Wall clock time and date at job start Mon Mar 8 2021 07:52:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 C 1.52997 * 109.47048 * 2 1 4 4 C 1.53005 * 109.47088 * 240.00209 * 2 1 3 5 5 O 1.42902 * 109.47215 * 120.00373 * 2 1 3 6 6 C 1.42898 * 114.00209 * 60.00072 * 5 2 1 7 7 H 1.09001 * 112.84988 * 341.19876 * 6 5 2 8 8 C 1.53776 * 113.61427 * 112.50253 * 6 5 2 9 9 C 1.53778 * 87.08349 * 139.98325 * 8 6 5 10 10 H 1.08998 * 113.69026 * 89.12122 * 9 8 6 11 11 C 1.53001 * 113.61736 * 220.02082 * 9 8 6 12 12 O 1.42899 * 109.47186 * 272.49484 * 11 9 8 13 13 C 1.35921 * 117.00184 * 179.97438 * 12 11 9 14 14 C 1.38817 * 120.06050 * 179.97438 * 13 12 11 15 15 Cl 1.73596 * 120.03514 * 0.02562 * 14 13 12 16 16 C 1.38253 * 119.92082 * 180.02562 * 14 13 12 17 17 C 1.50706 * 119.97361 * 179.97438 * 16 14 13 18 18 O 1.42895 * 109.46938 * 284.99787 * 17 16 14 19 19 Si 1.86299 * 109.46748 * 164.99951 * 17 16 14 20 20 C 1.38247 * 120.04445 * 0.25464 * 16 14 13 21 21 C 1.38270 * 120.11829 * 359.49508 * 20 16 14 22 22 C 1.38155 * 120.07703 * 0.50326 * 21 20 16 23 23 C 1.53777 * 113.61380 * 210.00110 * 6 5 2 24 24 H 1.08995 * 109.47267 * 299.99209 * 1 2 3 25 25 H 1.09000 * 109.47413 * 60.00073 * 1 2 3 26 26 H 1.09005 * 109.47104 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.47482 * 180.02562 * 3 2 1 28 28 H 1.09003 * 109.47305 * 300.00584 * 3 2 1 29 29 H 1.09002 * 109.46709 * 60.00061 * 3 2 1 30 30 H 1.08999 * 109.47536 * 299.99949 * 4 2 1 31 31 H 1.09003 * 109.46741 * 59.99736 * 4 2 1 32 32 H 1.08998 * 109.46982 * 179.97438 * 4 2 1 33 33 H 1.08997 * 113.61770 * 25.42966 * 8 6 5 34 34 H 1.09000 * 113.61541 * 254.53226 * 8 6 5 35 35 H 1.08990 * 109.47148 * 152.49356 * 11 9 8 36 36 H 1.09006 * 109.46868 * 32.49301 * 11 9 8 37 37 H 1.09000 * 109.47161 * 45.00052 * 17 16 14 38 38 H 0.96698 * 114.00355 * 299.99977 * 18 17 16 39 39 H 1.48504 * 109.99999 * 179.97438 * 19 17 16 40 40 H 1.48501 * 110.00135 * 301.31786 * 19 17 16 41 41 H 1.08002 * 119.93815 * 179.72197 * 20 16 14 42 42 H 1.07998 * 119.96221 * 180.25763 * 21 20 16 43 43 H 1.07998 * 120.02263 * 179.72778 * 22 21 20 44 44 H 1.09000 * 113.61603 * 105.47297 * 23 6 5 45 45 H 1.09000 * 113.69387 * 334.57441 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4425 0.0000 4 6 2.0400 -0.7212 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5847 -2.0356 1.2644 7 1 0.7236 -2.2583 0.6343 8 6 2.7335 -3.0478 1.1212 9 6 2.0563 -3.8558 2.2407 10 1 1.3246 -4.5779 1.8785 11 6 3.0421 -4.4604 3.2426 12 8 3.4766 -5.7377 2.7718 13 6 4.3620 -6.4139 3.5504 14 6 4.8258 -7.6608 3.1540 15 17 4.2760 -8.3585 1.6626 16 6 5.7260 -8.3463 3.9485 17 6 6.2298 -9.7003 3.5196 18 8 5.2065 -10.6763 3.7255 19 14 7.7305 -10.1520 4.5268 20 6 6.1598 -7.7930 5.1388 21 6 5.7030 -6.5488 5.5328 22 6 4.8034 -5.8594 4.7428 23 6 1.4333 -2.5312 2.7122 24 1 -0.3633 0.5137 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1299 1.4426 -0.0005 28 1 1.6765 1.9564 -0.8899 29 1 1.6766 1.9562 0.8900 30 1 1.6767 -1.7489 -1.2494 31 1 1.6766 -0.2073 -2.1393 32 1 3.1300 -0.7208 -1.2495 33 1 3.7072 -2.6457 1.4006 34 1 2.7464 -3.5604 0.1593 35 1 2.5522 -4.5768 4.2092 36 1 3.9030 -3.8002 3.3487 37 1 6.4966 -9.6708 2.4632 38 1 4.9192 -10.7570 4.6452 39 1 8.2367 -11.4857 4.1140 40 1 8.7905 -9.1277 4.3463 41 1 6.8596 -8.3319 5.7603 42 1 6.0468 -6.1171 6.4612 43 1 4.4438 -4.8896 5.0535 44 1 0.3965 -2.6268 3.0349 45 1 2.0510 -1.9886 3.4278 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_10544594_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:52:51 Heat of formation + Delta-G solvation = -68.466940 kcal Electronic energy + Delta-G solvation = -25655.206028 eV Core-core repulsion = 21859.677096 eV Total energy + Delta-G solvation = -3795.528932 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 327.132 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.53166 -40.81546 -39.35342 -38.17778 -37.39534 -37.19663 -33.94023 -32.44282 -31.49187 -29.29662 -28.38362 -28.28302 -26.92077 -26.64844 -24.02642 -23.75344 -22.21414 -20.83922 -20.65510 -19.24926 -18.05534 -17.83989 -17.43913 -17.20987 -17.07667 -16.54521 -16.23710 -15.96865 -15.69544 -15.42219 -15.12914 -14.67334 -14.55852 -14.49358 -14.20522 -13.96286 -13.50907 -13.45473 -13.33114 -13.13042 -13.06417 -12.87021 -12.73292 -12.67562 -12.61804 -12.46959 -12.25144 -12.18373 -12.01994 -11.89402 -11.70706 -11.59002 -11.37319 -11.20573 -10.48724 -10.38753 -9.91612 -9.27640 -5.01719 -0.01030 0.20388 1.17766 1.25290 1.66352 1.92733 2.05618 2.48420 2.72182 3.40188 3.45865 3.53424 3.62217 3.74516 3.75259 3.86932 3.88625 3.95594 3.98042 4.07156 4.09075 4.12246 4.23081 4.30380 4.38607 4.43565 4.51156 4.59133 4.64886 4.68462 4.75160 4.76032 4.76251 4.82946 4.89447 4.91458 4.98730 5.00590 5.10093 5.12782 5.16823 5.28792 5.30475 5.30756 5.36239 5.58334 6.23465 6.38882 6.77380 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.098 3.902 3 C -0.139 4.139 4 C -0.174 4.174 5 O -0.380 6.380 6 C 0.060 3.940 7 H 0.098 0.902 8 C -0.149 4.149 9 C -0.104 4.104 10 H 0.102 0.898 11 C 0.068 3.932 12 O -0.321 6.321 13 C 0.124 3.876 14 C -0.078 4.078 15 Cl -0.071 7.071 16 C -0.084 4.084 17 C -0.086 4.086 18 O -0.548 6.548 19 Si 0.800 3.200 20 C -0.141 4.141 21 C -0.062 4.062 22 C -0.197 4.197 23 C -0.118 4.118 24 H 0.062 0.938 25 H 0.076 0.924 26 H 0.061 0.939 27 H 0.056 0.944 28 H 0.083 0.917 29 H 0.060 0.940 30 H 0.058 0.942 31 H 0.075 0.925 32 H 0.055 0.945 33 H 0.082 0.918 34 H 0.065 0.935 35 H 0.082 0.918 36 H 0.073 0.927 37 H 0.095 0.905 38 H 0.395 0.605 39 H -0.298 1.298 40 H -0.282 1.282 41 H 0.168 0.832 42 H 0.171 0.829 43 H 0.158 0.842 44 H 0.088 0.912 45 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.903 3.337 5.726 6.689 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.060 3.940 3 C -0.196 4.196 4 C -0.232 4.232 5 O -0.299 6.299 6 C 0.002 3.998 7 H 0.115 0.885 8 C -0.187 4.187 9 C -0.123 4.123 10 H 0.120 0.880 11 C -0.006 4.006 12 O -0.234 6.234 13 C 0.077 3.923 14 C -0.105 4.105 15 Cl -0.042 7.042 16 C -0.085 4.085 17 C -0.194 4.194 18 O -0.355 6.355 19 Si 0.704 3.296 20 C -0.158 4.158 21 C -0.080 4.080 22 C -0.216 4.216 23 C -0.155 4.155 24 H 0.081 0.919 25 H 0.095 0.905 26 H 0.080 0.920 27 H 0.076 0.924 28 H 0.102 0.898 29 H 0.079 0.921 30 H 0.077 0.923 31 H 0.094 0.906 32 H 0.075 0.925 33 H 0.101 0.899 34 H 0.083 0.917 35 H 0.100 0.900 36 H 0.092 0.908 37 H 0.112 0.888 38 H 0.245 0.755 39 H -0.227 1.227 40 H -0.209 1.209 41 H 0.185 0.815 42 H 0.188 0.812 43 H 0.175 0.825 44 H 0.107 0.893 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -0.043 3.070 4.872 5.759 hybrid contribution -0.485 0.110 -1.306 1.397 sum -0.528 3.180 3.566 4.807 Atomic orbital electron populations 1.22447 0.94889 1.02727 1.03337 1.21670 0.93744 0.93347 0.85264 1.21791 1.01601 0.93143 1.03086 1.22450 1.01740 1.00877 0.98109 1.88004 1.74263 1.24106 1.43570 1.23657 0.96988 0.81172 0.97993 0.88455 1.23590 0.99216 0.96784 0.99113 1.22259 0.97804 0.95870 0.96328 0.87999 1.23021 0.97806 0.81388 0.98374 1.86143 1.57223 1.33003 1.47066 1.18930 0.91187 0.90730 0.91419 1.20333 1.03829 0.94187 0.92163 1.98362 1.88948 1.84053 1.32873 1.20285 0.96075 0.97118 0.95038 1.25437 1.01681 0.85768 1.06523 1.86531 1.57297 1.57131 1.34572 0.93748 0.72632 0.76240 0.87028 1.21204 1.02209 0.97145 0.95285 1.21469 0.93445 0.93245 0.99855 1.21611 1.02627 1.03089 0.94276 1.23183 1.02422 0.93466 0.96470 0.91926 0.90473 0.91961 0.92438 0.89803 0.92061 0.92345 0.90583 0.92548 0.89920 0.91656 0.89954 0.90840 0.88780 0.75526 1.22652 1.20876 0.81522 0.81155 0.82469 0.89300 0.88672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.26 8.38 71.98 0.60 0.86 16 2 C 0.10 0.07 1.11 -10.79 -0.01 0.06 16 3 C -0.14 0.04 8.84 71.98 0.64 0.67 16 4 C -0.17 0.02 8.38 71.98 0.60 0.62 16 5 O -0.38 -1.43 10.00 -148.98 -1.49 -2.92 16 6 C 0.06 0.01 2.82 31.12 0.09 0.10 16 7 H 0.10 -0.12 5.54 -2.39 -0.01 -0.13 16 8 C -0.15 -0.16 7.46 31.12 0.23 0.07 16 9 C -0.10 0.11 4.01 -10.27 -0.04 0.07 16 10 H 0.10 -0.03 8.14 -2.39 -0.02 -0.05 16 11 C 0.07 -0.07 4.58 71.98 0.33 0.26 16 12 O -0.32 -1.77 9.60 -92.66 -0.89 -2.66 16 13 C 0.12 0.59 6.68 22.52 0.15 0.74 16 14 C -0.08 -0.54 6.33 22.41 0.14 -0.40 16 15 Cl -0.07 -0.75 27.14 -2.72 -0.07 -0.82 16 16 C -0.08 -0.19 5.26 -19.86 -0.10 -0.30 16 17 C -0.09 -0.19 2.09 71.24 0.15 -0.04 16 18 O -0.55 -1.48 12.83 -148.98 -1.91 -3.39 16 19 Si 0.80 -1.84 29.92 68.60 2.05 0.21 16 20 C -0.14 0.51 8.66 22.28 0.19 0.70 16 21 C -0.06 0.30 10.04 22.26 0.22 0.52 16 22 C -0.20 0.27 9.04 22.36 0.20 0.48 16 23 C -0.12 0.29 7.47 31.12 0.23 0.52 16 24 H 0.06 -0.04 8.14 -2.39 -0.02 -0.06 16 25 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 26 H 0.06 -0.13 6.25 -2.38 -0.01 -0.14 16 27 H 0.06 0.06 8.14 -2.39 -0.02 0.04 16 28 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 29 H 0.06 0.02 8.14 -2.39 -0.02 0.00 16 30 H 0.06 0.00 7.02 -2.39 -0.02 -0.02 16 31 H 0.08 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 33 H 0.08 0.21 7.90 -2.39 -0.02 0.20 16 34 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 35 H 0.08 -0.35 7.66 -2.39 -0.02 -0.37 16 36 H 0.07 -0.18 7.36 -2.38 -0.02 -0.20 16 37 H 0.09 0.58 7.41 -2.39 -0.02 0.56 16 38 H 0.39 -2.55 8.70 -74.06 -0.64 -3.19 16 39 H -0.30 -1.61 7.11 99.48 0.71 -0.90 16 40 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 41 H 0.17 -1.69 5.13 -2.91 -0.01 -1.71 16 42 H 0.17 -1.97 8.06 -2.91 -0.02 -1.99 16 43 H 0.16 -0.93 6.30 -2.91 -0.02 -0.95 16 44 H 0.09 -0.39 8.14 -2.39 -0.02 -0.41 16 45 H 0.09 -0.24 8.10 -2.39 -0.02 -0.25 16 Total: 0.00 -16.38 371.69 1.70 -14.68 By element: Atomic # 1 Polarization: -10.42 SS G_CDS: 0.38 Total: -10.04 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: 3.63 Total: 4.94 kcal Atomic # 8 Polarization: -4.69 SS G_CDS: -4.29 Total: -8.98 kcal Atomic # 14 Polarization: -1.84 SS G_CDS: 2.05 Total: 0.21 kcal Atomic # 17 Polarization: -0.75 SS G_CDS: -0.07 Total: -0.82 kcal Total: -16.38 1.70 -14.68 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10544594_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.788 kcal (2) G-P(sol) polarization free energy of solvation -16.377 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -70.165 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.698 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.678 kcal (6) G-S(sol) free energy of system = (1) + (5) -68.467 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds