Wall clock time and date at job start Mon Mar 8 2021 09:33:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52999 * 1 3 3 C 1.53005 * 109.47125 * 2 1 4 4 C 1.52995 * 109.47008 * 240.00039 * 2 1 3 5 5 O 1.42904 * 109.47242 * 119.99844 * 2 1 3 6 6 C 1.42901 * 113.99605 * 60.00153 * 5 2 1 7 7 H 1.08997 * 112.91312 * 18.74766 * 6 5 2 8 8 C 1.53781 * 113.61346 * 150.00029 * 6 5 2 9 9 C 1.53786 * 87.17350 * 139.93765 * 8 6 5 10 10 H 1.08993 * 113.61491 * 89.15923 * 9 8 6 11 11 C 1.52999 * 113.61361 * 220.06273 * 9 8 6 12 12 O 1.42904 * 109.47219 * 184.99801 * 11 9 8 13 13 C 1.35916 * 116.99743 * 179.97438 * 12 11 9 14 14 C 1.38793 * 120.05407 * 179.97438 * 13 12 11 15 15 Br 1.89099 * 120.03748 * 359.97438 * 14 13 12 16 16 C 1.38233 * 119.92854 * 180.02562 * 14 13 12 17 17 C 1.50698 * 119.98038 * 180.02562 * 16 14 13 18 18 O 1.42906 * 109.46802 * 284.99438 * 17 16 14 19 19 Si 1.86299 * 109.47296 * 164.99703 * 17 16 14 20 20 C 1.38247 * 120.04393 * 359.97376 * 16 14 13 21 21 C 1.38283 * 120.12073 * 0.05062 * 20 16 14 22 22 C 1.38146 * 120.06511 * 359.67582 * 21 20 16 23 23 C 1.53782 * 113.61110 * 247.49723 * 6 5 2 24 24 H 1.09008 * 109.46788 * 300.00009 * 1 2 3 25 25 H 1.08995 * 109.46967 * 59.99873 * 1 2 3 26 26 H 1.09002 * 109.47088 * 180.02562 * 1 2 3 27 27 H 1.09008 * 109.46839 * 180.02562 * 3 2 1 28 28 H 1.09000 * 109.46906 * 300.00145 * 3 2 1 29 29 H 1.08999 * 109.47243 * 60.00461 * 3 2 1 30 30 H 1.08998 * 109.47614 * 299.99842 * 4 2 1 31 31 H 1.09000 * 109.47201 * 59.99746 * 4 2 1 32 32 H 1.09008 * 109.47321 * 180.02562 * 4 2 1 33 33 H 1.09002 * 113.61445 * 254.52764 * 8 6 5 34 34 H 1.09002 * 113.61408 * 25.34495 * 8 6 5 35 35 H 1.09002 * 109.47053 * 305.00261 * 11 9 8 36 36 H 1.09004 * 109.47121 * 64.99898 * 11 9 8 37 37 H 1.08999 * 109.47008 * 44.99329 * 17 16 14 38 38 H 0.96698 * 114.00178 * 179.97438 * 18 17 16 39 39 H 1.48505 * 109.99905 * 298.67698 * 19 17 16 40 40 H 1.48500 * 110.00167 * 59.99847 * 19 17 16 41 41 H 1.08000 * 119.94084 * 180.02562 * 20 16 14 42 42 H 1.07996 * 119.96711 * 179.97438 * 21 20 16 43 43 H 1.08006 * 120.02242 * 180.32003 * 22 21 20 44 44 H 1.08997 * 113.61668 * 334.56520 * 23 6 5 45 45 H 1.08998 * 113.61674 * 105.39029 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0399 -0.7212 -1.2492 5 8 2.0064 -0.6736 1.1668 6 6 1.5847 -2.0355 1.2645 7 1 1.2512 -2.4459 0.3114 8 6 2.5837 -2.9379 2.0078 9 6 1.3683 -3.6127 2.6652 10 1 0.9755 -4.4550 2.0958 11 6 1.5749 -3.9393 4.1456 12 8 0.4449 -4.6639 4.6358 13 6 0.4693 -5.0342 5.9433 14 6 -0.5955 -5.7401 6.4858 15 35 -2.0827 -6.1872 5.4068 16 6 -0.5682 -6.1149 7.8161 17 6 -1.7235 -6.8818 8.4062 18 8 -2.8269 -5.9974 8.6116 19 14 -1.2093 -7.6223 10.0366 20 6 0.5187 -5.7877 8.6053 21 6 1.5804 -5.0841 8.0669 22 6 1.5606 -4.7120 6.7366 23 6 0.6077 -2.2962 2.4231 24 1 -0.3633 0.5139 0.8901 25 1 -0.3633 0.5138 -0.8899 26 1 -0.3633 -1.0277 0.0005 27 1 3.1301 1.4425 -0.0005 28 1 1.6766 1.9564 -0.8900 29 1 1.6768 1.9564 0.8900 30 1 1.6767 -1.7489 -1.2493 31 1 1.6766 -0.2074 -2.1392 32 1 3.1300 -0.7216 -1.2490 33 1 3.1477 -3.5993 1.3502 34 1 3.2182 -2.3995 2.7119 35 1 2.4735 -4.5451 4.2621 36 1 1.6853 -3.0132 4.7100 37 1 -2.0182 -7.6778 7.7224 38 1 -3.6079 -6.4241 8.9898 39 1 -0.0830 -8.5684 9.8320 40 1 -0.8050 -6.5472 10.9778 41 1 0.5385 -6.0818 9.6442 42 1 2.4281 -4.8294 8.6857 43 1 2.3926 -4.1669 6.3155 44 1 0.7009 -1.5828 3.2418 45 1 -0.4239 -2.4383 2.1008 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_10910592_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:33:17 Heat of formation + Delta-G solvation = -52.894536 kcal Electronic energy + Delta-G solvation = -25593.868316 eV Core-core repulsion = 21818.996444 eV Total energy + Delta-G solvation = -3774.871872 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.082 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -41.62555 -40.83419 -39.35039 -38.16447 -37.26865 -33.96669 -33.60399 -32.21393 -30.49598 -29.26336 -28.38170 -28.29622 -26.88659 -26.65254 -24.02747 -23.70665 -22.12444 -20.83321 -20.65737 -18.99799 -18.43360 -17.95145 -17.61016 -17.36081 -17.11123 -16.53385 -16.07848 -15.90262 -15.73813 -15.20884 -14.71116 -14.67733 -14.54561 -14.49656 -14.17744 -13.99016 -13.56684 -13.47304 -13.32706 -13.19064 -13.05862 -12.83175 -12.69293 -12.62309 -12.51085 -12.28477 -12.16041 -12.04554 -11.95668 -11.82106 -11.72335 -11.38527 -11.21815 -11.15321 -10.39159 -10.29713 -10.01505 -9.42578 -4.95457 -0.18250 0.02375 0.59145 1.23580 1.64643 1.88343 1.94325 2.29222 2.71383 3.26516 3.41485 3.51052 3.63289 3.72006 3.73493 3.78501 3.82028 3.88794 3.95460 4.00239 4.06200 4.09479 4.10340 4.20442 4.30846 4.34706 4.48753 4.58331 4.59502 4.65036 4.74171 4.75106 4.75997 4.80076 4.82790 4.89140 4.91320 4.96049 4.99134 5.09720 5.12358 5.13649 5.27951 5.30396 5.34624 5.40509 6.11285 6.38716 6.87936 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.098 3.902 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.380 6.380 6 C 0.060 3.940 7 H 0.100 0.900 8 C -0.119 4.119 9 C -0.102 4.102 10 H 0.106 0.894 11 C 0.065 3.935 12 O -0.311 6.311 13 C 0.149 3.851 14 C -0.131 4.131 15 Br -0.031 7.031 16 C -0.026 4.026 17 C -0.094 4.094 18 O -0.553 6.553 19 Si 0.788 3.212 20 C -0.176 4.176 21 C -0.056 4.056 22 C -0.202 4.202 23 C -0.149 4.149 24 H 0.055 0.945 25 H 0.076 0.924 26 H 0.059 0.941 27 H 0.060 0.940 28 H 0.084 0.916 29 H 0.056 0.944 30 H 0.062 0.938 31 H 0.077 0.923 32 H 0.061 0.939 33 H 0.089 0.911 34 H 0.093 0.907 35 H 0.083 0.917 36 H 0.073 0.927 37 H 0.084 0.916 38 H 0.403 0.597 39 H -0.286 1.286 40 H -0.281 1.281 41 H 0.135 0.865 42 H 0.164 0.836 43 H 0.163 0.837 44 H 0.080 0.920 45 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.934 -1.432 -0.050 1.710 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.060 3.940 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.300 6.300 6 C 0.003 3.997 7 H 0.117 0.883 8 C -0.156 4.156 9 C -0.121 4.121 10 H 0.124 0.876 11 C -0.009 4.009 12 O -0.224 6.224 13 C 0.101 3.899 14 C -0.211 4.211 15 Br 0.055 6.945 16 C -0.028 4.028 17 C -0.203 4.203 18 O -0.363 6.363 19 Si 0.691 3.309 20 C -0.194 4.194 21 C -0.074 4.074 22 C -0.221 4.221 23 C -0.187 4.187 24 H 0.074 0.926 25 H 0.095 0.905 26 H 0.078 0.922 27 H 0.079 0.921 28 H 0.102 0.898 29 H 0.075 0.925 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.080 0.920 33 H 0.108 0.892 34 H 0.111 0.889 35 H 0.101 0.899 36 H 0.091 0.909 37 H 0.102 0.898 38 H 0.254 0.746 39 H -0.213 1.213 40 H -0.209 1.209 41 H 0.152 0.848 42 H 0.182 0.818 43 H 0.180 0.820 44 H 0.099 0.901 45 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 1.384 -1.198 -0.181 1.839 hybrid contribution 0.387 0.366 -0.427 0.683 sum 1.772 -0.831 -0.608 2.049 Atomic orbital electron populations 1.22448 0.95191 1.02582 1.02940 1.21675 0.93521 0.93460 0.85386 1.21795 1.01748 0.93172 1.02929 1.22447 1.02022 1.01078 0.97838 1.88008 1.74168 1.24092 1.43753 1.23648 0.95835 0.82421 0.97844 0.88282 1.23186 0.96038 0.97050 0.99375 1.22285 0.98642 0.97722 0.93442 0.87628 1.23081 0.87309 0.95809 0.94688 1.86179 1.44617 1.70115 1.21478 1.18811 0.93296 0.93244 0.84583 1.21153 0.95343 1.09217 0.95364 1.96651 1.38692 1.92142 1.67058 1.19474 0.95852 0.96351 0.91171 1.25063 0.88569 0.95359 1.11302 1.86471 1.25037 1.37621 1.87134 0.94067 0.84006 0.78086 0.74693 1.21136 0.95211 1.03118 0.99955 1.21391 0.98031 0.93323 0.94629 1.21597 0.99012 1.06318 0.95206 1.23623 0.99089 0.96542 0.99448 0.92580 0.90542 0.92245 0.92131 0.89756 0.92476 0.91893 0.90433 0.92002 0.89241 0.88880 0.89932 0.90884 0.89775 0.74620 1.21328 1.20869 0.84780 0.81830 0.81965 0.90108 0.91368 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.01 8.38 71.98 0.60 0.62 16 2 C 0.10 0.09 1.11 -10.79 -0.01 0.08 16 3 C -0.14 -0.01 8.84 71.98 0.64 0.63 16 4 C -0.18 0.25 8.38 71.98 0.60 0.85 16 5 O -0.38 -1.56 10.00 -148.98 -1.49 -3.05 16 6 C 0.06 0.02 2.82 31.12 0.09 0.11 16 7 H 0.10 -0.13 5.55 -2.39 -0.01 -0.14 16 8 C -0.12 0.24 7.47 31.12 0.23 0.48 16 9 C -0.10 0.09 4.02 -10.20 -0.04 0.05 16 10 H 0.11 -0.07 8.14 -2.39 -0.02 -0.09 16 11 C 0.07 -0.01 4.58 71.98 0.33 0.32 16 12 O -0.31 -1.92 9.47 -92.61 -0.88 -2.80 16 13 C 0.15 1.07 6.68 22.52 0.15 1.22 16 14 C -0.13 -1.21 6.23 22.40 0.14 -1.07 16 15 Br -0.03 -0.27 31.44 -20.37 -0.64 -0.91 16 16 C -0.03 -0.20 5.29 -19.86 -0.11 -0.30 16 17 C -0.09 -0.22 2.01 71.24 0.14 -0.08 16 18 O -0.55 -1.23 12.67 -148.98 -1.89 -3.12 16 19 Si 0.79 -1.29 30.19 68.60 2.07 0.78 16 20 C -0.18 -0.93 8.66 22.28 0.19 -0.74 16 21 C -0.06 -0.11 10.04 22.26 0.22 0.11 16 22 C -0.20 -0.52 9.04 22.36 0.20 -0.32 16 23 C -0.15 -0.19 7.47 31.18 0.23 0.05 16 24 H 0.06 0.10 8.14 -2.38 -0.02 0.08 16 25 H 0.08 -0.17 8.14 -2.39 -0.02 -0.19 16 26 H 0.06 -0.01 7.02 -2.39 -0.02 -0.03 16 27 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 28 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 30 H 0.06 -0.13 6.25 -2.39 -0.01 -0.15 16 31 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 32 H 0.06 -0.03 8.14 -2.38 -0.02 -0.05 16 33 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 34 H 0.09 -0.16 8.10 -2.39 -0.02 -0.18 16 35 H 0.08 -0.27 7.65 -2.39 -0.02 -0.28 16 36 H 0.07 -0.09 7.38 -2.38 -0.02 -0.10 16 37 H 0.08 0.08 7.22 -2.39 -0.02 0.06 16 38 H 0.40 -3.34 8.74 -74.06 -0.65 -3.99 16 39 H -0.29 -1.06 7.11 99.48 0.71 -0.35 16 40 H -0.28 -1.05 6.75 99.48 0.67 -0.37 16 41 H 0.13 0.48 4.89 -2.91 -0.01 0.46 16 42 H 0.16 -0.71 8.06 -2.91 -0.02 -0.73 16 43 H 0.16 -0.48 6.30 -2.91 -0.02 -0.50 16 44 H 0.08 0.26 7.90 -2.39 -0.02 0.24 16 45 H 0.07 0.14 8.14 -2.39 -0.02 0.12 16 Total: 0.00 -15.27 375.12 1.14 -14.13 By element: Atomic # 1 Polarization: -7.38 SS G_CDS: 0.34 Total: -7.03 kcal Atomic # 6 Polarization: -1.62 SS G_CDS: 3.62 Total: 2.00 kcal Atomic # 8 Polarization: -4.72 SS G_CDS: -4.25 Total: -8.97 kcal Atomic # 14 Polarization: -1.29 SS G_CDS: 2.07 Total: 0.78 kcal Atomic # 35 Polarization: -0.27 SS G_CDS: -0.64 Total: -0.91 kcal Total: -15.27 1.14 -14.13 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10910592_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.766 kcal (2) G-P(sol) polarization free energy of solvation -15.269 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -54.034 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.140 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.129 kcal (6) G-S(sol) free energy of system = (1) + (5) -52.895 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds