Wall clock time and date at job start Mon Mar 8 2021 07:52:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47048 * 2 1 4 4 C 1.53005 * 109.47088 * 240.00209 * 2 1 3 5 5 O 1.42902 * 109.47215 * 120.00373 * 2 1 3 6 6 C 1.42898 * 114.00209 * 60.00072 * 5 2 1 7 7 H 1.09001 * 112.84988 * 341.19876 * 6 5 2 8 8 C 1.53776 * 113.61427 * 112.50253 * 6 5 2 9 9 C 1.53778 * 87.08349 * 139.98325 * 8 6 5 10 10 H 1.08998 * 113.69026 * 89.12122 * 9 8 6 11 11 C 1.53001 * 113.61736 * 220.02082 * 9 8 6 12 12 O 1.42899 * 109.47186 * 272.49484 * 11 9 8 13 13 C 1.35921 * 117.00184 * 179.97438 * 12 11 9 14 14 C 1.38817 * 120.06050 * 179.97438 * 13 12 11 15 15 Cl 1.73596 * 120.03514 * 0.02562 * 14 13 12 16 16 C 1.38253 * 119.92082 * 180.02562 * 14 13 12 17 17 C 1.50706 * 119.97361 * 179.97438 * 16 14 13 18 18 O 1.42895 * 109.46938 * 284.99787 * 17 16 14 19 19 Si 1.86299 * 109.46748 * 164.99951 * 17 16 14 20 20 C 1.38247 * 120.04445 * 0.25464 * 16 14 13 21 21 C 1.38270 * 120.11829 * 359.49508 * 20 16 14 22 22 C 1.38155 * 120.07703 * 0.50326 * 21 20 16 23 23 C 1.53777 * 113.61380 * 210.00110 * 6 5 2 24 24 H 1.08995 * 109.47267 * 299.99209 * 1 2 3 25 25 H 1.09000 * 109.47413 * 60.00073 * 1 2 3 26 26 H 1.09005 * 109.47104 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.47482 * 180.02562 * 3 2 1 28 28 H 1.09003 * 109.47305 * 300.00584 * 3 2 1 29 29 H 1.09002 * 109.46709 * 60.00061 * 3 2 1 30 30 H 1.08999 * 109.47536 * 299.99949 * 4 2 1 31 31 H 1.09003 * 109.46741 * 59.99736 * 4 2 1 32 32 H 1.08998 * 109.46982 * 179.97438 * 4 2 1 33 33 H 1.08997 * 113.61770 * 25.42966 * 8 6 5 34 34 H 1.09000 * 113.61541 * 254.53226 * 8 6 5 35 35 H 1.08990 * 109.47148 * 152.49356 * 11 9 8 36 36 H 1.09006 * 109.46868 * 32.49301 * 11 9 8 37 37 H 1.09000 * 109.47161 * 45.00052 * 17 16 14 38 38 H 0.96698 * 114.00355 * 299.99977 * 18 17 16 39 39 H 1.48504 * 109.99999 * 179.97438 * 19 17 16 40 40 H 1.48501 * 110.00135 * 301.31786 * 19 17 16 41 41 H 1.08002 * 119.93815 * 179.72197 * 20 16 14 42 42 H 1.07998 * 119.96221 * 180.25763 * 21 20 16 43 43 H 1.07998 * 120.02263 * 179.72778 * 22 21 20 44 44 H 1.09000 * 113.61603 * 105.47297 * 23 6 5 45 45 H 1.09000 * 113.69387 * 334.57441 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5847 -2.0356 1.2644 7 1 0.7236 -2.2583 0.6343 8 6 2.7335 -3.0478 1.1212 9 6 2.0563 -3.8558 2.2407 10 1 1.3246 -4.5779 1.8785 11 6 3.0421 -4.4604 3.2426 12 8 3.4766 -5.7377 2.7718 13 6 4.3620 -6.4139 3.5504 14 6 4.8258 -7.6608 3.1540 15 17 4.2760 -8.3585 1.6626 16 6 5.7260 -8.3463 3.9485 17 6 6.2298 -9.7003 3.5196 18 8 5.2065 -10.6763 3.7255 19 14 7.7305 -10.1520 4.5268 20 6 6.1598 -7.7930 5.1388 21 6 5.7030 -6.5488 5.5328 22 6 4.8034 -5.8594 4.7428 23 6 1.4333 -2.5312 2.7122 24 1 -0.3633 0.5137 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1299 1.4426 -0.0005 28 1 1.6765 1.9564 -0.8899 29 1 1.6766 1.9562 0.8900 30 1 1.6767 -1.7489 -1.2494 31 1 1.6766 -0.2073 -2.1393 32 1 3.1300 -0.7208 -1.2495 33 1 3.7072 -2.6457 1.4006 34 1 2.7464 -3.5604 0.1593 35 1 2.5522 -4.5768 4.2092 36 1 3.9030 -3.8002 3.3487 37 1 6.4966 -9.6708 2.4632 38 1 4.9192 -10.7570 4.6452 39 1 8.2367 -11.4857 4.1140 40 1 8.7905 -9.1277 4.3463 41 1 6.8596 -8.3319 5.7603 42 1 6.0468 -6.1171 6.4612 43 1 4.4438 -4.8896 5.0535 44 1 0.3965 -2.6268 3.0349 45 1 2.0510 -1.9886 3.4278 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10544594_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:52:52 Heat of formation + Delta-G solvation = -74.199202 kcal Electronic energy + Delta-G solvation = -25655.454598 eV Core-core repulsion = 21859.677096 eV Total energy + Delta-G solvation = -3795.777502 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.132 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -41.53677 -40.82574 -39.34328 -38.18423 -37.22460 -37.18662 -33.93294 -32.45616 -31.50365 -29.32625 -28.42622 -28.31458 -26.90984 -26.68364 -24.04620 -23.77193 -22.22384 -20.85201 -20.68858 -19.24596 -18.03665 -17.83617 -17.45761 -17.20839 -17.08125 -16.55456 -16.21305 -15.97434 -15.71045 -15.42324 -15.15733 -14.68139 -14.56546 -14.49482 -14.14986 -13.94021 -13.54673 -13.48507 -13.37002 -13.18317 -13.09830 -12.89571 -12.74693 -12.65885 -12.59310 -12.41568 -12.23137 -12.17411 -11.94060 -11.91181 -11.74675 -11.48095 -11.40209 -11.23596 -10.46747 -10.37915 -9.90533 -9.24657 -5.05527 -0.01570 0.19076 1.23681 1.30210 1.64238 1.91467 2.04152 2.45478 2.69791 3.37021 3.42022 3.49342 3.56940 3.68944 3.71013 3.79369 3.85404 3.91494 3.92925 3.99090 4.03713 4.07023 4.16672 4.25922 4.33427 4.44092 4.45604 4.53309 4.60776 4.64031 4.70326 4.72513 4.73709 4.78137 4.85533 4.88368 4.96043 4.96661 5.05828 5.06988 5.11788 5.24921 5.25808 5.27636 5.32916 5.48692 6.22100 6.38100 6.58442 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.362 6.362 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.148 4.148 9 C -0.109 4.109 10 H 0.105 0.895 11 C 0.071 3.929 12 O -0.300 6.300 13 C 0.142 3.858 14 C -0.050 4.050 15 Cl -0.044 7.044 16 C -0.076 4.076 17 C -0.071 4.071 18 O -0.529 6.529 19 Si 0.690 3.310 20 C -0.143 4.143 21 C -0.068 4.068 22 C -0.196 4.196 23 C -0.126 4.126 24 H 0.065 0.935 25 H 0.068 0.932 26 H 0.059 0.941 27 H 0.063 0.937 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.058 0.942 31 H 0.066 0.934 32 H 0.064 0.936 33 H 0.090 0.910 34 H 0.072 0.928 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.117 0.883 38 H 0.378 0.622 39 H -0.251 1.251 40 H -0.255 1.255 41 H 0.139 0.861 42 H 0.137 0.863 43 H 0.139 0.861 44 H 0.078 0.922 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.975 2.690 3.860 4.805 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.237 4.237 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.185 4.185 9 C -0.128 4.128 10 H 0.123 0.877 11 C -0.004 4.004 12 O -0.213 6.213 13 C 0.095 3.905 14 C -0.077 4.077 15 Cl -0.015 7.015 16 C -0.077 4.077 17 C -0.181 4.181 18 O -0.334 6.334 19 Si 0.591 3.409 20 C -0.161 4.161 21 C -0.086 4.086 22 C -0.215 4.215 23 C -0.164 4.164 24 H 0.084 0.916 25 H 0.087 0.913 26 H 0.078 0.922 27 H 0.082 0.918 28 H 0.089 0.911 29 H 0.082 0.918 30 H 0.077 0.923 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.109 0.891 34 H 0.091 0.909 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.134 0.866 38 H 0.225 0.775 39 H -0.176 1.176 40 H -0.179 1.179 41 H 0.156 0.844 42 H 0.155 0.845 43 H 0.156 0.844 44 H 0.097 0.903 45 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.078 2.407 2.996 3.844 hybrid contribution -0.480 0.308 -0.710 0.911 sum -0.558 2.715 2.286 3.593 Atomic orbital electron populations 1.22471 0.95628 1.02465 1.03090 1.21540 0.93113 0.93244 0.85515 1.21770 1.02018 0.93208 1.02617 1.22473 1.02324 1.00791 0.97820 1.88030 1.73768 1.23374 1.42922 1.23564 0.97061 0.81845 0.97101 0.88968 1.23615 0.99378 0.96432 0.99108 1.22314 0.97991 0.95841 0.96626 0.87664 1.22897 0.97513 0.82182 0.97841 1.86174 1.56882 1.32014 1.46206 1.18700 0.90643 0.90699 0.90456 1.20034 1.02137 0.93166 0.92396 1.98386 1.88502 1.83604 1.31045 1.20135 0.96124 0.97083 0.94342 1.25162 1.00474 0.85530 1.06971 1.86576 1.56981 1.57101 1.32718 0.94902 0.76189 0.80745 0.89094 1.20849 1.02377 0.96834 0.96063 1.21023 0.94724 0.93744 0.99156 1.21304 1.02708 1.02298 0.95146 1.23228 1.01841 0.94167 0.97134 0.91590 0.91337 0.92222 0.91769 0.91052 0.91755 0.92268 0.91519 0.91674 0.89108 0.90890 0.91417 0.91415 0.86591 0.77527 1.17623 1.17946 0.84416 0.84485 0.84368 0.90347 0.88793 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.12 8.38 37.16 0.31 0.43 16 2 C 0.10 0.02 1.11 -90.62 -0.10 -0.08 16 3 C -0.14 0.04 8.84 37.16 0.33 0.37 16 4 C -0.18 0.06 8.38 37.16 0.31 0.37 16 5 O -0.36 -0.58 10.00 -35.23 -0.35 -0.93 16 6 C 0.06 -0.01 2.82 -25.92 -0.07 -0.08 16 7 H 0.09 -0.07 5.54 -51.93 -0.29 -0.36 16 8 C -0.15 0.01 7.46 -25.92 -0.19 -0.19 16 9 C -0.11 0.09 4.01 -89.80 -0.36 -0.27 16 10 H 0.11 -0.06 8.14 -51.93 -0.42 -0.49 16 11 C 0.07 -0.04 4.58 37.16 0.17 0.13 16 12 O -0.30 -0.67 9.60 -19.49 -0.19 -0.86 16 13 C 0.14 0.30 6.68 -39.20 -0.26 0.04 16 14 C -0.05 -0.14 6.33 -39.36 -0.25 -0.39 16 15 Cl -0.04 -0.18 27.14 -51.86 -1.41 -1.59 16 16 C -0.08 -0.08 5.26 -104.61 -0.55 -0.63 16 17 C -0.07 -0.05 2.09 36.01 0.08 0.02 16 18 O -0.53 -0.51 12.83 -35.23 -0.45 -0.96 16 19 Si 0.69 -0.64 29.92 -169.99 -5.09 -5.73 16 20 C -0.14 0.14 8.66 -39.57 -0.34 -0.20 16 21 C -0.07 0.09 10.04 -39.60 -0.40 -0.31 16 22 C -0.20 0.02 9.04 -39.44 -0.36 -0.33 16 23 C -0.13 0.15 7.47 -25.92 -0.19 -0.05 16 24 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 25 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 26 H 0.06 -0.06 6.25 -51.93 -0.32 -0.38 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 0.00 8.14 -51.93 -0.42 -0.43 16 30 H 0.06 -0.02 7.02 -51.93 -0.36 -0.39 16 31 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 32 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 33 H 0.09 0.05 7.90 -51.93 -0.41 -0.36 16 34 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 35 H 0.07 -0.12 7.66 -51.93 -0.40 -0.52 16 36 H 0.07 -0.08 7.36 -51.93 -0.38 -0.47 16 37 H 0.12 0.23 7.41 -51.93 -0.38 -0.15 16 38 H 0.38 -1.21 8.70 45.56 0.40 -0.82 16 39 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 40 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 41 H 0.14 -0.50 5.13 -52.49 -0.27 -0.77 16 42 H 0.14 -0.52 8.06 -52.49 -0.42 -0.95 16 43 H 0.14 -0.29 6.30 -52.49 -0.33 -0.62 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.09 -0.10 8.10 -51.93 -0.42 -0.52 16 LS Contribution 371.69 15.07 5.60 5.60 Total: 0.00 -5.98 371.69 -10.79 -16.77 By element: Atomic # 1 Polarization: -4.11 SS G_CDS: -7.02 Total: -11.13 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: -1.88 Total: -1.18 kcal Atomic # 8 Polarization: -1.75 SS G_CDS: -0.99 Total: -2.74 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.09 Total: -5.73 kcal Atomic # 17 Polarization: -0.18 SS G_CDS: -1.41 Total: -1.59 kcal Total LS contribution 5.60 Total: 5.60 kcal Total: -5.98 -10.79 -16.77 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10544594_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.434 kcal (2) G-P(sol) polarization free energy of solvation -5.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.411 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.789 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.765 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.199 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds