0.97618 0.98903 0.94587 1.21276 1.00520 0.97926 0.93800 1.21175 1.02961 0.98205 0.85932 1.98381 1.90370 1.98559 1.18113 1.21255 0.98127 0.97572 0.96802 1.21289 0.99819 0.99341 0.92348 1.23623 1.01026 0.97125 0.95926 1.67994 1.16861 1.39994 1.06428 1.23115 0.90380 0.91290 0.90753 0.75531 0.86958 1.22489 1.20852 0.79570 0.74373 0.87393 0.90184 0.83035 0.84075 0.84391 0.83619 0.91818 0.87637 0.80204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.53 12.79 -148.98 -1.90 -0.38 16 2 C -0.05 0.17 2.85 71.24 0.20 0.37 16 3 Si 0.77 -3.76 29.87 68.60 2.05 -1.71 16 4 C -0.29 0.38 5.40 -19.69 -0.11 0.27 16 5 C 0.19 -0.17 9.92 84.71 0.84 0.67 16 6 N -0.57 -1.79 9.15 -197.98 -1.81 -3.60 16 7 C 0.55 2.20 8.43 261.49 2.20 4.41 16 8 N -0.67 0.37 5.41 -327.93 -1.77 -1.40 16 9 C 0.14 -0.49 4.30 45.52 0.20 -0.29 16 10 H 0.10 -0.17 7.41 -2.39 -0.02 -0.19 16 11 C -0.13 0.80 7.29 31.12 0.23 1.02 16 12 C -0.07 0.39 3.87 -10.92 -0.04 0.34 16 13 H 0.10 -0.66 8.09 -2.38 -0.02 -0.68 16 14 C -0.07 0.19 5.29 -19.86 -0.11 0.08 16 15 C -0.11 0.30 8.62 22.26 0.19 0.49 16 16 C -0.12 0.00 9.83 22.29 0.22 0.22 16 17 C -0.06 -0.14 6.32 22.32 0.14 0.00 16 18 Cl -0.08 -0.32 28.96 -2.72 -0.08 -0.40 16 19 C -0.12 -0.09 9.83 22.29 0.22 0.13 16 20 C -0.11 0.18 9.71 22.26 0.22 0.40 16 21 C -0.14 0.65 7.27 31.21 0.23 0.88 16 22 N -0.59 -2.90 10.46 -197.99 -2.07 -4.97 16 23 C 0.21 0.31 10.92 84.71 0.93 1.23 16 24 H 0.39 -4.05 8.70 -74.06 -0.64 -4.69 16 25 H 0.11 -0.33 7.96 -2.39 -0.02 -0.34 16 26 H -0.30 -0.90 7.11 99.48 0.71 -0.19 16 27 H -0.28 0.11 7.11 99.48 0.71 0.82 16 28 H 0.19 -1.19 5.04 -2.91 -0.01 -1.21 16 29 H 0.42 -1.04 8.82 -92.71 -0.82 -1.86 16 30 H 0.11 -0.79 7.73 -2.38 -0.02 -0.80 16 31 H 0.08 -0.48 8.14 -2.39 -0.02 -0.50 16 32 H 0.15 -1.08 6.64 -2.91 -0.02 -1.10 16 33 H 0.14 -0.33 8.06 -2.91 -0.02 -0.35 16 34 H 0.14 -0.16 8.06 -2.91 -0.02 -0.18 16 35 H 0.15 -0.78 8.05 -2.91 -0.02 -0.80 16 36 H 0.06 -0.12 8.14 -2.39 -0.02 -0.14 16 37 H 0.11 -0.68 6.30 -2.39 -0.02 -0.70 16 38 H 0.18 -0.33 8.06 -2.91 -0.02 -0.35 16 Total: 0.00 -15.15 335.91 -0.34 -15.49 By element: Atomic # 1 Polarization: -12.95 SS G_CDS: -0.30 Total: -13.26 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: 5.56 Total: 10.23 kcal Atomic # 7 Polarization: -4.32 SS G_CDS: -5.66 Total: -9.98 kcal Atomic # 8 Polarization: 1.53 SS G_CDS: -1.90 Total: -0.38 kcal Atomic # 14 Polarization: -3.76 SS G_CDS: 2.05 Total: -1.71 kcal Atomic # 17 Polarization: -0.32 SS G_CDS: -0.08 Total: -0.40 kcal Total: -15.15 -0.34 -15.49 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9610466_12175864.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.965 kcal (2) G-P(sol) polarization free energy of solvation -15.150 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.814 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.341 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.491 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.474 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.77 seconds