Wall clock time and date at job start Mon Mar 8 2021 08:43:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.46672 * 2 1 4 4 C 1.50702 * 109.46966 * 240.00348 * 2 1 3 5 5 C 1.38239 * 119.97946 * 104.99769 * 4 2 1 6 6 C 1.38285 * 120.11971 * 179.97438 * 5 4 2 7 7 C 1.38153 * 120.07157 * 359.97438 * 6 5 4 8 8 C 1.38701 * 119.95853 * 0.02562 * 7 6 5 9 9 O 1.35929 * 120.05652 * 179.97438 * 8 7 6 10 10 C 1.42899 * 117.00083 * 359.97438 * 9 8 7 11 11 C 1.53000 * 109.46879 * 179.97438 * 10 9 8 12 12 H 1.09002 * 109.47538 * 305.00265 * 11 10 9 13 13 C 1.52999 * 109.47235 * 65.00623 * 11 10 9 14 14 C 1.53000 * 109.47235 * 179.97438 * 13 11 10 15 15 C 1.53003 * 109.46676 * 299.99481 * 14 13 11 16 16 H 1.08997 * 109.47332 * 299.99857 * 15 14 13 17 17 O 1.42903 * 109.46719 * 180.02562 * 15 14 13 18 18 C 1.53001 * 109.47229 * 60.00299 * 15 14 13 19 19 C 1.52995 * 109.46845 * 299.99948 * 18 15 14 20 20 C 1.38255 * 119.97429 * 285.01755 * 4 2 1 21 21 Cl 1.73604 * 120.04140 * 359.97438 * 20 4 2 22 22 H 0.96704 * 114.00504 * 60.00074 * 1 2 3 23 23 H 1.08993 * 109.47566 * 119.99640 * 2 1 3 24 24 H 1.48503 * 109.99942 * 298.67754 * 3 2 1 25 25 H 1.48491 * 110.00216 * 60.00428 * 3 2 1 26 26 H 1.08005 * 119.94398 * 359.97438 * 5 4 2 27 27 H 1.08001 * 119.96311 * 179.72594 * 6 5 4 28 28 H 1.08003 * 120.01779 * 179.97438 * 7 6 5 29 29 H 1.08999 * 109.47445 * 299.99977 * 10 9 8 30 30 H 1.09002 * 109.46759 * 60.00383 * 10 9 8 31 31 H 1.09002 * 109.46550 * 299.99584 * 13 11 10 32 32 H 1.09002 * 109.47150 * 59.99404 * 13 11 10 33 33 H 1.09005 * 109.47072 * 179.97438 * 14 13 11 34 34 H 1.08997 * 109.47124 * 59.99465 * 14 13 11 35 35 H 0.96697 * 114.00460 * 59.99703 * 17 15 14 36 36 H 1.08993 * 109.46971 * 179.97438 * 18 15 14 37 37 H 1.09002 * 109.46972 * 59.99846 * 18 15 14 38 38 H 1.09002 * 109.47251 * 299.99726 * 19 18 15 39 39 H 1.09005 * 109.46869 * 179.97438 * 19 18 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4536 0.0174 -2.2834 6 6 2.9159 -0.6315 -3.4137 7 6 2.8573 -2.0094 -3.4935 8 6 2.3337 -2.7427 -2.4390 9 8 2.2747 -4.0985 -2.5156 10 6 2.7691 -4.7029 -3.7124 11 6 2.6215 -6.2226 -3.6149 12 1 3.1167 -6.5786 -2.7115 13 6 1.1368 -6.5883 -3.5606 14 6 0.9891 -8.1081 -3.4637 15 6 1.6308 -8.7618 -4.6892 16 1 1.1354 -8.4055 -5.5924 17 8 1.4923 -10.1813 -4.5991 18 6 3.1155 -8.3962 -4.7437 19 6 3.2631 -6.8764 -4.8404 20 6 1.8689 -2.0894 -1.3058 21 17 1.2130 -3.0033 0.0165 22 1 -0.3934 0.4417 -0.7651 23 1 1.7923 -0.5137 0.8899 24 1 1.5877 2.4586 -1.2243 25 1 1.5614 2.4679 1.2085 26 1 2.5009 1.0947 -2.2231 27 1 3.3194 -0.0601 -4.2366 28 1 3.2181 -2.5153 -4.3769 29 1 2.2000 -4.3362 -4.5666 30 1 3.8212 -4.4479 -3.8402 31 1 0.6796 -6.1221 -2.6878 32 1 0.6416 -6.2322 -4.4640 33 1 -0.0686 -8.3686 -3.4245 34 1 1.4845 -8.4644 -2.5606 35 1 0.5752 -10.4854 -4.5608 36 1 3.5726 -8.8623 -5.6164 37 1 3.6108 -8.7526 -3.8405 38 1 2.7678 -6.5200 -5.7436 39 1 4.3209 -6.6159 -4.8787 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10544594_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:43:26 Heat of formation + Delta-G solvation = -111.639207 kcal Electronic energy + Delta-G solvation = -22213.889894 eV Core-core repulsion = 18727.564110 eV Total energy + Delta-G solvation = -3486.325784 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.101 amu Computer time = 0.54 seconds Orbital eigenvalues (eV) -41.51475 -40.25524 -39.13429 -37.47291 -37.23725 -36.66354 -32.50727 -32.33499 -31.90439 -30.71736 -27.37622 -26.30529 -24.02309 -23.67486 -22.97462 -21.82735 -20.96667 -19.31788 -18.23432 -18.10007 -17.60125 -17.29372 -17.15569 -16.44372 -16.19249 -15.63461 -15.54027 -15.35018 -15.15750 -14.88974 -14.50823 -14.20175 -14.01440 -13.74867 -13.40127 -13.30110 -13.17340 -12.80107 -12.70529 -12.43464 -12.24682 -12.20126 -12.04300 -11.73115 -11.69495 -11.65861 -11.48145 -11.17816 -10.75806 -10.64457 -9.93403 -9.27296 -4.99558 -0.03716 0.17063 1.20550 1.28321 1.53351 1.88204 2.01805 2.42857 3.11175 3.32951 3.48363 3.52799 3.61098 3.62962 3.78522 3.88272 3.97513 3.99040 4.04086 4.17072 4.24285 4.25717 4.29036 4.36246 4.39666 4.43381 4.49949 4.64082 4.70721 4.86958 4.93964 4.97127 5.02016 5.04808 5.08154 5.09638 5.23592 5.25241 5.34691 5.46709 6.19363 6.39309 6.67984 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.518 6.518 2 C -0.078 4.078 3 Si 0.696 3.304 4 C -0.072 4.072 5 C -0.151 4.151 6 C -0.068 4.068 7 C -0.195 4.195 8 C 0.142 3.858 9 O -0.299 6.299 10 C 0.061 3.939 11 C -0.087 4.087 12 H 0.086 0.914 13 C -0.111 4.111 14 C -0.152 4.152 15 C 0.103 3.897 16 H 0.054 0.946 17 O -0.569 6.569 18 C -0.111 4.111 19 C -0.109 4.109 20 C -0.049 4.049 21 Cl -0.044 7.044 22 H 0.374 0.626 23 H 0.121 0.879 24 H -0.258 1.258 25 H -0.254 1.254 26 H 0.138 0.862 27 H 0.136 0.864 28 H 0.138 0.862 29 H 0.065 0.935 30 H 0.067 0.933 31 H 0.075 0.925 32 H 0.063 0.937 33 H 0.066 0.934 34 H 0.072 0.928 35 H 0.379 0.621 36 H 0.073 0.927 37 H 0.072 0.928 38 H 0.069 0.931 39 H 0.074 0.926 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.469 1.887 -3.838 4.939 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.324 6.324 2 C -0.188 4.188 3 Si 0.597 3.403 4 C -0.073 4.073 5 C -0.169 4.169 6 C -0.087 4.087 7 C -0.214 4.214 8 C 0.095 3.905 9 O -0.212 6.212 10 C -0.014 4.014 11 C -0.106 4.106 12 H 0.105 0.895 13 C -0.149 4.149 14 C -0.190 4.190 15 C 0.044 3.956 16 H 0.072 0.928 17 O -0.375 6.375 18 C -0.149 4.149 19 C -0.147 4.147 20 C -0.076 4.076 21 Cl -0.015 7.015 22 H 0.222 0.778 23 H 0.139 0.861 24 H -0.183 1.183 25 H -0.179 1.179 26 H 0.155 0.845 27 H 0.154 0.846 28 H 0.156 0.844 29 H 0.084 0.916 30 H 0.085 0.915 31 H 0.094 0.906 32 H 0.082 0.918 33 H 0.085 0.915 34 H 0.091 0.909 35 H 0.226 0.774 36 H 0.092 0.908 37 H 0.091 0.909 38 H 0.087 0.913 39 H 0.093 0.907 Dipole moment (debyes) X Y Z Total from point charges 2.865 2.201 -3.037 4.719 hybrid contribution -1.655 -0.263 -0.694 1.813 sum 1.210 1.938 -3.731 4.375 Atomic orbital electron populations 1.86676 1.16907 1.79866 1.48945 1.25117 0.84554 1.11217 0.97900 0.94799 0.91487 0.73805 0.80224 1.20042 0.98773 0.91344 0.97166 1.21050 1.01914 1.00334 0.93648 1.21015 0.96477 0.93586 0.97579 1.21300 1.05792 0.95222 0.99071 1.18686 0.95449 0.83348 0.93020 1.86164 1.78636 1.15985 1.40406 1.22985 0.99008 0.93611 0.85758 1.21228 0.97568 0.91595 1.00162 0.89535 1.21514 0.95237 0.95227 1.02916 1.22278 1.01195 0.95949 0.99573 1.21845 0.96599 0.80660 0.96480 0.92763 1.86515 1.32232 1.21645 1.97120 1.21435 0.94898 0.95005 1.03543 1.21475 1.01271 0.94673 0.97279 1.20035 1.05708 0.91261 0.90610 1.98389 1.84165 1.73641 1.45264 0.77822 0.86092 1.18270 1.17922 0.84485 0.84641 0.84413 0.91635 0.91478 0.90601 0.91819 0.91515 0.90900 0.77360 0.90802 0.90896 0.91274 0.90723 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.86 12.83 -35.23 -0.45 -1.31 16 2 C -0.08 -0.03 2.09 36.01 0.08 0.04 16 3 Si 0.70 -0.83 30.24 -169.99 -5.14 -5.97 16 4 C -0.07 -0.05 5.26 -104.61 -0.55 -0.60 16 5 C -0.15 0.12 8.66 -39.56 -0.34 -0.22 16 6 C -0.07 0.09 10.04 -39.60 -0.40 -0.31 16 7 C -0.19 0.11 9.04 -39.44 -0.36 -0.25 16 8 C 0.14 0.21 6.68 -39.20 -0.26 -0.05 16 9 O -0.30 -0.44 9.13 -19.52 -0.18 -0.61 16 10 C 0.06 -0.08 4.12 37.16 0.15 0.07 16 11 C -0.09 0.12 2.43 -90.62 -0.22 -0.10 16 12 H 0.09 -0.04 8.14 -51.93 -0.42 -0.46 16 13 C -0.11 0.09 5.10 -26.73 -0.14 -0.05 16 14 C -0.15 0.10 5.55 -26.73 -0.15 -0.05 16 15 C 0.10 -0.03 3.47 -26.73 -0.09 -0.12 16 16 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 17 O -0.57 -0.63 13.32 -35.23 -0.47 -1.10 16 18 C -0.11 0.06 5.57 -26.73 -0.15 -0.09 16 19 C -0.11 0.24 5.20 -26.73 -0.14 0.10 16 20 C -0.05 -0.11 6.33 -39.36 -0.25 -0.36 16 21 Cl -0.04 -0.15 27.14 -51.86 -1.41 -1.56 16 22 H 0.37 -0.53 8.70 45.56 0.40 -0.14 16 23 H 0.12 0.07 7.41 -51.93 -0.38 -0.31 16 24 H -0.26 0.00 6.68 56.52 0.38 0.38 16 25 H -0.25 -0.54 7.11 56.52 0.40 -0.14 16 26 H 0.14 -0.32 4.85 -52.48 -0.25 -0.58 16 27 H 0.14 -0.50 8.06 -52.49 -0.42 -0.92 16 28 H 0.14 -0.36 6.30 -52.48 -0.33 -0.69 16 29 H 0.07 -0.15 7.66 -51.93 -0.40 -0.55 16 30 H 0.07 -0.17 7.66 -51.93 -0.40 -0.56 16 31 H 0.08 0.05 7.82 -51.93 -0.41 -0.36 16 32 H 0.06 -0.07 8.14 -51.93 -0.42 -0.50 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 35 H 0.38 -1.01 9.08 45.56 0.41 -0.60 16 36 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 38 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 LS Contribution 326.80 15.07 4.92 4.92 Total: 0.00 -6.15 326.80 -10.35 -16.50 By element: Atomic # 1 Polarization: -4.08 SS G_CDS: -4.81 Total: -8.90 kcal Atomic # 6 Polarization: 0.84 SS G_CDS: -2.81 Total: -1.98 kcal Atomic # 8 Polarization: -1.92 SS G_CDS: -1.10 Total: -3.02 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.14 Total: -5.97 kcal Atomic # 17 Polarization: -0.15 SS G_CDS: -1.41 Total: -1.56 kcal Total LS contribution 4.92 Total: 4.92 kcal Total: -6.15 -10.35 -16.50 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10544594_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.138 kcal (2) G-P(sol) polarization free energy of solvation -6.153 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.290 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.349 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.502 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.639 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds