Wall clock time and date at job start Mon Mar 8 2021 07:55:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53002 * 1 3 3 C 1.53007 * 109.47060 * 2 1 4 4 C 1.52994 * 109.47111 * 240.00185 * 2 1 3 5 5 O 1.42898 * 109.47356 * 119.99986 * 2 1 3 6 6 C 1.42896 * 114.00107 * 59.99786 * 5 2 1 7 7 H 1.09010 * 112.84696 * 18.80619 * 6 5 2 8 8 C 1.53781 * 113.61709 * 149.99990 * 6 5 2 9 9 C 1.53781 * 87.08182 * 139.98262 * 8 6 5 10 10 H 1.09006 * 113.61188 * 89.19835 * 9 8 6 11 11 C 1.52997 * 113.61747 * 220.02065 * 9 8 6 12 12 O 1.42898 * 109.47319 * 183.47437 * 11 9 8 13 13 C 1.35900 * 117.00172 * 179.97438 * 12 11 9 14 14 C 1.38703 * 120.05607 * 0.02562 * 13 12 11 15 15 C 1.38161 * 119.94842 * 180.02562 * 14 13 12 16 16 C 1.50699 * 119.97632 * 179.97438 * 15 14 13 17 17 F 1.39899 * 109.47145 * 359.97438 * 16 15 14 18 18 F 1.39900 * 109.47446 * 119.99676 * 16 15 14 19 19 F 1.39907 * 109.46919 * 239.99886 * 16 15 14 20 20 C 1.38250 * 120.05475 * 359.97438 * 15 14 13 21 21 C 1.38287 * 120.10826 * 0.02562 * 20 15 14 22 22 C 1.50695 * 119.97151 * 179.97438 * 21 20 15 23 23 O 1.42897 * 109.47621 * 65.00080 * 22 21 20 24 24 Si 1.86301 * 109.47315 * 185.00503 * 22 21 20 25 25 C 1.38131 * 120.05760 * 359.68459 * 21 20 15 26 26 C 1.53785 * 87.17639 * 334.61363 * 9 8 6 27 27 H 1.09002 * 109.47081 * 300.00482 * 1 2 3 28 28 H 1.09001 * 109.46712 * 60.00026 * 1 2 3 29 29 H 1.08999 * 109.46915 * 179.97438 * 1 2 3 30 30 H 1.08994 * 109.47239 * 179.97438 * 3 2 1 31 31 H 1.09001 * 109.47035 * 300.00312 * 3 2 1 32 32 H 1.09000 * 109.46831 * 59.99871 * 3 2 1 33 33 H 1.08999 * 109.47187 * 299.99779 * 4 2 1 34 34 H 1.09001 * 109.47504 * 60.00274 * 4 2 1 35 35 H 1.09007 * 109.46987 * 179.97438 * 4 2 1 36 36 H 1.09004 * 113.61071 * 25.43572 * 8 6 5 37 37 H 1.08994 * 113.61382 * 254.53486 * 8 6 5 38 38 H 1.09002 * 109.47153 * 63.47130 * 11 9 8 39 39 H 1.09001 * 109.46832 * 303.47320 * 11 9 8 40 40 H 1.08006 * 120.02590 * 0.02562 * 14 13 12 41 41 H 1.07997 * 119.94517 * 180.02562 * 20 15 14 42 42 H 1.09005 * 109.46891 * 305.00268 * 22 21 20 43 43 H 0.96703 * 113.99805 * 59.99561 * 23 22 21 44 44 H 1.48497 * 110.00005 * 180.02562 * 24 22 21 45 45 H 1.48498 * 109.99618 * 301.31772 * 24 22 21 46 46 H 1.07990 * 120.02583 * 180.31954 * 25 21 20 47 47 H 1.08990 * 113.61776 * 139.93339 * 26 9 8 48 48 H 1.09003 * 113.61076 * 270.84347 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4426 0.0000 4 6 2.0400 -0.7212 -1.2492 5 8 2.0064 -0.6736 1.1667 6 6 1.5848 -2.0354 1.2645 7 1 1.2523 -2.4451 0.3106 8 6 2.5838 -2.9378 2.0078 9 6 1.3668 -3.6119 2.6632 10 1 0.9746 -4.4541 2.0930 11 6 1.5713 -3.9402 4.1435 12 8 0.4245 -4.6328 4.6406 13 6 0.4448 -5.0004 5.9488 14 6 1.5453 -4.7002 6.7378 15 6 1.5638 -5.0754 8.0673 16 6 2.7595 -4.7500 8.9249 17 9 3.7130 -4.0721 8.1579 18 9 2.3601 -3.9414 9.9944 19 9 3.3156 -5.9351 9.4186 20 6 0.4863 -5.7492 8.6116 21 6 -0.6122 -6.0497 7.8271 22 6 -1.7848 -6.7847 8.4235 23 8 -2.4001 -5.9691 9.4226 24 14 -3.0231 -7.1681 7.0855 25 6 -0.6380 -5.6714 6.4989 26 6 0.6053 -2.2976 2.4231 27 1 -0.3633 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 3.1300 1.4426 0.0005 31 1 1.6766 1.9564 -0.8900 32 1 1.6766 1.9564 0.8900 33 1 1.6767 -1.7489 -1.2492 34 1 1.6767 -0.2073 -2.1392 35 1 3.1301 -0.7208 -1.2494 36 1 3.2172 -2.3997 2.7130 37 1 3.1477 -3.5992 1.3502 38 1 1.7092 -3.0161 4.7049 39 1 2.4537 -4.5698 4.2575 40 1 2.3872 -4.1735 6.3131 41 1 0.5024 -6.0412 9.6512 42 1 -1.4390 -7.7143 8.8757 43 1 -2.7322 -5.1238 9.0905 44 1 -4.1847 -7.8924 7.6609 45 1 -3.4784 -5.9108 6.4396 46 1 -1.4982 -5.9018 5.8881 47 1 -0.4255 -2.4429 2.1002 48 1 0.6969 -1.5841 3.2421 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10339940_14598386.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:55:19 Heat of formation + Delta-G solvation = -216.982328 kcal Electronic energy + Delta-G solvation = -32951.634819 eV Core-core repulsion = 27945.566023 eV Total energy + Delta-G solvation = -5006.068796 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.159 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -51.14385 -48.66993 -48.58994 -41.71939 -40.90380 -39.46821 -38.26301 -37.50329 -33.98521 -33.60381 -31.79381 -29.56533 -28.45168 -28.37303 -27.27661 -27.11065 -26.72868 -24.08745 -23.32839 -22.32201 -20.90817 -20.77370 -19.84815 -19.46202 -19.45120 -18.19794 -17.97378 -17.74043 -17.47339 -17.16377 -17.06763 -16.54371 -16.16957 -16.00436 -15.83491 -15.70366 -15.48926 -15.31351 -15.03241 -14.77749 -14.74942 -14.71527 -14.56552 -14.53189 -14.16540 -13.84392 -13.77745 -13.54202 -13.44065 -13.38903 -13.18555 -13.10600 -12.89294 -12.74050 -12.66381 -12.57937 -12.38932 -12.14230 -11.99723 -11.87325 -11.75755 -11.46177 -11.27977 -10.76602 -10.44050 -10.40661 -9.52655 -5.03983 -0.36769 0.02712 1.13916 1.51362 1.59375 1.85050 1.88918 2.17212 2.64431 2.66634 2.95183 3.23706 3.33001 3.39560 3.43189 3.44807 3.65033 3.66971 3.69602 3.82819 3.85410 3.89858 3.94622 4.00629 4.01754 4.03421 4.10165 4.24511 4.30705 4.40878 4.49529 4.50792 4.58490 4.66541 4.69315 4.70858 4.75664 4.83262 4.83646 4.86024 4.90038 4.91805 5.04024 5.04398 5.06180 5.21556 5.24889 5.27884 5.32010 6.11329 6.27651 6.35544 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.127 4.127 9 C -0.109 4.109 10 H 0.106 0.894 11 C 0.067 3.933 12 O -0.304 6.304 13 C 0.141 3.859 14 C -0.161 4.161 15 C -0.140 4.140 16 C 0.509 3.491 17 F -0.176 7.176 18 F -0.173 7.173 19 F -0.173 7.173 20 C -0.081 4.081 21 C -0.079 4.079 22 C -0.075 4.075 23 O -0.525 6.525 24 Si 0.688 3.312 25 C -0.121 4.121 26 C -0.149 4.149 27 H 0.064 0.936 28 H 0.066 0.934 29 H 0.058 0.942 30 H 0.064 0.936 31 H 0.071 0.929 32 H 0.063 0.937 33 H 0.059 0.941 34 H 0.068 0.932 35 H 0.065 0.935 36 H 0.094 0.906 37 H 0.079 0.921 38 H 0.069 0.931 39 H 0.070 0.930 40 H 0.146 0.854 41 H 0.140 0.860 42 H 0.126 0.874 43 H 0.378 0.622 44 H -0.253 1.253 45 H -0.257 1.257 46 H 0.145 0.855 47 H 0.073 0.927 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.679 -0.767 -5.410 5.507 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.237 4.237 5 O -0.280 6.280 6 C 0.004 3.996 7 H 0.111 0.889 8 C -0.164 4.164 9 C -0.128 4.128 10 H 0.124 0.876 11 C -0.008 4.008 12 O -0.217 6.217 13 C 0.095 3.905 14 C -0.180 4.180 15 C -0.142 4.142 16 C 0.454 3.546 17 F -0.158 7.158 18 F -0.154 7.154 19 F -0.154 7.154 20 C -0.099 4.099 21 C -0.079 4.079 22 C -0.185 4.185 23 O -0.331 6.331 24 Si 0.588 3.412 25 C -0.139 4.139 26 C -0.186 4.186 27 H 0.083 0.917 28 H 0.085 0.915 29 H 0.077 0.923 30 H 0.083 0.917 31 H 0.090 0.910 32 H 0.082 0.918 33 H 0.078 0.922 34 H 0.087 0.913 35 H 0.084 0.916 36 H 0.113 0.887 37 H 0.098 0.902 38 H 0.087 0.913 39 H 0.088 0.912 40 H 0.164 0.836 41 H 0.158 0.842 42 H 0.143 0.857 43 H 0.226 0.774 44 H -0.177 1.177 45 H -0.182 1.182 46 H 0.162 0.838 47 H 0.092 0.908 48 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges -1.334 -1.070 -5.319 5.588 hybrid contribution 0.216 1.089 0.625 1.274 sum -1.119 0.019 -4.694 4.826 Atomic orbital electron populations 1.22472 0.95461 1.02522 1.02936 1.21543 0.93240 0.93281 0.85352 1.21773 1.02029 0.93210 1.02636 1.22473 1.02349 1.00847 0.97991 1.88036 1.73794 1.23250 1.42952 1.23600 0.95526 0.82889 0.97591 0.88941 1.23231 0.96322 0.97341 0.99538 1.22324 0.98739 0.98218 0.93490 0.87560 1.22950 0.87044 0.96169 0.94598 1.86118 1.42453 1.71605 1.21557 1.18648 0.93382 0.94678 0.83769 1.21122 0.99727 1.03846 0.93309 1.19759 0.95082 1.04783 0.94536 1.18235 0.82948 0.74687 0.78689 1.93178 1.66706 1.80662 1.75225 1.93246 1.90556 1.73809 1.57807 1.93246 1.86735 1.46940 1.88473 1.20674 0.91368 0.97089 1.00777 1.20045 0.96416 0.98728 0.92758 1.25075 0.97037 0.96248 1.00120 1.86636 1.77664 1.33721 1.35120 0.94859 0.80112 0.85265 0.80923 1.20555 0.98319 1.00197 0.94824 1.23656 0.99099 0.96238 0.99637 0.91678 0.91514 0.92278 0.91738 0.91041 0.91765 0.92215 0.91333 0.91578 0.88735 0.90246 0.91305 0.91209 0.83626 0.84196 0.85653 0.77404 1.17740 1.18158 0.83760 0.90842 0.89091 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.16 8.38 37.16 0.31 0.47 16 2 C 0.10 -0.03 1.11 -90.62 -0.10 -0.13 16 3 C -0.14 0.08 8.84 37.16 0.33 0.41 16 4 C -0.18 0.20 8.38 37.15 0.31 0.51 16 5 O -0.36 -0.41 10.00 -35.23 -0.35 -0.76 16 6 C 0.06 -0.05 2.82 -25.82 -0.07 -0.13 16 7 H 0.09 -0.15 5.54 -51.92 -0.29 -0.44 16 8 C -0.13 0.23 7.48 -25.92 -0.19 0.03 16 9 C -0.11 0.21 4.00 -89.81 -0.36 -0.15 16 10 H 0.11 -0.24 8.14 -51.93 -0.42 -0.67 16 11 C 0.07 -0.10 4.57 37.16 0.17 0.07 16 12 O -0.30 -0.05 10.14 -19.43 -0.20 -0.24 16 13 C 0.14 0.04 6.69 -39.22 -0.26 -0.22 16 14 C -0.16 -0.05 8.42 -39.44 -0.33 -0.38 16 15 C -0.14 -0.14 5.37 -104.65 -0.56 -0.70 16 16 C 0.51 0.91 3.32 36.01 0.12 1.03 16 17 F -0.18 -0.34 15.97 2.25 0.04 -0.31 16 18 F -0.17 -0.47 17.24 2.25 0.04 -0.43 16 19 F -0.17 -0.42 17.24 2.25 0.04 -0.38 16 20 C -0.08 -0.04 9.23 -39.56 -0.37 -0.40 16 21 C -0.08 0.04 5.35 -104.65 -0.56 -0.52 16 22 C -0.08 0.09 2.80 36.00 0.10 0.19 16 23 O -0.53 -0.19 12.83 -35.23 -0.45 -0.64 16 24 Si 0.69 -1.18 29.89 -169.99 -5.08 -6.26 16 25 C -0.12 0.06 8.61 -39.43 -0.34 -0.28 16 26 C -0.15 0.16 7.48 -25.82 -0.19 -0.03 16 27 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 28 H 0.07 -0.11 8.14 -51.93 -0.42 -0.53 16 29 H 0.06 -0.07 7.02 -51.93 -0.36 -0.43 16 30 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 31 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.06 -0.09 6.24 -51.93 -0.32 -0.42 16 34 H 0.07 -0.12 8.14 -51.93 -0.42 -0.54 16 35 H 0.07 -0.04 8.14 -51.92 -0.42 -0.47 16 36 H 0.09 -0.13 8.10 -51.93 -0.42 -0.55 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.07 -0.12 7.39 -51.93 -0.38 -0.50 16 39 H 0.07 -0.17 7.66 -51.93 -0.40 -0.57 16 40 H 0.15 -0.13 5.40 -52.48 -0.28 -0.41 16 41 H 0.14 0.00 8.06 -52.49 -0.42 -0.42 16 42 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 43 H 0.38 -0.91 8.70 45.56 0.40 -0.52 16 44 H -0.25 -0.39 7.11 56.52 0.40 0.01 16 45 H -0.26 -0.05 7.00 56.52 0.40 0.34 16 46 H 0.15 -0.26 4.84 -52.49 -0.25 -0.51 16 47 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 48 H 0.09 -0.02 7.92 -51.93 -0.41 -0.43 16 LS Contribution 396.51 15.07 5.98 5.98 Total: 0.00 -4.99 396.51 -8.99 -13.99 By element: Atomic # 1 Polarization: -3.71 SS G_CDS: -7.00 Total: -10.71 kcal Atomic # 6 Polarization: 1.77 SS G_CDS: -2.00 Total: -0.23 kcal Atomic # 8 Polarization: -0.64 SS G_CDS: -1.00 Total: -1.65 kcal Atomic # 9 Polarization: -1.23 SS G_CDS: 0.11 Total: -1.11 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.08 Total: -6.26 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -4.99 -8.99 -13.99 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10339940_14598386.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -202.997 kcal (2) G-P(sol) polarization free energy of solvation -4.994 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -207.991 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.991 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -216.982 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds