Wall clock time and date at job start Mon Mar 8 2021 08:43:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86305 * 109.46672 * 2 1 4 4 C 1.50702 * 109.46966 * 240.00348 * 2 1 3 5 5 C 1.38239 * 119.97946 * 104.99769 * 4 2 1 6 6 C 1.38285 * 120.11971 * 179.97438 * 5 4 2 7 7 C 1.38153 * 120.07157 * 359.97438 * 6 5 4 8 8 C 1.38701 * 119.95853 * 0.02562 * 7 6 5 9 9 O 1.35929 * 120.05652 * 179.97438 * 8 7 6 10 10 C 1.42899 * 117.00083 * 359.97438 * 9 8 7 11 11 C 1.53000 * 109.46879 * 179.97438 * 10 9 8 12 12 H 1.09002 * 109.47538 * 305.00265 * 11 10 9 13 13 C 1.52999 * 109.47235 * 65.00623 * 11 10 9 14 14 C 1.53000 * 109.47235 * 179.97438 * 13 11 10 15 15 C 1.53003 * 109.46676 * 299.99481 * 14 13 11 16 16 H 1.08997 * 109.47332 * 299.99857 * 15 14 13 17 17 O 1.42903 * 109.46719 * 180.02562 * 15 14 13 18 18 C 1.53001 * 109.47229 * 60.00299 * 15 14 13 19 19 C 1.52995 * 109.46845 * 299.99948 * 18 15 14 20 20 C 1.38255 * 119.97429 * 285.01755 * 4 2 1 21 21 Cl 1.73604 * 120.04140 * 359.97438 * 20 4 2 22 22 H 0.96704 * 114.00504 * 60.00074 * 1 2 3 23 23 H 1.08993 * 109.47566 * 119.99640 * 2 1 3 24 24 H 1.48503 * 109.99942 * 298.67754 * 3 2 1 25 25 H 1.48491 * 110.00216 * 60.00428 * 3 2 1 26 26 H 1.08005 * 119.94398 * 359.97438 * 5 4 2 27 27 H 1.08001 * 119.96311 * 179.72594 * 6 5 4 28 28 H 1.08003 * 120.01779 * 179.97438 * 7 6 5 29 29 H 1.08999 * 109.47445 * 299.99977 * 10 9 8 30 30 H 1.09002 * 109.46759 * 60.00383 * 10 9 8 31 31 H 1.09002 * 109.46550 * 299.99584 * 13 11 10 32 32 H 1.09002 * 109.47150 * 59.99404 * 13 11 10 33 33 H 1.09005 * 109.47072 * 179.97438 * 14 13 11 34 34 H 1.08997 * 109.47124 * 59.99465 * 14 13 11 35 35 H 0.96697 * 114.00460 * 59.99703 * 17 15 14 36 36 H 1.08993 * 109.46971 * 179.97438 * 18 15 14 37 37 H 1.09002 * 109.46972 * 59.99846 * 18 15 14 38 38 H 1.09002 * 109.47251 * 299.99726 * 19 18 15 39 39 H 1.09005 * 109.46869 * 179.97438 * 19 18 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0498 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.4536 0.0174 -2.2834 6 6 2.9159 -0.6315 -3.4137 7 6 2.8573 -2.0094 -3.4935 8 6 2.3337 -2.7427 -2.4390 9 8 2.2747 -4.0985 -2.5156 10 6 2.7691 -4.7029 -3.7124 11 6 2.6215 -6.2226 -3.6149 12 1 3.1167 -6.5786 -2.7115 13 6 1.1368 -6.5883 -3.5606 14 6 0.9891 -8.1081 -3.4637 15 6 1.6308 -8.7618 -4.6892 16 1 1.1354 -8.4055 -5.5924 17 8 1.4923 -10.1813 -4.5991 18 6 3.1155 -8.3962 -4.7437 19 6 3.2631 -6.8764 -4.8404 20 6 1.8689 -2.0894 -1.3058 21 17 1.2130 -3.0033 0.0165 22 1 -0.3934 0.4417 -0.7651 23 1 1.7923 -0.5137 0.8899 24 1 1.5877 2.4586 -1.2243 25 1 1.5614 2.4679 1.2085 26 1 2.5009 1.0947 -2.2231 27 1 3.3194 -0.0601 -4.2366 28 1 3.2181 -2.5153 -4.3769 29 1 2.2000 -4.3362 -4.5666 30 1 3.8212 -4.4479 -3.8402 31 1 0.6796 -6.1221 -2.6878 32 1 0.6416 -6.2322 -4.4640 33 1 -0.0686 -8.3686 -3.4245 34 1 1.4845 -8.4644 -2.5606 35 1 0.5752 -10.4854 -4.5608 36 1 3.5726 -8.8623 -5.6164 37 1 3.6108 -8.7526 -3.8405 38 1 2.7678 -6.5200 -5.7436 39 1 4.3209 -6.6159 -4.8787 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_10544594_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:43:26 Heat of formation + Delta-G solvation = -109.096747 kcal Electronic energy + Delta-G solvation = -22213.779644 eV Core-core repulsion = 18727.564110 eV Total energy + Delta-G solvation = -3486.215535 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.101 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -41.47163 -40.20339 -39.12522 -37.50540 -37.35264 -36.65138 -32.47422 -32.28116 -31.83598 -30.68389 -27.32385 -26.25758 -23.96158 -23.61701 -22.93365 -21.77350 -20.89138 -19.29339 -18.23776 -18.11046 -17.55633 -17.26788 -17.09704 -16.40909 -16.19431 -15.61845 -15.50580 -15.28164 -15.12378 -14.85555 -14.47119 -14.19234 -13.96737 -13.72505 -13.37193 -13.23809 -13.14851 -12.77358 -12.69113 -12.47811 -12.26543 -12.15527 -11.95074 -11.75713 -11.65110 -11.58300 -11.51886 -11.10788 -10.74211 -10.65429 -9.91198 -9.26768 -4.91281 -0.00039 0.20956 1.19916 1.25384 1.58124 1.92590 2.08635 2.48304 3.20908 3.37089 3.53632 3.62673 3.67988 3.72760 3.89772 3.98975 4.06236 4.08483 4.13970 4.26410 4.33401 4.34140 4.35229 4.44725 4.46466 4.51684 4.58736 4.70850 4.80271 4.95880 5.01011 5.04862 5.07306 5.12539 5.14610 5.17523 5.30759 5.31856 5.41464 5.58149 6.26220 6.48261 6.83042 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.095 4.095 3 Si 0.785 3.215 4 C -0.077 4.077 5 C -0.151 4.151 6 C -0.063 4.063 7 C -0.194 4.194 8 C 0.127 3.873 9 O -0.319 6.319 10 C 0.059 3.941 11 C -0.083 4.083 12 H 0.071 0.929 13 C -0.108 4.108 14 C -0.148 4.148 15 C 0.102 3.898 16 H 0.065 0.935 17 O -0.591 6.591 18 C -0.114 4.114 19 C -0.101 4.101 20 C -0.075 4.075 21 Cl -0.069 7.069 22 H 0.386 0.614 23 H 0.111 0.889 24 H -0.263 1.263 25 H -0.304 1.304 26 H 0.156 0.844 27 H 0.167 0.833 28 H 0.161 0.839 29 H 0.079 0.921 30 H 0.081 0.919 31 H 0.057 0.943 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.057 0.943 35 H 0.393 0.607 36 H 0.072 0.928 37 H 0.059 0.941 38 H 0.082 0.918 39 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.294 3.043 -5.864 7.382 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.202 4.202 3 Si 0.688 3.312 4 C -0.078 4.078 5 C -0.169 4.169 6 C -0.081 4.081 7 C -0.213 4.213 8 C 0.080 3.920 9 O -0.233 6.233 10 C -0.016 4.016 11 C -0.102 4.102 12 H 0.089 0.911 13 C -0.145 4.145 14 C -0.186 4.186 15 C 0.043 3.957 16 H 0.083 0.917 17 O -0.399 6.399 18 C -0.152 4.152 19 C -0.139 4.139 20 C -0.102 4.102 21 Cl -0.041 7.041 22 H 0.235 0.765 23 H 0.129 0.871 24 H -0.189 1.189 25 H -0.232 1.232 26 H 0.173 0.827 27 H 0.184 0.816 28 H 0.178 0.822 29 H 0.097 0.903 30 H 0.100 0.900 31 H 0.076 0.924 32 H 0.091 0.909 33 H 0.090 0.910 34 H 0.076 0.924 35 H 0.242 0.758 36 H 0.091 0.909 37 H 0.078 0.922 38 H 0.100 0.900 39 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 3.684 3.327 -5.084 7.105 hybrid contribution -1.939 -0.649 -0.055 2.046 sum 1.745 2.678 -5.139 6.052 Atomic orbital electron populations 1.86636 1.17873 1.80480 1.49850 1.25444 0.84064 1.13008 0.97695 0.93782 0.89986 0.70396 0.76990 1.20129 0.99111 0.90875 0.97733 1.21289 1.01218 1.01163 0.93245 1.21419 0.95184 0.93474 0.97993 1.21603 1.05002 0.95693 0.99019 1.18900 0.96037 0.83563 0.93451 1.86144 1.79047 1.16285 1.41789 1.23130 1.00021 0.93096 0.85335 1.21176 0.96930 0.92039 1.00049 0.91057 1.21466 0.95788 0.94845 1.02449 1.22223 1.01315 0.96086 0.98935 1.21921 0.96879 0.80128 0.96763 0.91740 1.86478 1.33798 1.22483 1.97173 1.21472 0.94650 0.96259 1.02772 1.21428 1.02053 0.93236 0.97152 1.20306 1.07383 0.91922 0.90609 1.98367 1.84716 1.74345 1.46633 0.76545 0.87143 1.18878 1.23183 0.82681 0.81588 0.82198 0.90273 0.90043 0.92428 0.90905 0.91023 0.92414 0.75781 0.90946 0.92244 0.89968 0.89585 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.47 12.83 -148.98 -1.91 -4.38 16 2 C -0.09 -0.15 2.09 71.24 0.15 0.00 16 3 Si 0.79 -2.11 30.24 68.60 2.07 -0.03 16 4 C -0.08 -0.13 5.26 -19.86 -0.10 -0.23 16 5 C -0.15 0.48 8.66 22.28 0.19 0.67 16 6 C -0.06 0.32 10.04 22.26 0.22 0.54 16 7 C -0.19 0.54 9.04 22.36 0.20 0.74 16 8 C 0.13 0.40 6.68 22.52 0.15 0.55 16 9 O -0.32 -1.14 9.13 -92.75 -0.85 -1.99 16 10 C 0.06 -0.20 4.12 71.98 0.30 0.10 16 11 C -0.08 0.21 2.43 -10.79 -0.03 0.18 16 12 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 13 C -0.11 0.09 5.10 30.59 0.16 0.25 16 14 C -0.15 0.06 5.55 30.60 0.17 0.23 16 15 C 0.10 -0.03 3.47 30.60 0.11 0.08 16 16 H 0.06 -0.15 8.14 -2.39 -0.02 -0.17 16 17 O -0.59 -1.61 13.32 -148.98 -1.98 -3.59 16 18 C -0.11 0.10 5.57 30.59 0.17 0.27 16 19 C -0.10 0.52 5.20 30.59 0.16 0.68 16 20 C -0.07 -0.42 6.33 22.41 0.14 -0.28 16 21 Cl -0.07 -0.64 27.14 -2.72 -0.07 -0.71 16 22 H 0.39 -0.80 8.70 -74.05 -0.64 -1.44 16 23 H 0.11 0.34 7.41 -2.39 -0.02 0.32 16 24 H -0.26 0.47 6.68 99.48 0.66 1.14 16 25 H -0.30 -1.66 7.11 99.48 0.71 -0.95 16 26 H 0.16 -1.11 4.85 -2.91 -0.01 -1.12 16 27 H 0.17 -1.87 8.06 -2.91 -0.02 -1.89 16 28 H 0.16 -1.26 6.30 -2.91 -0.02 -1.27 16 29 H 0.08 -0.49 7.66 -2.39 -0.02 -0.51 16 30 H 0.08 -0.52 7.66 -2.39 -0.02 -0.54 16 31 H 0.06 0.17 7.82 -2.39 -0.02 0.15 16 32 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 33 H 0.07 -0.12 8.14 -2.38 -0.02 -0.14 16 34 H 0.06 0.15 8.14 -2.39 -0.02 0.13 16 35 H 0.39 -1.92 9.08 -74.06 -0.67 -2.59 16 36 H 0.07 -0.04 8.14 -2.39 -0.02 -0.06 16 37 H 0.06 0.10 8.14 -2.39 -0.02 0.08 16 38 H 0.08 -0.59 8.14 -2.39 -0.02 -0.61 16 39 H 0.09 -0.61 8.14 -2.38 -0.02 -0.63 16 Total: 0.00 -16.23 326.80 -1.00 -17.23 By element: Atomic # 1 Polarization: -10.04 SS G_CDS: -0.25 Total: -10.29 kcal Atomic # 6 Polarization: 1.78 SS G_CDS: 1.99 Total: 3.77 kcal Atomic # 8 Polarization: -5.22 SS G_CDS: -4.74 Total: -9.96 kcal Atomic # 14 Polarization: -2.11 SS G_CDS: 2.07 Total: -0.03 kcal Atomic # 17 Polarization: -0.64 SS G_CDS: -0.07 Total: -0.71 kcal Total: -16.23 -1.00 -17.23 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10544594_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.866 kcal (2) G-P(sol) polarization free energy of solvation -16.228 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.093 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.097 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds