Wall clock time and date at job start Mon Mar 8 2021 10:31:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86295 * 109.47215 * 2 1 4 4 C 1.50697 * 109.47085 * 239.99460 * 2 1 3 5 5 C 1.37987 * 120.32398 * 119.99940 * 4 2 1 6 6 N 1.32008 * 120.90030 * 179.97438 * 5 4 2 7 7 C 1.32333 * 121.64805 * 0.02562 * 6 5 4 8 8 N 1.39139 * 119.71808 * 179.97438 * 7 6 5 9 9 C 1.46506 * 120.00128 * 0.02562 * 8 7 6 10 10 H 1.08998 * 112.85063 * 23.79990 * 9 8 7 11 11 C 1.53781 * 113.61613 * 154.99523 * 9 8 7 12 12 C 1.53786 * 87.17350 * 89.15811 * 11 9 8 13 13 H 1.09000 * 113.60973 * 270.92699 * 12 11 9 14 14 C 1.50690 * 113.61518 * 140.02616 * 12 11 9 15 15 C 1.38228 * 119.98529 * 299.72098 * 14 12 11 16 16 C 1.38268 * 120.04949 * 179.72631 * 15 14 12 17 17 C 1.38173 * 120.02905 * 0.55186 * 16 15 14 18 18 C 1.38485 * 119.96937 * 359.72484 * 17 16 15 19 19 F 1.35103 * 120.02258 * 179.97438 * 18 17 16 20 20 C 1.38219 * 119.99225 * 120.00019 * 14 12 11 21 21 C 1.53781 * 113.68810 * 252.52962 * 9 8 7 22 22 C 1.39341 * 120.56558 * 0.25481 * 7 6 5 23 23 F 1.35097 * 120.47534 * 179.71871 * 22 7 6 24 24 C 1.38448 * 119.05464 * 359.49340 * 22 7 6 25 25 H 0.96699 * 113.99669 * 60.00276 * 1 2 3 26 26 H 1.09004 * 109.46583 * 120.00031 * 2 1 3 27 27 H 1.48502 * 109.99803 * 298.67721 * 3 2 1 28 28 H 1.48501 * 110.00219 * 59.99780 * 3 2 1 29 29 H 1.07997 * 119.54877 * 0.02562 * 5 4 2 30 30 H 0.97003 * 120.00596 * 179.97438 * 8 7 6 31 31 H 1.09002 * 113.61445 * 203.74810 * 11 9 8 32 32 H 1.09002 * 113.61408 * 334.56541 * 11 9 8 33 33 H 1.08000 * 119.97588 * 0.02562 * 15 14 12 34 34 H 1.08000 * 119.98809 * 180.27253 * 16 15 14 35 35 H 1.07996 * 120.02017 * 179.70148 * 17 16 15 36 36 H 1.07998 * 120.01174 * 0.02562 * 20 14 12 37 37 H 1.09005 * 113.61471 * 25.42227 * 21 9 8 38 38 H 1.08996 * 113.61178 * 156.23569 * 21 9 8 39 39 H 1.07991 * 120.75903 * 180.24595 * 24 22 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.7250 -0.0464 -2.1431 6 7 3.1717 -0.6579 -3.2244 7 6 2.8792 -1.9235 -3.4773 8 7 3.3712 -2.5282 -4.6298 9 6 4.2097 -1.7643 -5.5570 10 1 4.7113 -0.9228 -5.0790 11 6 5.1480 -2.6404 -6.4037 12 6 4.0080 -2.7347 -7.4316 13 1 3.3281 -3.5680 -7.2543 14 6 4.4763 -2.6538 -8.8616 15 6 5.1452 -1.5291 -9.3069 16 6 5.5805 -1.4558 -10.6172 17 6 5.3373 -2.5022 -11.4862 18 6 4.6623 -3.6271 -11.0427 19 9 4.4234 -4.6506 -11.8915 20 6 4.2319 -3.7017 -9.7291 21 6 3.4997 -1.3934 -6.8697 22 6 2.0779 -2.6540 -2.6022 23 9 1.7758 -3.9443 -2.8650 24 6 1.5996 -2.0402 -1.4571 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8900 27 1 1.5880 2.4584 -1.2243 28 1 1.5615 2.4679 1.2085 29 1 2.9850 0.9874 -1.9701 30 1 3.1597 -3.4558 -4.8190 31 1 6.0259 -2.1101 -6.7728 32 1 5.3947 -3.5939 -5.9367 33 1 5.3322 -0.7089 -8.6296 34 1 6.1069 -0.5784 -10.9629 35 1 5.6732 -2.4428 -12.5109 36 1 3.7049 -4.5783 -9.3823 37 1 2.4147 -1.3407 -6.7795 38 1 3.9261 -0.5212 -7.3653 39 1 0.9796 -2.5817 -0.7580 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9705264_17656566.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:31:47 Heat of formation + Delta-G solvation = -22.109658 kcal Electronic energy + Delta-G solvation = -25360.534397 eV Core-core repulsion = 21292.590747 eV Total energy + Delta-G solvation = -4067.943650 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 319.112 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -49.89689 -49.80543 -41.68801 -41.02770 -39.18696 -38.04039 -35.53401 -33.24600 -32.40781 -31.55032 -30.78677 -26.97520 -26.82963 -26.14899 -24.84359 -23.79846 -23.05069 -22.63149 -20.38851 -19.54304 -18.72414 -18.32280 -18.11886 -17.58318 -17.35284 -17.11282 -16.99596 -16.51593 -16.37716 -16.27945 -16.11134 -15.71018 -15.47400 -15.19307 -14.82366 -14.64600 -14.34290 -14.18592 -13.99301 -13.88176 -13.65905 -13.46419 -13.13590 -12.86371 -12.79302 -12.68712 -12.07716 -11.99875 -11.85836 -11.38906 -11.23150 -10.79708 -10.66047 -10.56164 -9.95448 -9.63848 -8.81672 -5.03355 -0.09960 0.08460 0.13203 0.19148 1.19581 1.52470 1.86333 1.90827 2.50203 2.52835 3.00324 3.17078 3.22107 3.30908 3.36298 3.52500 3.56813 3.59857 3.75824 3.80744 3.85940 3.93844 4.01031 4.04628 4.14891 4.35630 4.41155 4.43517 4.54897 4.60167 4.66714 4.71045 4.82375 4.83641 4.91012 4.94629 5.02985 5.05200 5.13077 5.30746 5.38767 5.49491 5.88247 5.92990 6.12509 6.32817 6.91315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.062 4.062 3 Si 0.682 3.318 4 C -0.207 4.207 5 C 0.148 3.852 6 N -0.510 5.510 7 C 0.393 3.607 8 N -0.700 5.700 9 C 0.134 3.866 10 H 0.112 0.888 11 C -0.137 4.137 12 C -0.077 4.077 13 H 0.098 0.902 14 C -0.042 4.042 15 C -0.128 4.128 16 C -0.087 4.087 17 C -0.159 4.159 18 C 0.101 3.899 19 F -0.139 7.139 20 C -0.152 4.152 21 C -0.144 4.144 22 C -0.020 4.020 23 F -0.133 7.133 24 C -0.038 4.038 25 H 0.377 0.623 26 H 0.120 0.880 27 H -0.256 1.256 28 H -0.254 1.254 29 H 0.164 0.836 30 H 0.413 0.587 31 H 0.101 0.899 32 H 0.077 0.923 33 H 0.131 0.869 34 H 0.134 0.866 35 H 0.135 0.865 36 H 0.134 0.866 37 H 0.074 0.926 38 H 0.097 0.903 39 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.031 2.632 0.882 4.110 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.336 6.336 2 C -0.172 4.172 3 Si 0.583 3.417 4 C -0.213 4.213 5 C -0.009 4.009 6 N -0.227 5.227 7 C 0.155 3.845 8 N -0.332 5.332 9 C 0.028 3.972 10 H 0.130 0.870 11 C -0.175 4.175 12 C -0.095 4.095 13 H 0.116 0.884 14 C -0.042 4.042 15 C -0.146 4.146 16 C -0.105 4.105 17 C -0.178 4.178 18 C 0.082 3.918 19 F -0.118 7.118 20 C -0.171 4.171 21 C -0.183 4.183 22 C -0.046 4.046 23 F -0.112 7.112 24 C -0.064 4.064 25 H 0.224 0.776 26 H 0.138 0.862 27 H -0.181 1.181 28 H -0.179 1.179 29 H 0.180 0.820 30 H 0.250 0.750 31 H 0.119 0.881 32 H 0.096 0.904 33 H 0.149 0.851 34 H 0.152 0.848 35 H 0.153 0.847 36 H 0.152 0.848 37 H 0.093 0.907 38 H 0.115 0.885 39 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 3.523 3.626 0.681 5.101 hybrid contribution -1.852 -1.613 -0.404 2.489 sum 1.670 2.013 0.276 2.631 Atomic orbital electron populations 1.86613 1.17694 1.79926 1.49377 1.24836 0.83910 1.10813 0.97685 0.95139 0.91529 0.74243 0.80796 1.20880 1.04830 0.95098 1.00444 1.22352 0.91654 0.99178 0.87707 1.67296 1.26370 1.07304 1.21695 1.18390 0.90036 0.89118 0.86986 1.44237 1.54364 1.14308 1.20276 1.21811 0.91346 0.95324 0.88749 0.87044 1.23463 0.97190 1.01172 0.95674 1.21686 0.98304 0.99528 0.90016 0.88359 1.19524 0.96611 0.93186 0.94851 1.21099 0.99248 0.98137 0.96133 1.21044 0.98242 0.98047 0.93121 1.21214 1.01495 0.93486 1.01563 1.17740 1.00013 0.85917 0.88137 1.91523 1.92573 1.57558 1.70145 1.21061 1.03307 1.00663 0.92050 1.23660 1.01662 0.96815 0.96185 1.17999 1.06727 0.81048 0.98838 1.91495 1.92072 1.33758 1.93913 1.21288 0.96204 0.94284 0.94607 0.77574 0.86177 1.18063 1.17851 0.81953 0.75007 0.88074 0.90421 0.85086 0.84800 0.84695 0.84848 0.90737 0.88452 0.83264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.08 12.78 -35.23 -0.45 -0.53 16 2 C -0.06 0.09 2.84 36.00 0.10 0.19 16 3 Si 0.68 -1.54 29.82 -169.99 -5.07 -6.61 16 4 C -0.21 0.16 5.40 -104.47 -0.56 -0.40 16 5 C 0.15 -0.10 9.84 -17.57 -0.17 -0.27 16 6 N -0.51 -0.44 9.13 -12.37 -0.11 -0.56 16 7 C 0.39 0.35 7.49 -154.87 -1.16 -0.81 16 8 N -0.70 0.52 5.42 -53.06 -0.29 0.24 16 9 C 0.13 -0.23 4.35 -67.11 -0.29 -0.52 16 10 H 0.11 -0.12 7.41 -51.93 -0.38 -0.50 16 11 C -0.14 0.36 7.28 -25.92 -0.19 0.17 16 12 C -0.08 0.15 3.87 -90.82 -0.35 -0.20 16 13 H 0.10 -0.22 8.10 -51.93 -0.42 -0.64 16 14 C -0.04 0.02 5.29 -104.64 -0.55 -0.53 16 15 C -0.13 0.15 8.63 -39.57 -0.34 -0.19 16 16 C -0.09 0.07 10.04 -39.59 -0.40 -0.33 16 17 C -0.16 -0.08 10.03 -39.51 -0.40 -0.48 16 18 C 0.10 0.19 7.30 -39.42 -0.29 -0.10 16 19 F -0.14 -0.47 17.27 2.25 0.04 -0.43 16 20 C -0.15 -0.11 9.69 -39.52 -0.38 -0.49 16 21 C -0.14 0.28 7.26 -25.78 -0.19 0.09 16 22 C -0.02 -0.02 7.35 -39.09 -0.29 -0.31 16 23 F -0.13 -0.24 16.65 2.25 0.04 -0.21 16 24 C -0.04 -0.01 9.75 -39.26 -0.38 -0.39 16 25 H 0.38 -0.97 8.70 45.56 0.40 -0.57 16 26 H 0.12 -0.27 7.96 -51.93 -0.41 -0.68 16 27 H -0.26 0.11 7.11 56.52 0.40 0.51 16 28 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 29 H 0.16 -0.47 4.88 -52.49 -0.26 -0.73 16 30 H 0.41 -0.66 8.18 -40.82 -0.33 -1.00 16 31 H 0.10 -0.31 7.73 -51.93 -0.40 -0.71 16 32 H 0.08 -0.19 8.14 -51.93 -0.42 -0.62 16 33 H 0.13 -0.40 6.64 -52.49 -0.35 -0.75 16 34 H 0.13 -0.39 8.06 -52.49 -0.42 -0.82 16 35 H 0.14 -0.10 8.06 -52.49 -0.42 -0.53 16 36 H 0.13 -0.05 8.06 -52.49 -0.42 -0.47 16 37 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 38 H 0.10 -0.25 6.31 -51.93 -0.33 -0.58 16 39 H 0.15 -0.08 8.06 -52.49 -0.42 -0.50 16 LS Contribution 336.09 15.07 5.06 5.06 Total: 0.00 -5.73 336.09 -10.85 -16.57 By element: Atomic # 1 Polarization: -4.75 SS G_CDS: -4.22 Total: -8.97 kcal Atomic # 6 Polarization: 1.27 SS G_CDS: -5.84 Total: -4.57 kcal Atomic # 7 Polarization: 0.08 SS G_CDS: -0.40 Total: -0.32 kcal Atomic # 8 Polarization: -0.08 SS G_CDS: -0.45 Total: -0.53 kcal Atomic # 9 Polarization: -0.71 SS G_CDS: 0.08 Total: -0.64 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.07 Total: -6.61 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -5.73 -10.85 -16.57 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9705264_17656566.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.538 kcal (2) G-P(sol) polarization free energy of solvation -5.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.264 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.572 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds