Wall clock time and date at job start Mon Mar 8 2021 09:14:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35898 * 117.00154 * 2 1 4 4 C 1.38618 * 120.02578 * 0.27162 * 3 2 1 5 5 C 1.38648 * 119.89175 * 180.25391 * 4 3 2 6 6 O 1.35891 * 120.03055 * 179.74905 * 5 4 3 7 7 C 1.42906 * 116.99892 * 359.72372 * 6 5 4 8 8 C 1.53001 * 109.47074 * 179.97438 * 7 6 5 9 9 H 1.09003 * 112.84746 * 43.80548 * 8 7 6 10 10 C 1.53781 * 113.61341 * 174.99918 * 8 7 6 11 11 C 1.53781 * 87.08070 * 140.06609 * 10 8 7 12 12 H 1.09002 * 113.61445 * 89.11830 * 11 10 8 13 13 O 1.42905 * 113.61505 * 219.93701 * 11 10 8 14 14 C 1.53786 * 87.17350 * 334.52830 * 11 10 8 15 15 C 1.38761 * 119.94411 * 359.47331 * 5 4 3 16 16 C 1.38196 * 120.05402 * 0.25428 * 15 5 4 17 17 C 1.50698 * 119.94804 * 179.97438 * 16 15 5 18 18 O 1.42904 * 109.46940 * 64.99767 * 17 16 15 19 19 Si 1.86298 * 109.47490 * 184.99931 * 17 16 15 20 20 C 1.38163 * 120.10648 * 0.02562 * 16 15 5 21 21 H 1.09002 * 109.47573 * 300.00332 * 1 2 3 22 22 H 1.09001 * 109.47149 * 60.00713 * 1 2 3 23 23 H 1.09001 * 109.47305 * 180.02562 * 1 2 3 24 24 H 1.08006 * 120.05482 * 359.97438 * 4 3 2 25 25 H 1.09002 * 109.46916 * 60.00035 * 7 6 5 26 26 H 1.08998 * 109.46991 * 300.00130 * 7 6 5 27 27 H 1.08999 * 113.61181 * 25.51665 * 10 8 7 28 28 H 1.08998 * 113.61680 * 254.61217 * 10 8 7 29 29 H 0.96696 * 114.00145 * 178.47219 * 13 11 10 30 30 H 1.08992 * 113.61675 * 140.02412 * 14 11 10 31 31 H 1.09000 * 113.60973 * 270.92699 * 14 11 10 32 32 H 1.07995 * 119.97132 * 180.27336 * 15 5 4 33 33 H 1.08997 * 109.46632 * 304.99977 * 17 16 15 34 34 H 0.96695 * 114.00024 * 180.02562 * 18 17 16 35 35 H 1.48490 * 110.00018 * 178.68045 * 19 17 16 36 36 H 1.48501 * 109.99585 * 300.00142 * 19 17 16 37 37 H 1.08004 * 119.96686 * 179.97438 * 20 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 1.2916 2.3737 0.0057 5 6 1.9239 3.6076 0.0003 6 8 1.1871 4.7494 0.0007 7 6 -0.2346 4.6041 0.0007 8 6 -0.8886 5.9873 0.0018 9 1 -0.4142 6.6804 -0.6930 10 6 -2.4209 5.9443 -0.1210 11 6 -2.4569 7.0852 0.9094 12 1 -2.4113 8.0785 0.4628 13 8 -3.5073 6.9564 1.8698 14 6 -1.0968 6.5726 1.4115 15 6 3.3098 3.6757 0.0004 16 6 4.0598 2.5149 0.0004 17 6 5.5648 2.5915 -0.0001 18 8 6.0119 3.1848 1.2206 19 14 6.2740 0.8756 -0.1530 20 6 3.4319 1.2841 -0.0001 21 1 -0.3634 0.5139 0.8899 22 1 -0.3633 0.5137 -0.8901 23 1 -0.3634 -1.0277 0.0005 24 1 0.2129 2.3188 0.0097 25 1 -0.5438 4.0557 0.8905 26 1 -0.5437 4.0563 -0.8895 27 1 -2.8619 5.0153 0.2405 28 1 -2.7884 6.2334 -1.1056 29 1 -3.5208 7.6585 2.5345 30 1 -0.3960 7.3685 1.6633 31 1 -1.1766 5.8151 2.1913 32 1 3.8028 4.6365 0.0007 33 1 5.8973 3.1985 -0.8422 34 1 6.9730 3.2665 1.2893 35 1 7.7572 0.9403 -0.1867 36 1 5.8279 0.0381 0.9893 37 1 4.0202 0.3784 -0.0005 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_11759150_11354860.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:14:11 Heat of formation + Delta-G solvation = -97.905792 kcal Electronic energy + Delta-G solvation = -20265.491788 eV Core-core repulsion = 16976.416749 eV Total energy + Delta-G solvation = -3289.075039 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.124 amu Computer time = 0.46 seconds Orbital eigenvalues (eV) -41.66041 -40.59288 -39.55601 -38.67360 -36.97835 -36.02843 -32.08164 -31.36760 -29.52184 -28.09808 -26.84890 -26.62966 -23.80349 -23.46491 -21.80554 -20.72279 -19.35995 -18.67203 -18.53208 -17.84792 -17.35361 -17.09143 -16.96830 -16.63368 -16.30639 -15.92404 -15.60596 -15.39931 -15.02753 -14.55911 -14.03949 -13.81490 -13.66159 -13.56570 -13.43904 -12.93811 -12.73015 -12.68920 -12.56790 -12.27667 -12.07157 -11.91663 -11.69192 -11.53291 -11.27201 -10.84486 -10.48809 -9.64071 -8.96331 -4.90674 0.21650 0.50785 1.28852 1.63803 1.98383 2.07286 2.22972 2.64052 3.14508 3.34147 3.38487 3.44650 3.67129 3.75594 3.80385 3.87506 4.03721 4.06626 4.12348 4.16141 4.18956 4.21423 4.29913 4.35247 4.42369 4.51665 4.55140 4.65837 4.66818 4.76026 4.87340 5.01113 5.21101 5.25030 5.27556 5.47409 5.57281 6.17490 6.44875 6.49532 6.62315 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.311 6.311 3 C 0.173 3.827 4 C -0.294 4.294 5 C 0.171 3.829 6 O -0.307 6.307 7 C 0.071 3.929 8 C -0.109 4.109 9 H 0.107 0.893 10 C -0.120 4.120 11 C 0.076 3.924 12 H 0.085 0.915 13 O -0.561 6.561 14 C -0.164 4.164 15 C -0.161 4.161 16 C 0.004 3.996 17 C -0.076 4.076 18 O -0.534 6.534 19 Si 0.687 3.313 20 C -0.186 4.186 21 H 0.056 0.944 22 H 0.057 0.943 23 H 0.104 0.896 24 H 0.136 0.864 25 H 0.065 0.935 26 H 0.066 0.934 27 H 0.093 0.907 28 H 0.081 0.919 29 H 0.381 0.619 30 H 0.075 0.925 31 H 0.091 0.909 32 H 0.134 0.866 33 H 0.082 0.918 34 H 0.381 0.619 35 H -0.260 1.260 36 H -0.254 1.254 37 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.381 0.767 -2.637 3.074 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.224 6.224 3 C 0.127 3.873 4 C -0.314 4.314 5 C 0.125 3.875 6 O -0.221 6.221 7 C -0.004 4.004 8 C -0.128 4.128 9 H 0.125 0.875 10 C -0.157 4.157 11 C 0.017 3.983 12 H 0.103 0.897 13 O -0.366 6.366 14 C -0.202 4.202 15 C -0.180 4.180 16 C 0.003 3.997 17 C -0.186 4.186 18 O -0.341 6.341 19 Si 0.588 3.412 20 C -0.204 4.204 21 H 0.074 0.926 22 H 0.076 0.924 23 H 0.123 0.877 24 H 0.154 0.846 25 H 0.083 0.917 26 H 0.084 0.916 27 H 0.111 0.889 28 H 0.100 0.900 29 H 0.229 0.771 30 H 0.093 0.907 31 H 0.109 0.891 32 H 0.152 0.848 33 H 0.099 0.901 34 H 0.229 0.771 35 H -0.185 1.185 36 H -0.178 1.178 37 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -1.529 -0.352 -2.511 2.961 hybrid contribution 0.347 1.291 0.998 1.669 sum -1.182 0.939 -1.512 2.137 Atomic orbital electron populations 1.23125 0.77943 1.04455 1.01441 1.86105 1.21726 1.26426 1.88147 1.18529 0.91592 0.83810 0.93362 1.21310 1.00654 0.91986 1.17417 1.18661 0.90994 0.84508 0.93329 1.86097 1.19028 1.28906 1.88039 1.22835 0.78046 0.97943 1.01610 1.22379 0.95281 0.96010 0.99113 0.87510 1.23059 0.93810 0.99600 0.99247 1.23296 0.86330 0.98258 0.90400 0.89706 1.86516 1.52674 1.53791 1.43662 1.23829 0.97902 1.01697 0.96759 1.20127 0.90016 0.99233 1.08615 1.18696 0.93214 0.91742 0.96000 1.24797 0.94311 1.09967 0.89488 1.86597 1.27338 1.82414 1.37743 0.94820 0.79537 0.76954 0.89935 1.20091 0.91628 0.97683 1.11028 0.92577 0.92432 0.87725 0.84623 0.91694 0.91571 0.88855 0.90039 0.77143 0.90661 0.89095 0.84768 0.90055 0.77081 1.18518 1.17800 0.84537 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 9.81 101.05 0.99 0.96 16 2 O -0.31 -0.72 10.50 -19.42 -0.20 -0.92 16 3 C 0.17 0.50 6.68 -39.24 -0.26 0.23 16 4 C -0.29 -0.62 8.02 -39.29 -0.32 -0.93 16 5 C 0.17 0.52 6.68 -39.24 -0.26 0.26 16 6 O -0.31 -0.78 10.14 -19.40 -0.20 -0.98 16 7 C 0.07 -0.01 4.58 37.16 0.17 0.16 16 8 C -0.11 0.10 4.01 -89.67 -0.36 -0.26 16 9 H 0.11 -0.11 8.14 -51.93 -0.42 -0.54 16 10 C -0.12 0.13 7.47 -25.92 -0.19 -0.06 16 11 C 0.08 -0.06 5.20 -25.92 -0.13 -0.19 16 12 H 0.09 -0.17 8.14 -51.93 -0.42 -0.60 16 13 O -0.56 -0.28 13.67 -35.23 -0.48 -0.77 16 14 C -0.16 0.10 7.48 -25.77 -0.19 -0.09 16 15 C -0.16 -0.52 9.62 -39.40 -0.38 -0.90 16 16 C 0.00 0.01 5.38 -104.67 -0.56 -0.55 16 17 C -0.08 -0.06 2.79 36.00 0.10 0.04 16 18 O -0.53 -0.98 12.81 -35.23 -0.45 -1.44 16 19 Si 0.69 -0.06 29.85 -169.99 -5.07 -5.13 16 20 C -0.19 -0.51 8.60 -39.41 -0.34 -0.85 16 21 H 0.06 -0.10 7.65 -51.93 -0.40 -0.50 16 22 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 23 H 0.10 -0.31 8.14 -51.93 -0.42 -0.73 16 24 H 0.14 0.00 4.54 -52.48 -0.24 -0.24 16 25 H 0.06 -0.03 7.36 -51.93 -0.38 -0.41 16 26 H 0.07 -0.08 7.67 -51.93 -0.40 -0.48 16 27 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 28 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 29 H 0.38 -1.29 9.12 45.56 0.42 -0.88 16 30 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.09 0.01 7.91 -51.93 -0.41 -0.40 16 32 H 0.13 0.37 8.06 -52.49 -0.42 -0.06 16 33 H 0.08 -0.10 7.96 -51.93 -0.41 -0.52 16 34 H 0.38 -0.92 8.74 45.56 0.40 -0.52 16 35 H -0.26 -0.38 7.11 56.52 0.40 0.02 16 36 H -0.25 -0.82 7.05 56.52 0.40 -0.42 16 37 H 0.14 0.21 4.86 -52.48 -0.26 -0.04 16 LS Contribution 307.81 15.07 4.64 4.64 Total: 0.00 -7.43 307.81 -7.75 -15.17 By element: Atomic # 1 Polarization: -4.15 SS G_CDS: -4.24 Total: -8.39 kcal Atomic # 6 Polarization: -0.44 SS G_CDS: -1.74 Total: -2.18 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -1.33 Total: -4.10 kcal Atomic # 14 Polarization: -0.06 SS G_CDS: -5.07 Total: -5.13 kcal Total LS contribution 4.64 Total: 4.64 kcal Total: -7.43 -7.75 -15.17 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_11759150_11354860.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -82.735 kcal (2) G-P(sol) polarization free energy of solvation -7.426 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.160 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.746 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.171 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.906 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.46 seconds