Wall clock time and date at job start Mon Mar 8 2021 10:31:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42905 * 1 3 3 Si 1.86300 * 109.47199 * 2 1 4 4 C 1.50700 * 109.46885 * 239.99805 * 2 1 3 5 5 C 1.33320 * 125.95570 * 300.00019 * 4 2 1 6 6 N 1.32115 * 114.58266 * 180.02562 * 5 4 2 7 7 C 1.29694 * 116.86520 * 359.97438 * 6 5 4 8 8 N 1.38611 * 124.94912 * 179.73887 * 7 6 5 9 9 C 1.46497 * 119.99935 * 0.02562 * 8 7 6 10 10 H 1.09001 * 112.85195 * 23.80005 * 9 8 7 11 11 C 1.53781 * 113.61588 * 155.00431 * 9 8 7 12 12 C 1.53780 * 87.08452 * 89.11230 * 11 9 8 13 13 H 1.08998 * 113.61203 * 270.80228 * 12 11 9 14 14 C 1.50702 * 113.61093 * 139.98003 * 12 11 9 15 15 C 1.38217 * 119.99597 * 299.72708 * 14 12 11 16 16 C 1.38260 * 120.02337 * 179.72816 * 15 14 12 17 17 C 1.38192 * 120.01471 * 0.54916 * 16 15 14 18 18 C 1.38378 * 119.98844 * 359.72506 * 17 16 15 19 19 Cl 1.73598 * 120.01636 * 180.02562 * 18 17 16 20 20 C 1.38235 * 119.98754 * 120.00333 * 14 12 11 21 21 C 1.53785 * 87.07823 * 25.43639 * 12 11 9 22 22 S 1.70961 * 110.09895 * 359.97438 * 7 6 5 23 23 H 0.96708 * 113.99741 * 59.99823 * 1 2 3 24 24 H 1.09004 * 109.46412 * 119.99897 * 2 1 3 25 25 H 1.48497 * 110.00025 * 298.68064 * 3 2 1 26 26 H 1.48509 * 109.99703 * 59.99610 * 3 2 1 27 27 H 1.08003 * 122.70974 * 0.02562 * 5 4 2 28 28 H 0.96998 * 119.99747 * 180.02562 * 8 7 6 29 29 H 1.09008 * 113.61394 * 203.66553 * 11 9 8 30 30 H 1.09003 * 113.61364 * 334.56184 * 11 9 8 31 31 H 1.07998 * 119.98434 * 359.97438 * 15 14 12 32 32 H 1.08000 * 119.99478 * 180.26986 * 16 15 14 33 33 H 1.08001 * 120.00705 * 179.70251 * 17 16 15 34 34 H 1.07999 * 120.01057 * 0.02562 * 20 14 12 35 35 H 1.09004 * 113.60819 * 220.02120 * 21 12 11 36 36 H 1.08994 * 113.61869 * 89.11530 * 21 12 11 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2305 5 6 1.6835 -1.9788 -1.5580 6 7 2.2384 -2.3725 -2.6905 7 6 2.9430 -1.4943 -3.3342 8 7 3.6009 -1.7273 -4.5318 9 6 3.5281 -3.0474 -5.1627 10 1 2.6464 -3.6128 -4.8608 11 6 3.7485 -3.0160 -6.6843 12 6 5.2492 -3.1800 -6.3912 13 1 5.7741 -2.2339 -6.2591 14 6 5.9523 -4.1112 -7.3449 15 6 5.5533 -5.4310 -7.4422 16 6 6.1943 -6.2845 -8.3211 17 6 7.2416 -5.8213 -9.0946 18 6 7.6452 -4.5015 -8.9935 19 17 8.9603 -3.9187 -9.9653 20 6 6.9997 -3.6467 -8.1181 21 6 4.8376 -3.8483 -5.0688 22 16 2.9475 -0.0093 -2.4871 23 1 -0.3933 0.4418 -0.7651 24 1 1.7923 -0.5139 0.8901 25 1 1.5880 2.4585 -1.2242 26 1 1.5614 2.4679 1.2085 27 1 1.0779 -2.6318 -0.9469 28 1 4.1095 -1.0163 -4.9520 29 1 3.3101 -3.8664 -7.2067 30 1 3.4950 -2.0601 -7.1426 31 1 4.7381 -5.7946 -6.8343 32 1 5.8793 -7.3145 -8.3998 33 1 7.7453 -6.4893 -9.7775 34 1 7.3145 -2.6166 -8.0385 35 1 5.4634 -3.5641 -4.2227 36 1 4.6970 -4.9261 -5.1494 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_27_9705208_15704118.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:31:27 Heat of formation + Delta-G solvation = 73.516667 kcal Electronic energy + Delta-G solvation = -21183.950688 eV Core-core repulsion = 17788.414112 eV Total energy + Delta-G solvation = -3395.536576 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 323.049 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.43665 -40.57748 -39.32302 -37.97879 -37.39422 -35.24328 -32.20237 -31.62601 -30.97162 -26.95290 -26.66256 -26.12904 -24.53708 -23.69318 -22.79407 -21.25253 -20.11353 -19.49941 -18.33173 -18.02400 -17.04700 -16.78556 -16.47340 -16.34468 -16.22585 -15.88644 -15.68299 -15.20635 -15.01689 -14.81791 -14.64148 -14.34884 -13.93243 -13.68936 -13.45194 -13.01022 -12.81780 -12.60411 -12.48203 -12.45332 -12.25386 -12.02759 -11.81128 -11.67508 -11.24675 -11.05923 -10.90435 -10.28436 -10.19770 -9.85800 -9.61264 -8.72768 -5.03356 -0.05688 0.02544 0.16140 0.28188 0.67477 1.14538 1.26108 1.55040 1.89124 1.97194 2.15990 2.60104 3.38896 3.44766 3.58154 3.69285 3.72768 3.88191 3.92968 3.97569 4.13657 4.14581 4.29348 4.44245 4.58071 4.62876 4.70226 4.72662 4.78762 4.81549 4.94617 4.99234 5.04177 5.08253 5.25722 5.27316 5.39488 5.57662 5.84540 5.89531 6.16642 6.44453 7.01750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.022 4.022 3 Si 0.723 3.277 4 C -0.306 4.306 5 C 0.104 3.896 6 N -0.576 5.576 7 C 0.317 3.683 8 N -0.668 5.668 9 C 0.136 3.864 10 H 0.093 0.907 11 C -0.126 4.126 12 C -0.068 4.068 13 H 0.108 0.892 14 C -0.060 4.060 15 C -0.116 4.116 16 C -0.107 4.107 17 C -0.128 4.128 18 C -0.048 4.048 19 Cl -0.082 7.082 20 C -0.118 4.118 21 C -0.140 4.140 22 S 0.114 5.886 23 H 0.386 0.614 24 H 0.135 0.865 25 H -0.266 1.266 26 H -0.276 1.276 27 H 0.178 0.822 28 H 0.424 0.576 29 H 0.105 0.895 30 H 0.084 0.916 31 H 0.147 0.853 32 H 0.151 0.849 33 H 0.138 0.862 34 H 0.138 0.862 35 H 0.067 0.933 36 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.204 0.321 -0.828 1.496 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.134 4.134 3 Si 0.625 3.375 4 C -0.429 4.429 5 C -0.047 4.047 6 N -0.302 5.302 7 C -0.053 4.053 8 N -0.308 5.308 9 C 0.028 3.972 10 H 0.111 0.889 11 C -0.165 4.165 12 C -0.086 4.086 13 H 0.126 0.874 14 C -0.061 4.061 15 C -0.133 4.133 16 C -0.125 4.125 17 C -0.146 4.146 18 C -0.075 4.075 19 Cl -0.053 7.053 20 C -0.137 4.137 21 C -0.179 4.179 22 S 0.364 5.636 23 H 0.235 0.765 24 H 0.152 0.848 25 H -0.192 1.192 26 H -0.202 1.202 27 H 0.195 0.805 28 H 0.264 0.736 29 H 0.123 0.877 30 H 0.102 0.898 31 H 0.165 0.835 32 H 0.169 0.831 33 H 0.156 0.844 34 H 0.156 0.844 35 H 0.085 0.915 36 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges 1.586 1.200 -0.848 2.162 hybrid contribution -1.061 -0.493 -0.388 1.233 sum 0.525 0.706 -1.235 1.517 Atomic orbital electron populations 1.86592 1.18199 1.80246 1.50014 1.24261 0.82993 1.10272 0.95904 0.94417 0.90598 0.73319 0.79144 1.25621 1.13231 0.99058 1.04995 1.21443 0.97659 0.93664 0.91923 1.66475 1.18050 1.34630 1.11041 1.23920 0.94880 0.93756 0.92747 1.43755 1.53684 1.14239 1.19078 1.21851 0.98899 0.83189 0.93287 0.88901 1.23427 0.94220 1.04321 0.94495 1.21617 0.95238 0.98088 0.93667 0.87426 1.19800 0.94961 0.94808 0.96484 1.21407 1.00466 0.92920 0.98556 1.21422 0.94769 1.01261 0.95058 1.21305 0.98452 0.93872 1.01018 1.21143 0.93461 0.95319 0.97564 1.98383 1.47629 1.88948 1.70334 1.21128 0.96341 1.00221 0.95987 1.23591 0.96841 1.00776 0.96672 1.83866 1.50864 1.12434 1.16450 0.76453 0.84771 1.19197 1.20151 0.80501 0.73629 0.87672 0.89761 0.83507 0.83093 0.84413 0.84395 0.91463 0.88048 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.10 12.87 -148.98 -1.92 -3.02 16 2 C -0.02 0.02 2.99 71.24 0.21 0.23 16 3 Si 0.72 -1.16 31.05 68.60 2.13 0.97 16 4 C -0.31 -0.25 5.74 24.57 0.14 -0.11 16 5 C 0.10 0.37 11.22 83.54 0.94 1.31 16 6 N -0.58 -3.04 9.83 -202.03 -1.99 -5.02 16 7 C 0.32 0.41 8.09 179.32 1.45 1.86 16 8 N -0.67 2.33 5.42 -327.89 -1.78 0.55 16 9 C 0.14 -0.54 4.44 45.52 0.20 -0.34 16 10 H 0.09 -0.03 7.66 -2.39 -0.02 -0.05 16 11 C -0.13 0.87 7.29 31.12 0.23 1.10 16 12 C -0.07 0.42 3.86 -11.01 -0.04 0.37 16 13 H 0.11 -0.83 8.09 -2.39 -0.02 -0.85 16 14 C -0.06 0.16 5.29 -19.87 -0.11 0.06 16 15 C -0.12 0.40 8.62 22.27 0.19 0.59 16 16 C -0.11 0.27 10.05 22.26 0.22 0.49 16 17 C -0.13 -0.04 9.83 22.29 0.22 0.18 16 18 C -0.05 -0.10 6.32 22.33 0.14 0.04 16 19 Cl -0.08 -0.28 28.96 -2.72 -0.08 -0.36 16 20 C -0.12 0.01 9.49 22.29 0.21 0.23 16 21 C -0.14 0.67 7.25 31.12 0.23 0.90 16 22 S 0.11 -0.14 20.57 -56.49 -1.16 -1.30 16 23 H 0.39 -1.20 8.70 -74.05 -0.64 -1.84 16 24 H 0.13 -0.38 7.96 -2.39 -0.02 -0.40 16 25 H -0.27 -0.57 7.11 99.48 0.71 0.14 16 26 H -0.28 -1.30 7.11 99.48 0.71 -0.59 16 27 H 0.18 0.33 8.06 -2.91 -0.02 0.31 16 28 H 0.42 -3.36 8.83 -92.71 -0.82 -4.18 16 29 H 0.10 -0.77 7.73 -2.38 -0.02 -0.78 16 30 H 0.08 -0.64 8.14 -2.39 -0.02 -0.66 16 31 H 0.15 -1.07 6.64 -2.91 -0.02 -1.09 16 32 H 0.15 -1.02 8.06 -2.91 -0.02 -1.04 16 33 H 0.14 -0.22 8.06 -2.91 -0.02 -0.24 16 34 H 0.14 -0.31 8.05 -2.91 -0.02 -0.33 16 35 H 0.07 -0.16 8.14 -2.39 -0.02 -0.18 16 36 H 0.10 -0.58 6.29 -2.39 -0.02 -0.59 16 Total: 0.00 -12.81 333.82 -0.85 -13.65 By element: Atomic # 1 Polarization: -12.08 SS G_CDS: -0.29 Total: -12.37 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: 4.24 Total: 6.89 kcal Atomic # 7 Polarization: -0.71 SS G_CDS: -3.76 Total: -4.47 kcal Atomic # 8 Polarization: -1.10 SS G_CDS: -1.92 Total: -3.02 kcal Atomic # 14 Polarization: -1.16 SS G_CDS: 2.13 Total: 0.97 kcal Atomic # 16 Polarization: -0.14 SS G_CDS: -1.16 Total: -1.30 kcal Atomic # 17 Polarization: -0.28 SS G_CDS: -0.08 Total: -0.36 kcal Total: -12.81 -0.85 -13.65 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705208_15704118.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 87.168 kcal (2) G-P(sol) polarization free energy of solvation -12.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.362 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.652 kcal (6) G-S(sol) free energy of system = (1) + (5) 73.517 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds