Wall clock time and date at job start Mon Mar 8 2021 07:13:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38215 * 119.99815 * 2 1 4 4 C 1.50702 * 120.00248 * 359.72401 * 3 2 1 5 5 H 1.09001 * 112.84823 * 9.66218 * 4 3 2 6 6 C 1.53777 * 113.61565 * 140.86483 * 4 3 2 7 7 C 1.53950 * 87.01956 * 139.95104 * 6 4 3 8 8 H 1.09005 * 113.74242 * 220.05855 * 7 6 4 9 9 N 1.46497 * 113.54032 * 89.18798 * 7 6 4 10 10 C 1.38406 * 119.99867 * 107.50290 * 9 7 6 11 11 N 1.32491 * 119.22205 * 359.73513 * 10 9 7 12 12 C 1.32275 * 120.74002 * 179.72105 * 11 10 9 13 13 C 1.38597 * 119.19741 * 0.53715 * 12 11 10 14 14 C 1.50704 * 120.71937 * 179.75616 * 13 12 11 15 15 O 1.42905 * 109.47063 * 244.97874 * 14 13 12 16 16 Si 1.86302 * 109.47223 * 4.97852 * 14 13 12 17 17 C 1.38598 * 118.56200 * 359.73548 * 13 12 11 18 18 N 1.32275 * 119.19593 * 359.97438 * 17 13 12 19 19 C 1.53784 * 87.11263 * 334.63199 * 7 6 4 20 20 C 1.38256 * 119.99734 * 179.97438 * 3 2 1 21 21 C 1.38217 * 120.00088 * 0.02885 * 20 3 2 22 22 C 1.38255 * 120.00155 * 359.97105 * 21 20 3 23 23 C 1.38220 * 119.99677 * 0.02562 * 22 21 20 24 24 H 1.08999 * 109.46988 * 89.99980 * 1 2 3 25 25 H 1.08990 * 109.47415 * 210.00230 * 1 2 3 26 26 H 1.09006 * 109.46768 * 330.00130 * 1 2 3 27 27 H 1.09003 * 113.61118 * 254.53222 * 6 4 3 28 28 H 1.09005 * 113.61688 * 25.42645 * 6 4 3 29 29 H 0.96996 * 119.99893 * 287.50016 * 9 7 6 30 30 H 1.07999 * 120.39647 * 180.29871 * 12 11 10 31 31 H 1.09002 * 109.47062 * 124.98009 * 14 13 12 32 32 H 0.96695 * 113.99623 * 60.00232 * 15 14 13 33 33 H 1.48493 * 110.00025 * 180.02562 * 16 14 13 34 34 H 1.48504 * 109.99728 * 301.32236 * 16 14 13 35 35 H 1.08000 * 120.40811 * 180.02562 * 17 13 12 36 36 H 1.08997 * 113.61594 * 270.81600 * 19 7 6 37 37 H 1.09000 * 113.68886 * 139.91791 * 19 7 6 38 38 H 1.08001 * 120.00211 * 180.02562 * 20 3 2 39 39 H 1.08005 * 120.00044 * 180.02562 * 21 20 3 40 40 H 1.07999 * 120.00170 * 180.02562 * 22 21 20 41 41 H 1.08002 * 119.99600 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1980 1.1970 0.0000 4 6 1.4446 2.5021 -0.0063 5 1 0.3747 2.3740 0.1582 6 6 2.0793 3.5842 0.8831 7 6 1.7356 4.5885 -0.2320 8 1 2.5147 5.3296 -0.4106 9 7 0.4046 5.1845 -0.0927 10 6 0.2756 6.5057 0.2991 11 7 1.3659 7.2156 0.5494 12 6 1.2777 8.4821 0.9205 13 6 0.0259 9.0610 1.0570 14 6 -0.1147 10.4997 1.4831 15 8 -0.7605 10.5584 2.7566 16 14 1.5732 11.2787 1.6063 17 6 -1.0939 8.2883 0.7926 18 7 -0.9356 7.0291 0.4197 19 6 1.7798 3.4010 -1.2082 20 6 3.5806 1.1970 0.0005 21 6 4.2717 0.0000 0.0005 22 6 3.5804 -1.1974 0.0005 23 6 2.1982 -1.1973 0.0000 24 1 -0.3633 0.0000 -1.0277 25 1 -0.3634 -0.8899 0.5138 26 1 -0.3633 0.8901 0.5138 27 1 1.5368 3.7593 1.8122 28 1 3.1504 3.4510 1.0358 29 1 -0.3862 4.6533 -0.2751 30 1 2.1703 9.0570 1.1184 31 1 -0.7113 11.0398 0.7479 32 1 -0.2842 10.0975 3.4606 33 1 1.4484 12.6975 2.0264 34 1 2.4071 10.5320 2.5822 35 1 -2.0838 8.7093 0.8891 36 1 2.7687 3.2177 -1.6282 37 1 0.9964 3.4274 -1.9656 38 1 4.1207 2.1323 0.0010 39 1 5.3517 0.0000 0.0013 40 1 4.1204 -2.1327 0.0008 41 1 1.6583 -2.1327 -0.0004 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_27_9744654_12175864.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:13:47 Heat of formation + Delta-G solvation = 81.456078 kcal Electronic energy + Delta-G solvation = -22997.301808 eV Core-core repulsion = 19651.793527 eV Total energy + Delta-G solvation = -3345.508281 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.142 amu Computer time = 0.49 seconds Orbital eigenvalues (eV) -42.15142 -41.28447 -39.32517 -38.11191 -35.54845 -34.68065 -33.80123 -32.45974 -31.23872 -27.93609 -26.90652 -26.76240 -26.12118 -25.48428 -23.43189 -22.85744 -21.83867 -20.26246 -19.56317 -18.56121 -18.08070 -17.62344 -16.76999 -16.59549 -16.17510 -16.17404 -15.99072 -15.75761 -15.61013 -15.01605 -14.89219 -14.57823 -14.40803 -13.99705 -13.98507 -13.83194 -13.50326 -13.28581 -13.15821 -12.92197 -12.68818 -12.24103 -12.09759 -11.94956 -11.84302 -11.73213 -11.53390 -11.29378 -11.09172 -10.72145 -10.00622 -9.66670 -9.43095 -9.10893 -5.03348 0.06504 0.17098 0.44672 0.50018 1.21264 1.51158 1.76290 1.90808 2.79388 2.82759 3.12918 3.31592 3.43710 3.59007 3.65029 3.65882 3.71560 3.78841 3.90345 3.97292 4.02488 4.11803 4.18721 4.21716 4.37240 4.53682 4.56922 4.59625 4.67302 4.69132 4.72388 4.76604 4.81025 4.89324 4.95929 4.97827 5.10806 5.17470 5.25628 5.33501 5.61353 5.65121 5.77282 5.81393 6.02319 6.13191 6.33767 6.40504 7.29974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.119 4.119 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.078 4.078 5 H 0.101 0.899 6 C -0.144 4.144 7 C 0.136 3.864 8 H 0.111 0.889 9 N -0.677 5.677 10 C 0.570 3.430 11 N -0.560 5.560 12 C 0.198 3.802 13 C -0.292 4.292 14 C -0.053 4.053 15 O -0.530 6.530 16 Si 0.680 3.320 17 C 0.224 3.776 18 N -0.570 5.570 19 C -0.136 4.136 20 C -0.113 4.113 21 C -0.124 4.124 22 C -0.120 4.120 23 C -0.119 4.119 24 H 0.071 0.929 25 H 0.066 0.934 26 H 0.069 0.931 27 H 0.072 0.928 28 H 0.096 0.904 29 H 0.414 0.586 30 H 0.167 0.833 31 H 0.120 0.880 32 H 0.376 0.624 33 H -0.253 1.253 34 H -0.258 1.258 35 H 0.170 0.830 36 H 0.100 0.900 37 H 0.076 0.924 38 H 0.123 0.877 39 H 0.121 0.879 40 H 0.121 0.879 41 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.580 -0.290 -1.853 2.453 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C -0.083 4.083 3 C -0.072 4.072 4 C -0.096 4.096 5 H 0.119 0.881 6 C -0.183 4.183 7 C 0.030 3.970 8 H 0.129 0.871 9 N -0.312 5.312 10 C 0.214 3.786 11 N -0.282 5.282 12 C 0.030 3.970 13 C -0.301 4.301 14 C -0.164 4.164 15 O -0.336 6.336 16 Si 0.581 3.419 17 C 0.056 3.944 18 N -0.291 5.291 19 C -0.174 4.174 20 C -0.131 4.131 21 C -0.142 4.142 22 C -0.138 4.138 23 C -0.137 4.137 24 H 0.090 0.910 25 H 0.085 0.915 26 H 0.087 0.913 27 H 0.090 0.910 28 H 0.114 0.886 29 H 0.252 0.748 30 H 0.183 0.817 31 H 0.138 0.862 32 H 0.223 0.777 33 H -0.178 1.178 34 H -0.182 1.182 35 H 0.187 0.813 36 H 0.118 0.882 37 H 0.095 0.905 38 H 0.141 0.859 39 H 0.139 0.861 40 H 0.139 0.861 41 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 2.006 -0.625 -1.985 2.891 hybrid contribution -0.775 -0.032 1.252 1.472 sum 1.231 -0.657 -0.734 1.577 Atomic orbital electron populations 1.20876 0.91350 1.02872 1.02474 1.19795 0.96017 0.92682 0.99780 1.19517 0.93473 0.93755 1.00490 1.21692 0.99789 0.90877 0.97264 0.88128 1.23630 1.01908 0.94814 0.97981 1.21892 0.84436 0.94518 0.96191 0.87136 1.43828 1.08755 1.06870 1.71778 1.19354 0.84790 0.87091 0.87371 1.67928 1.31788 1.07952 1.20557 1.22848 0.96663 0.89438 0.88058 1.21643 0.95849 1.00064 1.12501 1.24675 1.10016 0.94503 0.87242 1.86614 1.50605 1.78076 1.18297 0.95181 0.76020 0.80067 0.90675 1.22841 0.99235 0.86860 0.85505 1.67984 1.24478 1.14693 1.21951 1.23447 1.03552 0.93996 0.96386 1.20984 0.93559 0.98162 1.00392 1.21147 0.99957 0.92510 1.00545 1.21169 0.94336 0.98209 1.00104 1.21060 0.94354 0.97500 1.00812 0.91028 0.91495 0.91252 0.90957 0.88609 0.74776 0.81661 0.86213 0.77668 1.17779 1.18243 0.81263 0.88189 0.90501 0.85946 0.86056 0.86091 0.86109 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.08 9.51 36.01 0.34 0.43 16 2 C -0.08 -0.08 5.88 -104.62 -0.62 -0.70 16 3 C -0.07 -0.04 5.29 -104.62 -0.55 -0.60 16 4 C -0.08 0.07 3.57 -90.96 -0.33 -0.25 16 5 H 0.10 -0.13 5.75 -51.93 -0.30 -0.43 16 6 C -0.14 0.10 7.27 -25.83 -0.19 -0.09 16 7 C 0.14 -0.10 4.34 -67.03 -0.29 -0.39 16 8 H 0.11 0.00 7.37 -51.93 -0.38 -0.38 16 9 N -0.68 -0.24 5.41 -54.91 -0.30 -0.54 16 10 C 0.57 1.34 8.43 -322.80 -2.72 -1.37 16 11 N -0.56 -1.18 9.13 -13.93 -0.13 -1.30 16 12 C 0.20 0.04 9.92 -17.23 -0.17 -0.13 16 13 C -0.29 0.07 5.36 -104.35 -0.56 -0.49 16 14 C -0.05 0.07 2.83 36.01 0.10 0.17 16 15 O -0.53 -0.11 12.85 -35.23 -0.45 -0.56 16 16 Si 0.68 -1.33 29.95 -169.99 -5.09 -6.42 16 17 C 0.22 0.20 10.99 -17.23 -0.19 0.01 16 18 N -0.57 -1.49 10.46 -13.93 -0.15 -1.63 16 19 C -0.14 0.22 7.29 -25.91 -0.19 0.03 16 20 C -0.11 -0.05 8.53 -39.58 -0.34 -0.39 16 21 C -0.12 -0.09 10.05 -39.58 -0.40 -0.49 16 22 C -0.12 -0.11 10.05 -39.58 -0.40 -0.51 16 23 C -0.12 -0.13 9.70 -39.58 -0.38 -0.52 16 24 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 25 H 0.07 -0.07 8.08 -51.93 -0.42 -0.49 16 26 H 0.07 -0.09 6.01 -51.93 -0.31 -0.40 16 27 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 28 H 0.10 -0.11 6.40 -51.93 -0.33 -0.44 16 29 H 0.41 -0.26 8.82 -40.82 -0.36 -0.62 16 30 H 0.17 -0.34 5.01 -52.49 -0.26 -0.61 16 31 H 0.12 -0.27 7.96 -51.93 -0.41 -0.69 16 32 H 0.38 -0.87 8.70 45.56 0.40 -0.48 16 33 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 34 H -0.26 0.03 7.02 56.52 0.40 0.43 16 35 H 0.17 -0.16 8.06 -52.49 -0.42 -0.58 16 36 H 0.10 -0.18 7.63 -51.93 -0.40 -0.58 16 37 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 38 H 0.12 -0.14 6.73 -52.49 -0.35 -0.49 16 39 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 40 H 0.12 -0.08 8.06 -52.49 -0.42 -0.50 16 41 H 0.12 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 336.06 15.07 5.06 5.06 Total: 0.00 -6.11 336.06 -13.22 -19.33 By element: Atomic # 1 Polarization: -3.35 SS G_CDS: -5.30 Total: -8.65 kcal Atomic # 6 Polarization: 1.59 SS G_CDS: -6.87 Total: -5.29 kcal Atomic # 7 Polarization: -2.90 SS G_CDS: -0.57 Total: -3.47 kcal Atomic # 8 Polarization: -0.11 SS G_CDS: -0.45 Total: -0.56 kcal Atomic # 14 Polarization: -1.33 SS G_CDS: -5.09 Total: -6.42 kcal Total LS contribution 5.06 Total: 5.06 kcal Total: -6.11 -13.22 -19.33 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_27_9744654_12175864.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 100.784 kcal (2) G-P(sol) polarization free energy of solvation -6.109 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.219 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.328 kcal (6) G-S(sol) free energy of system = (1) + (5) 81.456 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.49 seconds