Wall clock time and date at job start Mon Mar 8 2021 09:03:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.42897 * 113.99963 * 2 1 4 4 C 1.53002 * 112.84910 * 65.90319 * 3 2 1 5 5 F 1.39897 * 109.46941 * 283.57976 * 4 3 2 6 6 F 1.39894 * 109.47348 * 43.58171 * 4 3 2 7 7 F 1.39907 * 109.47076 * 163.58106 * 4 3 2 8 8 C 1.53780 * 113.61749 * 294.70333 * 3 2 1 9 9 C 1.53785 * 87.08096 * 270.88441 * 8 3 2 10 10 H 1.09003 * 113.61338 * 220.01555 * 9 8 3 11 11 C 1.52998 * 113.61370 * 89.19841 * 9 8 3 12 12 O 1.42897 * 109.47066 * 176.52664 * 11 9 8 13 13 C 1.35932 * 117.00212 * 179.97438 * 12 11 9 14 14 C 1.38814 * 120.06294 * 179.72677 * 13 12 11 15 15 Cl 1.73596 * 120.03612 * 359.97438 * 14 13 12 16 16 C 1.38255 * 119.92191 * 179.70011 * 14 13 12 17 17 C 1.50701 * 119.97836 * 180.29902 * 16 14 13 18 18 O 1.42895 * 109.47087 * 285.29980 * 17 16 14 19 19 Si 1.86299 * 109.47202 * 165.30024 * 17 16 14 20 20 C 1.38248 * 120.04200 * 0.59506 * 16 14 13 21 21 C 1.38282 * 120.12012 * 359.68251 * 20 16 14 22 22 C 1.38150 * 120.07550 * 0.02562 * 21 20 16 23 23 C 1.53775 * 87.17389 * 334.60938 * 9 8 3 24 24 H 1.09000 * 109.47258 * 296.83471 * 1 2 3 25 25 H 1.09001 * 109.47387 * 56.83483 * 1 2 3 26 26 H 1.08998 * 109.47248 * 176.83375 * 1 2 3 27 27 H 1.08993 * 113.61729 * 156.33861 * 8 3 2 28 28 H 1.09002 * 113.69080 * 25.44008 * 8 3 2 29 29 H 1.08997 * 109.47390 * 296.52985 * 11 9 8 30 30 H 1.09004 * 109.47149 * 56.52696 * 11 9 8 31 31 H 1.08998 * 109.46681 * 45.29979 * 17 16 14 32 32 H 0.96705 * 113.99982 * 299.99853 * 18 17 16 33 33 H 1.48492 * 110.00084 * 180.02562 * 19 17 16 34 34 H 1.48499 * 109.99923 * 301.32010 * 19 17 16 35 35 H 1.08002 * 119.93791 * 179.69422 * 20 16 14 36 36 H 1.07997 * 119.95777 * 180.02562 * 21 20 16 37 37 H 1.07995 * 120.02179 * 180.02562 * 22 21 20 38 38 H 1.08994 * 113.61935 * 139.94183 * 23 9 8 39 39 H 1.09002 * 113.61220 * 270.84594 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0101 1.3054 0.0000 4 6 1.7259 2.0823 1.2871 5 9 0.4091 2.5544 1.2657 6 9 1.9010 1.2388 2.3893 7 9 2.6077 3.1643 1.3831 8 6 1.7228 2.1078 -1.2800 9 6 2.9995 1.4812 -1.8653 10 1 3.5970 2.1771 -2.4542 11 6 2.7565 0.1520 -2.5829 12 8 3.9802 -0.3089 -3.1591 13 6 3.9381 -1.4862 -3.8373 14 6 5.0890 -1.9904 -4.4273 15 17 6.5843 -1.1176 -4.3006 16 6 5.0442 -3.1911 -5.1112 17 6 6.2944 -3.7429 -5.7465 18 8 6.5954 -3.0000 -6.9294 19 14 6.0283 -5.5331 -6.1884 20 6 3.8520 -3.8828 -5.2178 21 6 2.7032 -3.3794 -4.6356 22 6 2.7436 -2.1830 -3.9460 23 6 3.4920 1.3186 -0.4176 24 1 -0.3634 0.4639 0.9170 25 1 -0.3634 0.5622 -0.8602 26 1 -0.3634 -1.0261 -0.0568 27 1 1.7893 3.1870 -1.1431 28 1 0.8113 1.8016 -1.7935 29 1 2.3910 -0.5853 -1.8681 30 1 2.0153 0.2939 -3.3694 31 1 7.1247 -3.6614 -5.0450 32 1 5.8987 -3.0279 -7.5994 33 1 7.2542 -6.0892 -6.8152 34 1 5.6831 -6.3108 -4.9714 35 1 3.8179 -4.8182 -5.7566 36 1 1.7734 -3.9221 -4.7201 37 1 1.8460 -1.7908 -3.4913 38 1 4.0065 0.3754 -0.2347 39 1 4.0430 2.1819 -0.0444 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10544594_17321602.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:03:51 Heat of formation + Delta-G solvation = -204.234676 kcal Electronic energy + Delta-G solvation = -30003.629812 eV Core-core repulsion = 25104.926860 eV Total energy + Delta-G solvation = -4898.702952 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.073 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -51.20203 -48.74802 -48.63614 -41.89289 -41.08294 -39.18595 -37.46348 -37.23854 -37.02616 -32.47607 -31.75010 -30.21925 -28.39087 -27.61176 -26.94976 -26.67424 -23.84175 -23.59477 -22.36965 -20.70286 -19.88232 -19.50859 -19.28563 -19.19882 -17.97957 -17.57861 -17.43839 -17.22351 -16.97232 -16.62655 -16.21097 -15.93293 -15.67073 -15.54149 -15.52523 -15.40687 -15.14149 -15.06450 -14.84343 -14.80313 -14.51219 -14.31920 -14.18072 -14.09626 -13.54135 -13.36019 -13.23000 -13.04665 -12.80998 -12.56543 -12.44458 -12.22475 -12.06087 -11.97253 -11.90667 -11.78990 -11.48987 -10.94344 -10.47917 -9.92363 -9.27197 -5.06488 -0.03406 0.16756 1.22539 1.28240 1.51032 1.63397 1.83396 1.93347 1.99963 2.43413 2.48712 2.58111 2.79951 3.17377 3.28439 3.34929 3.44711 3.54902 3.56263 3.77839 3.88510 3.96531 3.98116 4.07002 4.09375 4.18285 4.24307 4.27906 4.30434 4.41765 4.42616 4.50751 4.57835 4.62560 4.67979 4.83618 4.93912 5.05200 5.22869 5.45449 5.54127 6.17129 6.57285 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.333 6.333 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.142 4.142 9 C -0.098 4.098 10 H 0.107 0.893 11 C 0.068 3.932 12 O -0.299 6.299 13 C 0.143 3.857 14 C -0.049 4.049 15 Cl -0.044 7.044 16 C -0.076 4.076 17 C -0.071 4.071 18 O -0.529 6.529 19 Si 0.690 3.310 20 C -0.143 4.143 21 C -0.069 4.069 22 C -0.194 4.194 23 C -0.111 4.111 24 H 0.054 0.946 25 H 0.055 0.945 26 H 0.102 0.898 27 H 0.113 0.887 28 H 0.095 0.905 29 H 0.086 0.914 30 H 0.069 0.931 31 H 0.117 0.883 32 H 0.378 0.622 33 H -0.252 1.252 34 H -0.255 1.255 35 H 0.139 0.861 36 H 0.137 0.863 37 H 0.138 0.862 38 H 0.099 0.901 39 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.810 -1.178 -3.199 6.736 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.250 6.250 3 C -0.004 4.004 4 C 0.382 3.618 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.179 4.179 9 C -0.117 4.117 10 H 0.126 0.874 11 C -0.007 4.007 12 O -0.212 6.212 13 C 0.096 3.904 14 C -0.077 4.077 15 Cl -0.015 7.015 16 C -0.077 4.077 17 C -0.181 4.181 18 O -0.334 6.334 19 Si 0.590 3.410 20 C -0.160 4.160 21 C -0.087 4.087 22 C -0.213 4.213 23 C -0.148 4.148 24 H 0.073 0.927 25 H 0.074 0.926 26 H 0.120 0.880 27 H 0.132 0.868 28 H 0.113 0.887 29 H 0.104 0.896 30 H 0.087 0.913 31 H 0.134 0.866 32 H 0.225 0.775 33 H -0.176 1.176 34 H -0.179 1.179 35 H 0.156 0.844 36 H 0.155 0.845 37 H 0.156 0.844 38 H 0.118 0.882 39 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -4.600 -1.824 -2.651 5.614 hybrid contribution -0.374 0.881 0.965 1.359 sum -4.974 -0.944 -1.686 5.336 Atomic orbital electron populations 1.23151 0.79498 1.04362 1.01644 1.88086 1.21124 1.21975 1.93847 1.24100 1.00086 0.86264 0.89946 1.21158 0.74314 0.78745 0.87535 1.93192 1.36932 1.89368 1.96822 1.93221 1.94953 1.70682 1.56655 1.93186 1.68864 1.56953 1.96568 1.23586 0.99504 1.01211 0.93625 1.22060 0.97531 0.96390 0.95674 0.87433 1.22807 0.85077 0.95701 0.97083 1.86123 1.34870 1.34312 1.65915 1.18653 0.92693 0.86396 0.92646 1.20028 0.87382 0.95545 1.04695 1.98389 1.30803 1.75330 1.96928 1.20136 0.96645 0.93167 0.97734 1.25157 0.96227 1.07338 0.89403 1.86580 1.46060 1.74279 1.26438 0.94920 0.86238 0.73720 0.86075 1.20857 0.91806 1.00464 1.02915 1.21020 0.98569 0.94477 0.94613 1.21288 0.96873 0.97858 1.05250 1.23291 0.90780 1.05884 0.94870 0.92745 0.92609 0.87956 0.86842 0.88680 0.89605 0.91309 0.86566 0.77534 1.17632 1.17941 0.84423 0.84506 0.84403 0.88217 0.86479 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.02 16 2 O -0.33 0.18 8.34 -35.23 -0.29 -0.11 16 3 C 0.04 -0.04 0.85 -89.71 -0.08 -0.11 16 4 C 0.44 0.34 2.51 37.16 0.09 0.43 16 5 F -0.18 -0.17 15.38 2.25 0.03 -0.14 16 6 F -0.17 -0.46 17.09 2.25 0.04 -0.42 16 7 F -0.17 -0.18 15.84 2.25 0.04 -0.14 16 8 C -0.14 0.42 6.51 -25.92 -0.17 0.25 16 9 C -0.10 0.22 4.19 -89.81 -0.38 -0.16 16 10 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 11 C 0.07 -0.10 4.34 37.16 0.16 0.06 16 12 O -0.30 -0.40 9.60 -19.52 -0.19 -0.58 16 13 C 0.14 0.21 6.68 -39.19 -0.26 -0.06 16 14 C -0.05 -0.11 6.33 -39.36 -0.25 -0.36 16 15 Cl -0.04 -0.16 27.13 -51.86 -1.41 -1.56 16 16 C -0.08 -0.05 5.26 -104.61 -0.55 -0.60 16 17 C -0.07 -0.03 2.09 36.01 0.08 0.05 16 18 O -0.53 -0.32 12.81 -35.23 -0.45 -0.77 16 19 Si 0.69 -0.83 29.91 -169.99 -5.09 -5.92 16 20 C -0.14 0.20 8.66 -39.56 -0.34 -0.14 16 21 C -0.07 0.12 10.04 -39.60 -0.40 -0.28 16 22 C -0.19 0.14 9.04 -39.44 -0.36 -0.21 16 23 C -0.11 0.15 6.91 -25.83 -0.18 -0.03 16 24 H 0.05 -0.08 6.60 -51.93 -0.34 -0.42 16 25 H 0.06 -0.22 6.60 -51.93 -0.34 -0.56 16 26 H 0.10 -0.39 8.14 -51.93 -0.42 -0.81 16 27 H 0.11 -0.41 8.06 -51.93 -0.42 -0.83 16 28 H 0.09 -0.39 6.65 -51.93 -0.35 -0.73 16 29 H 0.09 -0.12 5.61 -51.93 -0.29 -0.41 16 30 H 0.07 -0.20 7.66 -51.93 -0.40 -0.59 16 31 H 0.12 0.19 7.42 -51.93 -0.39 -0.19 16 32 H 0.38 -1.35 8.70 45.56 0.40 -0.95 16 33 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 34 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 35 H 0.14 -0.55 5.12 -52.49 -0.27 -0.82 16 36 H 0.14 -0.59 8.06 -52.49 -0.42 -1.01 16 37 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 38 H 0.10 -0.05 8.10 -51.93 -0.42 -0.47 16 39 H 0.12 -0.24 7.02 -51.93 -0.36 -0.61 16 LS Contribution 342.23 15.07 5.16 5.16 Total: 0.00 -6.73 342.23 -7.72 -14.45 By element: Atomic # 1 Polarization: -5.85 SS G_CDS: -3.98 Total: -9.83 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: -1.58 Total: -0.13 kcal Atomic # 8 Polarization: -0.53 SS G_CDS: -0.93 Total: -1.46 kcal Atomic # 9 Polarization: -0.81 SS G_CDS: 0.11 Total: -0.70 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.09 Total: -5.92 kcal Atomic # 17 Polarization: -0.16 SS G_CDS: -1.41 Total: -1.56 kcal Total LS contribution 5.16 Total: 5.16 kcal Total: -6.73 -7.72 -14.45 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10544594_17321602.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -189.788 kcal (2) G-P(sol) polarization free energy of solvation -6.727 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -196.515 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.720 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.447 kcal (6) G-S(sol) free energy of system = (1) + (5) -204.235 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds