Wall clock time and date at job start Mon Mar 8 2021 09:33:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47125 * 2 1 4 4 C 1.52995 * 109.47008 * 240.00039 * 2 1 3 5 5 O 1.42904 * 109.47242 * 119.99844 * 2 1 3 6 6 C 1.42901 * 113.99605 * 60.00153 * 5 2 1 7 7 H 1.08997 * 112.91312 * 18.74766 * 6 5 2 8 8 C 1.53781 * 113.61346 * 150.00029 * 6 5 2 9 9 C 1.53786 * 87.17350 * 139.93765 * 8 6 5 10 10 H 1.08993 * 113.61491 * 89.15923 * 9 8 6 11 11 C 1.52999 * 113.61361 * 220.06273 * 9 8 6 12 12 O 1.42904 * 109.47219 * 184.99801 * 11 9 8 13 13 C 1.35916 * 116.99743 * 179.97438 * 12 11 9 14 14 C 1.38793 * 120.05407 * 179.97438 * 13 12 11 15 15 Br 1.89099 * 120.03748 * 359.97438 * 14 13 12 16 16 C 1.38233 * 119.92854 * 180.02562 * 14 13 12 17 17 C 1.50698 * 119.98038 * 180.02562 * 16 14 13 18 18 O 1.42906 * 109.46802 * 284.99438 * 17 16 14 19 19 Si 1.86299 * 109.47296 * 164.99703 * 17 16 14 20 20 C 1.38247 * 120.04393 * 359.97376 * 16 14 13 21 21 C 1.38283 * 120.12073 * 0.05062 * 20 16 14 22 22 C 1.38146 * 120.06511 * 359.67582 * 21 20 16 23 23 C 1.53782 * 113.61110 * 247.49723 * 6 5 2 24 24 H 1.09008 * 109.46788 * 300.00009 * 1 2 3 25 25 H 1.08995 * 109.46967 * 59.99873 * 1 2 3 26 26 H 1.09002 * 109.47088 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.46839 * 180.02562 * 3 2 1 28 28 H 1.09000 * 109.46906 * 300.00145 * 3 2 1 29 29 H 1.08999 * 109.47243 * 60.00461 * 3 2 1 30 30 H 1.08998 * 109.47614 * 299.99842 * 4 2 1 31 31 H 1.09000 * 109.47201 * 59.99746 * 4 2 1 32 32 H 1.09008 * 109.47321 * 180.02562 * 4 2 1 33 33 H 1.09002 * 113.61445 * 254.52764 * 8 6 5 34 34 H 1.09002 * 113.61408 * 25.34495 * 8 6 5 35 35 H 1.09002 * 109.47053 * 305.00261 * 11 9 8 36 36 H 1.09004 * 109.47121 * 64.99898 * 11 9 8 37 37 H 1.08999 * 109.47008 * 44.99329 * 17 16 14 38 38 H 0.96698 * 114.00178 * 179.97438 * 18 17 16 39 39 H 1.48505 * 109.99905 * 298.67698 * 19 17 16 40 40 H 1.48500 * 110.00167 * 59.99847 * 19 17 16 41 41 H 1.08000 * 119.94084 * 180.02562 * 20 16 14 42 42 H 1.07996 * 119.96711 * 179.97438 * 21 20 16 43 43 H 1.08006 * 120.02242 * 180.32003 * 22 21 20 44 44 H 1.08997 * 113.61668 * 334.56520 * 23 6 5 45 45 H 1.08998 * 113.61674 * 105.39029 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2492 5 8 2.0064 -0.6736 1.1668 6 6 1.5847 -2.0355 1.2645 7 1 1.2512 -2.4459 0.3114 8 6 2.5837 -2.9379 2.0078 9 6 1.3683 -3.6127 2.6652 10 1 0.9755 -4.4550 2.0958 11 6 1.5749 -3.9393 4.1456 12 8 0.4449 -4.6639 4.6358 13 6 0.4693 -5.0342 5.9433 14 6 -0.5955 -5.7401 6.4858 15 35 -2.0827 -6.1872 5.4068 16 6 -0.5682 -6.1149 7.8161 17 6 -1.7235 -6.8818 8.4062 18 8 -2.8269 -5.9974 8.6116 19 14 -1.2093 -7.6223 10.0366 20 6 0.5187 -5.7877 8.6053 21 6 1.5804 -5.0841 8.0669 22 6 1.5606 -4.7120 6.7366 23 6 0.6077 -2.2962 2.4231 24 1 -0.3633 0.5139 0.8901 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 3.1301 1.4425 -0.0005 28 1 1.6766 1.9564 -0.8900 29 1 1.6768 1.9564 0.8900 30 1 1.6767 -1.7489 -1.2493 31 1 1.6766 -0.2074 -2.1392 32 1 3.1300 -0.7216 -1.2490 33 1 3.1477 -3.5993 1.3502 34 1 3.2182 -2.3995 2.7119 35 1 2.4735 -4.5451 4.2621 36 1 1.6853 -3.0132 4.7100 37 1 -2.0182 -7.6778 7.7224 38 1 -3.6079 -6.4241 8.9898 39 1 -0.0830 -8.5684 9.8320 40 1 -0.8050 -6.5472 10.9778 41 1 0.5385 -6.0818 9.6442 42 1 2.4281 -4.8294 8.6857 43 1 2.3926 -4.1669 6.3155 44 1 0.7009 -1.5828 3.2418 45 1 -0.4239 -2.4383 2.1008 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10910592_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:33:18 Heat of formation + Delta-G solvation = -58.861775 kcal Electronic energy + Delta-G solvation = -25594.127075 eV Core-core repulsion = 21818.996444 eV Total energy + Delta-G solvation = -3775.130631 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.082 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -41.53924 -40.80482 -39.27884 -38.14812 -37.22587 -33.93845 -33.47287 -32.10214 -30.36156 -29.20862 -28.41689 -28.30459 -26.82050 -26.66792 -24.00601 -23.57957 -22.04914 -20.82687 -20.66559 -18.91271 -18.41269 -17.90992 -17.51418 -17.28123 -17.05465 -16.51624 -16.04302 -15.86854 -15.71362 -15.17323 -14.66294 -14.63686 -14.50557 -14.41719 -14.11675 -13.93361 -13.53263 -13.48408 -13.35079 -13.15783 -13.08156 -12.84933 -12.69844 -12.59033 -12.44324 -12.25963 -12.12597 -11.95266 -11.87453 -11.73697 -11.69710 -11.39425 -11.22478 -10.92865 -10.36885 -10.28246 -9.87334 -9.26322 -5.00567 -0.05300 0.17404 0.79597 1.21832 1.61925 1.91191 1.97840 2.41007 2.70697 3.28923 3.39839 3.50116 3.65511 3.71813 3.75879 3.78645 3.86190 3.90978 3.93786 4.02759 4.05080 4.07857 4.13784 4.18638 4.29986 4.43732 4.46032 4.54215 4.60714 4.63104 4.71082 4.73530 4.74911 4.78957 4.86321 4.89358 4.91867 4.98099 5.06279 5.07831 5.12597 5.23955 5.26766 5.28620 5.33728 5.46953 6.20174 6.39141 6.63846 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.362 6.362 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.126 4.126 9 C -0.109 4.109 10 H 0.106 0.894 11 C 0.069 3.931 12 O -0.296 6.296 13 C 0.161 3.839 14 C -0.105 4.105 15 Br -0.023 7.023 16 C -0.008 4.008 17 C -0.080 4.080 18 O -0.535 6.535 19 Si 0.690 3.310 20 C -0.159 4.159 21 C -0.057 4.057 22 C -0.201 4.201 23 C -0.147 4.147 24 H 0.064 0.936 25 H 0.066 0.934 26 H 0.058 0.942 27 H 0.063 0.937 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.059 0.941 31 H 0.068 0.932 32 H 0.065 0.935 33 H 0.078 0.922 34 H 0.093 0.907 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.080 0.920 38 H 0.383 0.617 39 H -0.253 1.253 40 H -0.248 1.248 41 H 0.131 0.869 42 H 0.137 0.863 43 H 0.140 0.860 44 H 0.090 0.910 45 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.367 -1.286 -0.047 1.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.164 4.164 9 C -0.127 4.127 10 H 0.124 0.876 11 C -0.006 4.006 12 O -0.209 6.209 13 C 0.113 3.887 14 C -0.186 4.186 15 Br 0.063 6.937 16 C -0.010 4.010 17 C -0.190 4.190 18 O -0.341 6.341 19 Si 0.591 3.409 20 C -0.178 4.178 21 C -0.076 4.076 22 C -0.220 4.220 23 C -0.185 4.185 24 H 0.083 0.917 25 H 0.085 0.915 26 H 0.077 0.923 27 H 0.082 0.918 28 H 0.090 0.910 29 H 0.082 0.918 30 H 0.078 0.922 31 H 0.087 0.913 32 H 0.084 0.916 33 H 0.096 0.904 34 H 0.112 0.888 35 H 0.086 0.914 36 H 0.087 0.913 37 H 0.098 0.902 38 H 0.231 0.769 39 H -0.178 1.178 40 H -0.173 1.173 41 H 0.148 0.852 42 H 0.154 0.846 43 H 0.157 0.843 44 H 0.109 0.891 45 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges 0.851 -1.050 -0.163 1.362 hybrid contribution 0.546 0.274 -0.417 0.740 sum 1.397 -0.777 -0.580 1.701 Atomic orbital electron populations 1.22472 0.95430 1.02566 1.02936 1.21542 0.93272 0.93261 0.85345 1.21772 1.01981 0.93227 1.02636 1.22471 1.02304 1.00869 0.98003 1.88033 1.73824 1.23272 1.42954 1.23555 0.95566 0.82822 0.97612 0.88959 1.23226 0.96338 0.97330 0.99493 1.22336 0.98618 0.98218 0.93547 0.87623 1.22918 0.87459 0.95556 0.94618 1.86199 1.43370 1.69812 1.21521 1.18582 0.92855 0.93098 0.84163 1.20923 0.94962 1.07859 0.94813 1.96699 1.38182 1.92009 1.66822 1.19083 0.94769 0.96071 0.91125 1.24779 0.88873 0.95573 1.09810 1.86523 1.24088 1.36749 1.86732 0.95145 0.86280 0.81417 0.78072 1.20911 0.94768 1.02426 0.99650 1.21016 0.97695 0.94468 0.94382 1.21309 0.98942 1.06574 0.95204 1.23647 0.99167 0.96173 0.99523 0.91657 0.91512 0.92262 0.91774 0.91047 0.91757 0.92227 0.91330 0.91611 0.90361 0.88823 0.91415 0.91340 0.90162 0.76931 1.17758 1.17289 0.85215 0.84562 0.84251 0.89125 0.90812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.03 8.38 37.16 0.31 0.34 16 2 C 0.10 0.04 1.11 -90.62 -0.10 -0.06 16 3 C -0.14 0.01 8.84 37.16 0.33 0.34 16 4 C -0.18 0.09 8.38 37.16 0.31 0.41 16 5 O -0.36 -0.67 10.00 -35.23 -0.35 -1.02 16 6 C 0.06 0.01 2.82 -25.92 -0.07 -0.07 16 7 H 0.09 -0.06 5.55 -51.93 -0.29 -0.35 16 8 C -0.13 0.11 7.47 -25.92 -0.19 -0.09 16 9 C -0.11 0.05 4.02 -89.71 -0.36 -0.31 16 10 H 0.11 -0.04 8.14 -51.93 -0.42 -0.47 16 11 C 0.07 0.00 4.58 37.16 0.17 0.17 16 12 O -0.30 -0.83 9.47 -19.48 -0.18 -1.01 16 13 C 0.16 0.53 6.68 -39.20 -0.26 0.27 16 14 C -0.11 -0.43 6.23 -39.38 -0.25 -0.68 16 15 Br -0.02 -0.08 31.44 -68.01 -2.14 -2.22 16 16 C -0.01 -0.03 5.29 -104.62 -0.55 -0.58 16 17 C -0.08 -0.07 2.01 36.00 0.07 0.00 16 18 O -0.53 -0.49 12.67 -35.23 -0.45 -0.94 16 19 Si 0.69 -0.59 30.19 -169.99 -5.13 -5.72 16 20 C -0.16 -0.40 8.66 -39.56 -0.34 -0.74 16 21 C -0.06 -0.07 10.04 -39.60 -0.40 -0.47 16 22 C -0.20 -0.30 9.04 -39.44 -0.36 -0.65 16 23 C -0.15 -0.04 7.47 -25.82 -0.19 -0.23 16 24 H 0.06 0.03 8.14 -51.92 -0.42 -0.39 16 25 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 26 H 0.06 -0.02 7.02 -51.93 -0.36 -0.38 16 27 H 0.06 0.01 8.14 -51.92 -0.42 -0.41 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.06 -0.05 6.25 -51.93 -0.32 -0.37 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.06 -0.01 8.14 -51.92 -0.42 -0.43 16 33 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 34 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 35 H 0.07 -0.08 7.65 -51.93 -0.40 -0.48 16 36 H 0.07 -0.04 7.38 -51.93 -0.38 -0.42 16 37 H 0.08 0.01 7.22 -51.93 -0.38 -0.37 16 38 H 0.38 -1.57 8.74 45.56 0.40 -1.17 16 39 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 40 H -0.25 -0.42 6.75 56.52 0.38 -0.03 16 41 H 0.13 0.21 4.89 -52.49 -0.26 -0.05 16 42 H 0.14 -0.19 8.06 -52.49 -0.42 -0.61 16 43 H 0.14 -0.12 6.30 -52.48 -0.33 -0.45 16 44 H 0.09 0.09 7.90 -51.93 -0.41 -0.32 16 45 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 LS Contribution 375.12 15.07 5.65 5.65 Total: 0.00 -6.15 375.12 -11.51 -17.65 By element: Atomic # 1 Polarization: -3.02 SS G_CDS: -7.02 Total: -10.04 kcal Atomic # 6 Polarization: -0.46 SS G_CDS: -1.88 Total: -2.35 kcal Atomic # 8 Polarization: -1.99 SS G_CDS: -0.98 Total: -2.97 kcal Atomic # 14 Polarization: -0.59 SS G_CDS: -5.13 Total: -5.72 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.14 Total: -2.22 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -6.15 -11.51 -17.65 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10910592_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -41.211 kcal (2) G-P(sol) polarization free energy of solvation -6.146 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.356 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.505 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.651 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds