Wall clock time and date at job start Mon Mar 8 2021 07:39:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42892 * 114.00029 * 2 1 4 4 C 1.52998 * 112.84999 * 294.12515 * 3 2 1 5 5 F 1.39902 * 109.47123 * 195.75395 * 4 3 2 6 6 F 1.39897 * 109.47228 * 315.74743 * 4 3 2 7 7 F 1.39901 * 109.47216 * 75.75229 * 4 3 2 8 8 C 1.53787 * 113.61135 * 162.82163 * 3 2 1 9 9 C 1.53781 * 87.07897 * 270.88092 * 8 3 2 10 10 H 1.09004 * 113.61609 * 220.02137 * 9 8 3 11 11 C 1.52997 * 113.61377 * 89.11800 * 9 8 3 12 12 O 1.42906 * 109.47072 * 87.50333 * 11 9 8 13 13 C 1.35920 * 116.99561 * 180.02562 * 12 11 9 14 14 C 1.38791 * 120.05157 * 179.72326 * 13 12 11 15 15 Br 1.89095 * 120.03969 * 0.02562 * 14 13 12 16 16 C 1.38244 * 119.92336 * 179.72741 * 14 13 12 17 17 C 1.50699 * 119.97468 * 180.27473 * 16 14 13 18 18 O 1.42901 * 109.46926 * 285.29129 * 17 16 14 19 19 Si 1.86305 * 109.47071 * 165.29327 * 17 16 14 20 20 C 1.38237 * 120.04602 * 0.56525 * 16 14 13 21 21 C 1.38286 * 120.11895 * 359.70796 * 20 16 14 22 22 C 1.38147 * 120.06747 * 359.97438 * 21 20 16 23 23 C 1.53776 * 87.08449 * 334.56825 * 9 8 3 24 24 H 1.09007 * 109.46849 * 63.09195 * 1 2 3 25 25 H 1.09001 * 109.47573 * 183.09139 * 1 2 3 26 26 H 1.09004 * 109.47189 * 303.09565 * 1 2 3 27 27 H 1.09000 * 113.61240 * 156.33529 * 8 3 2 28 28 H 1.08995 * 113.61814 * 25.43241 * 8 3 2 29 29 H 1.09003 * 109.47174 * 207.49805 * 11 9 8 30 30 H 1.08998 * 109.47335 * 327.50323 * 11 9 8 31 31 H 1.08997 * 109.47505 * 45.29685 * 17 16 14 32 32 H 0.96699 * 113.99948 * 299.99682 * 18 17 16 33 33 H 1.48493 * 110.00280 * 179.97438 * 19 17 16 34 34 H 1.48499 * 110.00177 * 301.31847 * 19 17 16 35 35 H 1.08003 * 119.94319 * 179.72924 * 20 16 14 36 36 H 1.07999 * 119.96506 * 180.02562 * 21 20 16 37 37 H 1.08003 * 120.02013 * 180.02562 * 22 21 20 38 38 H 1.08998 * 113.61812 * 139.98059 * 23 9 8 39 39 H 1.09003 * 113.61809 * 270.88274 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7254 2.0825 -1.2868 5 9 2.5971 3.1732 -1.3755 6 9 1.9149 1.2434 -2.3900 7 9 0.4040 2.5417 -1.2715 8 6 3.4906 1.3205 0.4162 9 6 3.0003 1.4808 1.8649 10 1 3.5980 2.1766 2.4537 11 6 2.7579 0.1504 2.5806 12 8 3.9738 -0.2930 3.1866 13 6 3.9310 -1.4688 3.8671 14 6 5.0768 -1.9618 4.4755 15 35 6.6996 -0.9980 4.3595 16 6 5.0290 -3.1551 5.1718 17 6 6.2710 -3.6884 5.8381 18 8 7.1520 -4.2210 4.8470 19 14 5.8026 -5.0329 7.0397 20 6 3.8441 -3.8626 5.2520 21 6 2.7026 -3.3759 4.6417 22 6 2.7434 -2.1806 3.9503 23 6 1.7234 2.1074 1.2804 24 1 -0.3633 0.4651 -0.9165 25 1 -0.3634 -1.0261 0.0554 26 1 -0.3634 0.5612 0.8610 27 1 4.0402 2.1847 0.0431 28 1 4.0058 0.3780 0.2313 29 1 1.9968 0.2848 3.3492 30 1 2.4189 -0.5935 1.8596 31 1 6.7715 -2.8813 6.3731 32 1 6.7717 -4.9451 4.3311 33 1 7.0188 -5.5676 7.7031 34 1 4.8615 -4.4996 8.0571 35 1 3.8097 -4.7969 5.7927 36 1 1.7781 -3.9305 4.7064 37 1 1.8513 -1.8011 3.4742 38 1 0.8120 1.8001 1.7931 39 1 1.7899 3.1868 1.1436 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_10910592_17321602.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:39:28 Heat of formation + Delta-G solvation = -191.765292 kcal Electronic energy + Delta-G solvation = -29931.880652 eV Core-core repulsion = 25053.700203 eV Total energy + Delta-G solvation = -4878.180449 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.022 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -51.19984 -48.74669 -48.63194 -41.90731 -41.09691 -39.18984 -37.45951 -37.02869 -33.47151 -32.11102 -30.81010 -29.78271 -28.38762 -27.61458 -26.94736 -26.61865 -23.70484 -23.51377 -22.32230 -20.68333 -19.87893 -19.50370 -19.27997 -19.13123 -17.95398 -17.45023 -17.32673 -17.11613 -16.95039 -16.62127 -16.23384 -15.90198 -15.67427 -15.53386 -15.51530 -15.22451 -15.11757 -14.90244 -14.82193 -14.76389 -14.48292 -14.22851 -14.18991 -13.91902 -13.51458 -13.37536 -13.12751 -12.96527 -12.76596 -12.49627 -12.25661 -12.07721 -11.92794 -11.84146 -11.76047 -11.73769 -10.94248 -10.85011 -10.47153 -9.88977 -9.28720 -5.06476 -0.07358 0.15753 0.79754 1.22109 1.51318 1.62870 1.82083 1.93460 1.99300 2.41384 2.48834 2.58303 2.80653 3.16667 3.28685 3.34769 3.44643 3.54643 3.55516 3.76840 3.87720 3.94590 3.98073 4.07106 4.09935 4.17997 4.23930 4.27829 4.30202 4.42363 4.42695 4.50644 4.57553 4.61762 4.68376 4.83461 4.91442 5.04818 5.21831 5.45413 5.54253 6.15353 6.57754 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.332 6.332 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.174 7.174 6 F -0.174 7.174 7 F -0.182 7.182 8 C -0.111 4.111 9 C -0.098 4.098 10 H 0.108 0.892 11 C 0.068 3.932 12 O -0.297 6.297 13 C 0.160 3.840 14 C -0.106 4.106 15 Br -0.024 7.024 16 C -0.056 4.056 17 C -0.075 4.075 18 O -0.525 6.525 19 Si 0.689 3.311 20 C -0.149 4.149 21 C -0.058 4.058 22 C -0.200 4.200 23 C -0.142 4.142 24 H 0.054 0.946 25 H 0.102 0.898 26 H 0.055 0.945 27 H 0.117 0.883 28 H 0.100 0.900 29 H 0.068 0.932 30 H 0.087 0.913 31 H 0.119 0.881 32 H 0.377 0.623 33 H -0.251 1.251 34 H -0.255 1.255 35 H 0.138 0.862 36 H 0.137 0.863 37 H 0.138 0.862 38 H 0.094 0.906 39 H 0.113 0.887 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.226 -2.371 1.103 5.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.250 6.250 3 C -0.004 4.004 4 C 0.382 3.618 5 F -0.156 7.156 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.148 4.148 9 C -0.116 4.116 10 H 0.126 0.874 11 C -0.007 4.007 12 O -0.210 6.210 13 C 0.112 3.888 14 C -0.187 4.187 15 Br 0.062 6.938 16 C -0.058 4.058 17 C -0.186 4.186 18 O -0.330 6.330 19 Si 0.590 3.410 20 C -0.167 4.167 21 C -0.077 4.077 22 C -0.219 4.219 23 C -0.180 4.180 24 H 0.073 0.927 25 H 0.121 0.879 26 H 0.074 0.926 27 H 0.135 0.865 28 H 0.118 0.882 29 H 0.087 0.913 30 H 0.105 0.895 31 H 0.136 0.864 32 H 0.224 0.776 33 H -0.176 1.176 34 H -0.180 1.180 35 H 0.155 0.845 36 H 0.155 0.845 37 H 0.155 0.845 38 H 0.113 0.887 39 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -3.950 -1.822 2.066 4.816 hybrid contribution -0.980 0.799 -0.560 1.383 sum -4.930 -1.023 1.506 5.256 Atomic orbital electron populations 1.23158 0.79497 1.04363 1.01650 1.88084 1.21119 1.21955 1.93855 1.24055 1.00100 0.86271 0.89946 1.21162 0.74308 0.78749 0.87538 1.93185 1.69480 1.56305 1.96602 1.93223 1.94764 1.70939 1.56568 1.93191 1.36527 1.89766 1.96845 1.23266 0.90796 1.05927 0.94839 1.22055 0.97531 0.96366 0.95688 0.87406 1.22818 0.85219 0.95940 0.96709 1.86154 1.35548 1.34436 1.64860 1.18580 0.92747 0.85950 0.91500 1.20960 0.91997 0.98481 1.07220 1.96747 1.26399 1.73157 1.97540 1.20161 0.96390 0.92906 0.96379 1.25230 0.90451 1.05174 0.97699 1.86597 1.40145 1.54732 1.51537 0.94901 0.81881 0.84208 0.80054 1.20883 0.92164 1.00600 1.03097 1.21058 0.98453 0.94374 0.93767 1.21305 0.97130 0.97871 1.05599 1.23598 0.99497 1.01223 0.93654 0.92716 0.87945 0.92642 0.86467 0.88173 0.91342 0.89520 0.86369 0.77571 1.17559 1.17961 0.84469 0.84491 0.84452 0.88717 0.86843 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.02 16 2 O -0.33 0.23 8.36 -35.23 -0.29 -0.07 16 3 C 0.04 -0.04 0.84 -89.80 -0.08 -0.12 16 4 C 0.44 0.31 2.52 37.16 0.09 0.40 16 5 F -0.17 -0.17 15.82 2.25 0.04 -0.13 16 6 F -0.17 -0.44 17.11 2.25 0.04 -0.40 16 7 F -0.18 -0.17 15.34 2.25 0.03 -0.13 16 8 C -0.11 0.16 6.89 -25.92 -0.18 -0.01 16 9 C -0.10 0.22 4.20 -89.81 -0.38 -0.16 16 10 H 0.11 -0.26 8.14 -51.93 -0.42 -0.68 16 11 C 0.07 -0.11 4.32 37.16 0.16 0.05 16 12 O -0.30 -0.35 9.47 -19.49 -0.18 -0.54 16 13 C 0.16 0.22 6.68 -39.20 -0.26 -0.04 16 14 C -0.11 -0.24 6.23 -39.37 -0.25 -0.48 16 15 Br -0.02 -0.08 31.43 -68.01 -2.14 -2.22 16 16 C -0.06 -0.03 5.26 -104.62 -0.55 -0.58 16 17 C -0.07 -0.03 2.02 36.01 0.07 0.05 16 18 O -0.53 -0.29 12.68 -35.23 -0.45 -0.73 16 19 Si 0.69 -0.83 29.91 -169.99 -5.09 -5.92 16 20 C -0.15 0.21 8.66 -39.56 -0.34 -0.14 16 21 C -0.06 0.10 10.04 -39.60 -0.40 -0.29 16 22 C -0.20 0.15 9.04 -39.44 -0.36 -0.21 16 23 C -0.14 0.42 6.52 -25.92 -0.17 0.26 16 24 H 0.05 -0.09 6.56 -51.93 -0.34 -0.43 16 25 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 26 H 0.06 -0.22 6.60 -51.93 -0.34 -0.56 16 27 H 0.12 -0.25 7.03 -51.93 -0.37 -0.62 16 28 H 0.10 -0.07 8.10 -51.93 -0.42 -0.49 16 29 H 0.07 -0.19 7.66 -51.93 -0.40 -0.59 16 30 H 0.09 -0.13 5.64 -51.93 -0.29 -0.42 16 31 H 0.12 0.19 7.24 -51.93 -0.38 -0.18 16 32 H 0.38 -1.32 8.70 45.56 0.40 -0.92 16 33 H -0.25 -0.51 7.11 56.52 0.40 -0.11 16 34 H -0.26 -0.29 7.11 56.52 0.40 0.11 16 35 H 0.14 -0.55 5.12 -52.48 -0.27 -0.81 16 36 H 0.14 -0.60 8.06 -52.49 -0.42 -1.02 16 37 H 0.14 -0.37 6.30 -52.48 -0.33 -0.70 16 38 H 0.09 -0.38 6.64 -51.93 -0.34 -0.73 16 39 H 0.11 -0.41 8.04 -51.93 -0.42 -0.82 16 LS Contribution 345.85 15.07 5.21 5.21 Total: 0.00 -6.61 345.85 -8.38 -14.99 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: -3.97 Total: -9.81 kcal Atomic # 6 Polarization: 1.33 SS G_CDS: -1.58 Total: -0.25 kcal Atomic # 8 Polarization: -0.41 SS G_CDS: -0.93 Total: -1.34 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.11 Total: -0.66 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.09 Total: -5.92 kcal Atomic # 35 Polarization: -0.08 SS G_CDS: -2.14 Total: -2.22 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -6.61 -8.38 -14.99 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_10910592_17321602.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -176.778 kcal (2) G-P(sol) polarization free energy of solvation -6.608 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -183.387 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.379 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.987 kcal (6) G-S(sol) free energy of system = (1) + (5) -191.765 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds