Wall clock time and date at job start Mon Mar 8 2021 07:27:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 C 1.52997 * 109.47655 * 2 1 4 4 C 1.52995 * 109.46994 * 239.99552 * 2 1 3 5 5 Si 1.86299 * 109.46921 * 119.99936 * 2 1 3 6 6 C 1.86297 * 109.47314 * 299.99766 * 5 2 1 7 7 C 1.86303 * 109.47163 * 179.97438 * 5 2 1 8 8 O 1.63104 * 109.46989 * 59.99970 * 5 2 1 9 9 C 1.42899 * 113.99972 * 180.02562 * 8 5 2 10 10 C 1.53000 * 109.47405 * 179.97438 * 9 8 5 11 11 O 1.42903 * 109.46726 * 64.99720 * 10 9 8 12 12 C 1.35925 * 116.99722 * 180.02562 * 11 10 9 13 13 C 1.38677 * 120.05563 * 0.02562 * 12 11 10 14 14 C 1.38194 * 119.94757 * 179.97438 * 13 12 11 15 15 C 1.38235 * 120.07709 * 359.96930 * 14 13 12 16 16 C 1.38291 * 120.11156 * 0.02562 * 15 14 13 17 17 C 1.50704 * 119.97527 * 179.97438 * 16 15 14 18 18 O 1.42902 * 109.47306 * 255.00622 * 17 16 15 19 19 Si 1.86306 * 109.46824 * 15.00365 * 17 16 15 20 20 H 1.48499 * 109.46799 * 179.97438 * 19 17 16 21 21 H 1.48502 * 109.47098 * 299.99538 * 19 17 16 22 22 H 1.48494 * 109.47197 * 59.99897 * 19 17 16 23 23 C 1.38191 * 120.05286 * 359.79052 * 16 15 14 24 24 Br 1.89100 * 120.04052 * 180.25003 * 23 16 15 25 25 H 1.08999 * 109.47189 * 300.00592 * 1 2 3 26 26 H 1.08998 * 109.46838 * 59.99525 * 1 2 3 27 27 H 1.08991 * 109.47403 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47445 * 179.97438 * 3 2 1 29 29 H 1.09000 * 109.46663 * 300.00314 * 3 2 1 30 30 H 1.09002 * 109.47015 * 59.99900 * 3 2 1 31 31 H 1.08999 * 109.47775 * 300.00469 * 4 2 1 32 32 H 1.09008 * 109.47049 * 60.00557 * 4 2 1 33 33 H 1.09002 * 109.47582 * 180.02562 * 4 2 1 34 34 H 1.08998 * 109.47381 * 179.97438 * 6 5 2 35 35 H 1.08999 * 109.47492 * 299.99982 * 6 5 2 36 36 H 1.09004 * 109.46818 * 60.00009 * 6 5 2 37 37 H 1.08998 * 109.46674 * 300.00064 * 7 5 2 38 38 H 1.08991 * 109.47013 * 60.00204 * 7 5 2 39 39 H 1.08998 * 109.47060 * 179.97438 * 7 5 2 40 40 H 1.09002 * 109.47445 * 59.99903 * 9 8 5 41 41 H 1.09002 * 109.47167 * 299.99822 * 9 8 5 42 42 H 1.09002 * 109.47398 * 184.99964 * 10 9 8 43 43 H 1.09001 * 109.47194 * 305.00145 * 10 9 8 44 44 H 1.07994 * 120.02801 * 359.97438 * 13 12 11 45 45 H 1.08005 * 119.95649 * 180.02562 * 14 13 12 46 46 H 1.07993 * 119.94653 * 180.02562 * 15 14 13 47 47 H 1.08995 * 109.47442 * 135.00111 * 17 16 15 48 48 H 0.96698 * 114.00034 * 180.02562 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0401 1.4424 0.0000 4 6 2.0399 -0.7213 -1.2491 5 14 2.1509 -0.8782 1.5212 6 6 1.5300 0.0000 3.0423 7 6 4.0140 -0.8789 1.5208 8 8 1.6072 -2.4160 1.5211 9 6 2.0283 -3.1814 2.6520 10 6 1.4625 -4.5991 2.5477 11 8 2.0309 -5.2564 1.4133 12 6 1.6305 -6.5334 1.1754 13 6 0.7096 -7.1406 2.0160 14 6 0.3038 -8.4388 1.7718 15 6 0.8142 -9.1324 0.6904 16 6 1.7325 -8.5297 -0.1496 17 6 2.2874 -9.2889 -1.3273 18 8 3.6275 -9.6958 -1.0431 19 14 1.2362 -10.7934 -1.6472 20 1 1.7826 -11.5412 -2.8081 21 1 1.2442 -11.6673 -0.4466 22 1 -0.1563 -10.3706 -1.9425 23 6 2.1390 -7.2304 0.0877 24 35 3.3895 -6.4041 -1.0653 25 1 -0.3633 0.5139 0.8899 26 1 -0.3633 0.5139 -0.8899 27 1 -0.3634 -1.0276 -0.0005 28 1 3.1301 1.4424 0.0005 29 1 1.6767 1.9562 -0.8900 30 1 1.6768 1.9563 0.8900 31 1 1.6766 -1.7490 -1.2492 32 1 1.6766 -0.2075 -2.1392 33 1 3.1300 -0.7218 -1.2490 34 1 1.8929 -0.5141 3.9323 35 1 1.8934 1.0277 3.0423 36 1 0.4400 0.0000 3.0422 37 1 4.3769 -1.3930 0.6309 38 1 4.3776 0.1485 1.5206 39 1 4.3772 -1.3924 2.4111 40 1 1.6635 -2.7112 3.5652 41 1 3.1172 -3.2253 2.6759 42 1 1.7088 -5.1561 3.4517 43 1 0.3794 -4.5506 2.4346 44 1 0.3100 -6.5993 2.8607 45 1 -0.4137 -8.9117 2.4261 46 1 0.4952 -10.1467 0.5013 47 1 2.2816 -8.6475 -2.2085 48 1 4.0485 -10.1906 -1.7594 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10910592_10902662.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:27:28 Heat of formation + Delta-G solvation = -138.594622 kcal Electronic energy + Delta-G solvation = -26614.060908 eV Core-core repulsion = 22839.029838 eV Total energy + Delta-G solvation = -3775.031069 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 390.082 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -41.32486 -39.31814 -37.86718 -37.15690 -36.81752 -33.42319 -32.20047 -30.89145 -29.65088 -29.32330 -29.08617 -27.84945 -27.36918 -26.89544 -24.22393 -23.49391 -21.84267 -20.40097 -19.07130 -18.47395 -18.12246 -17.56681 -17.33185 -16.55014 -16.09411 -15.97871 -15.75014 -15.60549 -15.25724 -14.85245 -14.77183 -14.66394 -14.42547 -14.06119 -14.03139 -13.76699 -13.56913 -13.44159 -13.40299 -13.24919 -12.98082 -12.91475 -12.89535 -12.51745 -12.39732 -12.21318 -12.10741 -11.99530 -11.82504 -11.71856 -11.67788 -11.60990 -11.54451 -11.31728 -10.84479 -10.38117 -10.28576 -10.06339 -9.78048 -9.16464 0.02893 0.27351 0.88805 1.09658 1.42307 1.43035 1.48920 1.73247 1.87071 2.04329 2.09099 2.42051 2.49448 3.34229 3.67304 3.79238 3.92549 3.94327 4.01578 4.07778 4.12615 4.13692 4.15087 4.20815 4.23555 4.47274 4.49783 4.56369 4.64339 4.68170 4.68560 4.73131 4.76212 4.82005 4.88078 5.00926 5.01753 5.12223 5.13335 5.16211 5.18510 5.32400 5.33461 5.35781 5.43448 5.51129 5.53001 5.56024 5.61468 6.28442 6.60640 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C -0.374 4.374 3 C -0.137 4.137 4 C -0.134 4.134 5 Si 1.286 2.714 6 C -0.512 4.512 7 C -0.511 4.511 8 O -0.617 6.617 9 C 0.087 3.913 10 C 0.054 3.946 11 O -0.288 6.288 12 C 0.160 3.840 13 C -0.203 4.203 14 C -0.057 4.057 15 C -0.160 4.160 16 C -0.009 4.009 17 C -0.090 4.090 18 O -0.534 6.534 19 Si 0.950 3.050 20 H -0.253 1.253 21 H -0.246 1.246 22 H -0.247 1.247 23 C -0.103 4.103 24 Br -0.026 7.026 25 H 0.053 0.947 26 H 0.053 0.947 27 H 0.059 0.941 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.055 0.945 31 H 0.061 0.939 32 H 0.052 0.948 33 H 0.054 0.946 34 H 0.066 0.934 35 H 0.074 0.926 36 H 0.072 0.928 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.066 0.934 40 H 0.078 0.922 41 H 0.069 0.931 42 H 0.078 0.922 43 H 0.077 0.923 44 H 0.139 0.861 45 H 0.136 0.864 46 H 0.132 0.868 47 H 0.082 0.918 48 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.813 -0.532 2.104 2.828 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.191 4.191 2 C -0.417 4.417 3 C -0.194 4.194 4 C -0.191 4.191 5 Si 1.417 2.583 6 C -0.614 4.614 7 C -0.612 4.612 8 O -0.576 6.576 9 C 0.012 3.988 10 C -0.021 4.021 11 O -0.201 6.201 12 C 0.112 3.888 13 C -0.222 4.222 14 C -0.076 4.076 15 C -0.178 4.178 16 C -0.012 4.012 17 C -0.200 4.200 18 O -0.339 6.339 19 Si 0.772 3.228 20 H -0.177 1.177 21 H -0.170 1.170 22 H -0.170 1.170 23 C -0.184 4.184 24 Br 0.060 6.940 25 H 0.072 0.928 26 H 0.072 0.928 27 H 0.078 0.922 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.074 0.926 31 H 0.080 0.920 32 H 0.071 0.929 33 H 0.073 0.927 34 H 0.085 0.915 35 H 0.094 0.906 36 H 0.091 0.909 37 H 0.093 0.907 38 H 0.092 0.908 39 H 0.085 0.915 40 H 0.096 0.904 41 H 0.087 0.913 42 H 0.096 0.904 43 H 0.095 0.905 44 H 0.156 0.844 45 H 0.154 0.846 46 H 0.150 0.850 47 H 0.100 0.900 48 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges -1.997 -0.684 1.826 2.791 hybrid contribution 0.199 0.440 0.194 0.520 sum -1.797 -0.244 2.020 2.715 Atomic orbital electron populations 1.21506 0.93867 1.01977 1.01720 1.25764 1.00621 1.02553 1.12778 1.21556 1.00788 0.94942 1.02091 1.21506 1.00629 1.00368 0.96609 0.76745 0.63152 0.53361 0.65016 1.27048 1.06993 1.09599 1.17713 1.27023 1.24981 1.04622 1.04616 1.85410 1.79059 1.45948 1.47206 1.22069 0.99464 0.89588 0.87724 1.23095 0.99256 0.92079 0.87659 1.86267 1.64114 1.22641 1.47038 1.18606 0.92839 0.84580 0.92812 1.21297 1.01545 0.97347 1.02049 1.21006 0.97343 0.93297 0.95922 1.20988 0.99789 1.00646 0.96415 1.18999 0.95207 0.91427 0.95530 1.24841 0.91005 1.06480 0.97720 1.86533 1.25290 1.76985 1.45141 0.85709 0.79294 0.77089 0.80750 1.17715 1.16955 1.17017 1.20898 1.03221 0.95765 0.98470 1.96701 1.55748 1.80160 1.61369 0.92771 0.92818 0.92172 0.92520 0.92511 0.92575 0.91979 0.92875 0.92722 0.91522 0.90643 0.90865 0.90704 0.90811 0.91514 0.90376 0.91309 0.90437 0.90475 0.84364 0.84603 0.85016 0.89988 0.77168 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.05 7.85 37.16 0.29 0.25 16 2 C -0.37 -0.05 0.53 -90.62 -0.05 -0.10 16 3 C -0.14 0.04 7.85 37.16 0.29 0.33 16 4 C -0.13 -0.13 7.85 37.15 0.29 0.16 16 5 Si 1.29 -1.07 8.45 -169.99 -1.44 -2.51 16 6 C -0.51 0.54 8.50 101.05 0.86 1.40 16 7 C -0.51 0.08 8.50 101.05 0.86 0.94 16 8 O -0.62 -0.34 8.52 -40.09 -0.34 -0.68 16 9 C 0.09 -0.11 5.50 37.16 0.20 0.10 16 10 C 0.05 -0.05 5.12 37.16 0.19 0.14 16 11 O -0.29 -0.72 9.44 -24.36 -0.23 -0.95 16 12 C 0.16 0.43 6.68 -39.20 -0.26 0.17 16 13 C -0.20 -0.10 9.04 -39.44 -0.36 -0.46 16 14 C -0.06 0.00 10.04 -39.60 -0.40 -0.40 16 15 C -0.16 -0.19 8.66 -39.56 -0.34 -0.53 16 16 C -0.01 -0.02 5.29 -104.62 -0.55 -0.58 16 17 C -0.09 -0.06 2.01 36.01 0.07 0.01 16 18 O -0.53 -0.46 12.69 -35.23 -0.45 -0.91 16 19 Si 0.95 -0.42 25.49 -169.99 -4.33 -4.75 16 20 H -0.25 0.10 7.11 56.52 0.40 0.51 16 21 H -0.25 -0.07 6.73 56.52 0.38 0.31 16 22 H -0.25 -0.04 7.11 56.52 0.40 0.36 16 23 C -0.10 -0.37 6.23 -39.38 -0.25 -0.62 16 24 Br -0.03 -0.09 31.44 -68.01 -2.14 -2.23 16 25 H 0.05 -0.02 7.79 -51.93 -0.40 -0.43 16 26 H 0.05 0.03 8.14 -51.93 -0.42 -0.39 16 27 H 0.06 0.04 7.97 -51.93 -0.41 -0.37 16 28 H 0.06 -0.05 7.79 -51.93 -0.40 -0.45 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.42 16 30 H 0.06 -0.06 7.79 -51.93 -0.40 -0.46 16 31 H 0.06 0.10 7.97 -51.93 -0.41 -0.31 16 32 H 0.05 0.06 8.14 -51.92 -0.42 -0.37 16 33 H 0.05 0.03 7.79 -51.93 -0.40 -0.38 16 34 H 0.07 -0.11 7.48 -51.93 -0.39 -0.50 16 35 H 0.07 -0.09 7.79 -51.93 -0.40 -0.49 16 36 H 0.07 -0.07 7.79 -51.93 -0.40 -0.47 16 37 H 0.07 0.05 7.79 -51.93 -0.40 -0.36 16 38 H 0.07 -0.04 7.79 -51.93 -0.40 -0.44 16 39 H 0.07 -0.04 7.48 -51.93 -0.39 -0.43 16 40 H 0.08 -0.30 7.21 -51.93 -0.37 -0.67 16 41 H 0.07 -0.12 7.21 -51.93 -0.37 -0.49 16 42 H 0.08 -0.24 7.66 -51.93 -0.40 -0.64 16 43 H 0.08 -0.13 7.66 -51.93 -0.40 -0.52 16 44 H 0.14 -0.29 6.30 -52.49 -0.33 -0.62 16 45 H 0.14 -0.36 8.06 -52.48 -0.42 -0.78 16 46 H 0.13 -0.04 4.88 -52.49 -0.26 -0.30 16 47 H 0.08 0.00 7.21 -51.93 -0.37 -0.38 16 48 H 0.38 -1.34 8.74 45.56 0.40 -0.94 16 LS Contribution 399.20 15.07 6.02 6.02 Total: 0.00 -6.12 399.20 -9.51 -15.63 By element: Atomic # 1 Polarization: -2.97 SS G_CDS: -7.46 Total: -10.43 kcal Atomic # 6 Polarization: -0.03 SS G_CDS: 0.85 Total: 0.82 kcal Atomic # 8 Polarization: -1.52 SS G_CDS: -1.02 Total: -2.54 kcal Atomic # 14 Polarization: -1.49 SS G_CDS: -5.77 Total: -7.26 kcal Atomic # 35 Polarization: -0.09 SS G_CDS: -2.14 Total: -2.23 kcal Total LS contribution 6.02 Total: 6.02 kcal Total: -6.12 -9.51 -15.63 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10910592_10902662.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -122.962 kcal (2) G-P(sol) polarization free energy of solvation -6.119 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -129.082 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.513 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.632 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.595 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds