Wall clock time and date at job start Mon Mar 8 2021 08:55:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35894 * 117.00123 * 2 1 4 4 C 1.38612 * 120.02700 * 359.71963 * 3 2 1 5 5 C 1.38660 * 119.88912 * 179.81881 * 4 3 2 6 6 O 1.35899 * 120.02651 * 180.18280 * 5 4 3 7 7 C 1.42901 * 116.99670 * 0.23497 * 6 5 4 8 8 C 1.53008 * 109.46830 * 179.97438 * 7 6 5 9 9 H 1.09002 * 112.84820 * 316.19754 * 8 7 6 10 10 C 1.53775 * 113.61429 * 87.49914 * 8 7 6 11 11 C 1.53783 * 87.08314 * 89.11649 * 10 8 7 12 12 O 1.42900 * 113.69078 * 270.87768 * 11 10 8 13 13 C 1.42899 * 113.99961 * 162.74159 * 12 11 10 14 14 C 1.52998 * 113.61915 * 139.97955 * 11 10 8 15 15 F 1.39905 * 109.46739 * 327.20137 * 14 11 10 16 16 F 1.39901 * 109.46990 * 87.19486 * 14 11 10 17 17 F 1.39896 * 109.47295 * 207.20032 * 14 11 10 18 18 C 1.53774 * 113.61512 * 184.99863 * 8 7 6 19 19 C 1.38749 * 119.94872 * 0.41568 * 5 4 3 20 20 C 1.38201 * 120.05031 * 359.81731 * 19 5 4 21 21 C 1.50701 * 119.94429 * 179.97438 * 20 19 5 22 22 O 1.42907 * 109.47196 * 65.02105 * 21 20 19 23 23 Si 1.86301 * 109.47327 * 185.01854 * 21 20 19 24 24 C 1.38158 * 120.11123 * 359.97438 * 20 19 5 25 25 H 1.08994 * 109.47526 * 300.00493 * 1 2 3 26 26 H 1.09008 * 109.46720 * 60.00483 * 1 2 3 27 27 H 1.09004 * 109.47225 * 179.97438 * 1 2 3 28 28 H 1.08001 * 120.05633 * 0.02562 * 4 3 2 29 29 H 1.08991 * 109.46990 * 299.98994 * 7 6 5 30 30 H 1.09000 * 109.47668 * 60.00030 * 7 6 5 31 31 H 1.09004 * 113.61708 * 203.66785 * 10 8 7 32 32 H 1.09004 * 113.61862 * 334.56844 * 10 8 7 33 33 H 1.09000 * 109.47066 * 64.84061 * 13 12 11 34 34 H 1.09005 * 109.47051 * 184.83639 * 13 12 11 35 35 H 1.08998 * 109.47394 * 304.83836 * 13 12 11 36 36 H 1.09004 * 113.61772 * 25.43009 * 18 8 7 37 37 H 1.08997 * 113.61763 * 156.24934 * 18 8 7 38 38 H 1.07997 * 119.97845 * 179.78975 * 19 5 4 39 39 H 1.08993 * 109.46980 * 305.01849 * 21 20 19 40 40 H 0.96695 * 114.00130 * 59.99525 * 22 21 20 41 41 H 1.48496 * 110.00358 * 180.02562 * 23 21 20 42 42 H 1.48507 * 109.99915 * 301.32239 * 23 21 20 43 43 H 1.08001 * 119.96933 * 179.97438 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 1.2916 2.3737 -0.0059 5 6 1.9241 3.6076 -0.0021 6 8 1.1872 4.7495 -0.0040 7 6 -0.2344 4.6041 -0.0049 8 6 -0.8884 5.9874 -0.0065 9 1 -0.4144 6.6805 0.6886 10 6 -1.0952 6.5694 -1.4147 11 6 -2.4620 5.8644 -1.4199 12 8 -2.4170 4.5284 -1.9249 13 6 -3.5587 3.7395 -1.5841 14 6 -3.5800 6.6994 -2.0474 15 9 -3.3475 8.0555 -1.7938 16 9 -3.6058 6.4811 -3.4290 17 9 -4.8087 6.3253 -1.4930 18 6 -2.4207 5.9444 0.1153 19 6 3.3099 3.6756 -0.0011 20 6 4.0598 2.5148 -0.0001 21 6 5.5648 2.5914 0.0003 22 8 6.0112 3.1847 1.2214 23 14 6.2742 0.8755 -0.1520 24 6 3.4319 1.2841 0.0004 25 1 -0.3634 0.5139 0.8899 26 1 -0.3633 0.5138 -0.8901 27 1 -0.3634 -1.0277 -0.0005 28 1 0.2130 2.3187 -0.0100 29 1 -0.5429 4.0551 -0.8944 30 1 -0.5443 4.0571 0.8855 31 1 -1.1648 7.6571 -1.4319 32 1 -0.3988 6.1772 -2.1560 33 1 -4.4451 4.1585 -2.0603 34 1 -3.4098 2.7165 -1.9298 35 1 -3.6920 3.7416 -0.5023 36 1 -2.7946 5.0475 0.6093 37 1 -2.8527 6.8606 0.5179 38 1 3.8030 4.6365 -0.0016 39 1 5.8979 3.1983 -0.8415 40 1 5.7501 2.6966 2.0143 41 1 7.7578 0.9373 -0.1521 42 1 5.8016 0.0289 0.9729 43 1 4.0202 0.3783 0.0008 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_11759150_17321602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:55:30 Heat of formation + Delta-G solvation = -233.441878 kcal Electronic energy + Delta-G solvation = -32240.694041 eV Core-core repulsion = 27226.304552 eV Total energy + Delta-G solvation = -5014.389490 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.127 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -51.21886 -48.76602 -48.65154 -41.96685 -41.34961 -39.77312 -38.86624 -37.36955 -36.72264 -32.06393 -31.57845 -30.37829 -28.67336 -28.32664 -27.25949 -26.95940 -26.57093 -23.60794 -23.51990 -22.16397 -20.74214 -19.95769 -19.62030 -19.49390 -19.28385 -18.00913 -17.84400 -17.46611 -17.26093 -17.06000 -16.86969 -16.66169 -16.60298 -16.10432 -15.99775 -15.75979 -15.58569 -15.55007 -15.52536 -15.14258 -14.95278 -14.84334 -14.74242 -14.36659 -14.22239 -14.14422 -13.90201 -13.46677 -13.32990 -13.27015 -12.99647 -12.82463 -12.65598 -12.48736 -12.23630 -12.15117 -12.01760 -11.79268 -11.66057 -11.55157 -10.96159 -10.60873 -9.71129 -9.02793 -4.89959 0.16209 0.44314 1.29278 1.49080 1.65619 1.87151 1.92859 2.02890 2.17832 2.46714 2.56101 2.61517 2.78675 3.15101 3.28139 3.35854 3.41943 3.52808 3.65573 3.80362 3.93907 4.00942 4.02856 4.04439 4.09408 4.09913 4.15550 4.17435 4.24539 4.27315 4.35236 4.39992 4.43229 4.48050 4.50985 4.55685 4.64538 4.70483 4.83684 5.15994 5.21879 5.39153 5.51371 5.52818 6.10965 6.41059 6.43884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.311 6.311 3 C 0.172 3.828 4 C -0.292 4.292 5 C 0.173 3.827 6 O -0.307 6.307 7 C 0.069 3.931 8 C -0.099 4.099 9 H 0.107 0.893 10 C -0.112 4.112 11 C 0.039 3.961 12 O -0.332 6.332 13 C 0.009 3.991 14 C 0.437 3.563 15 F -0.174 7.174 16 F -0.174 7.174 17 F -0.182 7.182 18 C -0.143 4.143 19 C -0.161 4.161 20 C -0.041 4.041 21 C -0.074 4.074 22 O -0.526 6.526 23 Si 0.689 3.311 24 C -0.189 4.189 25 H 0.055 0.945 26 H 0.057 0.943 27 H 0.104 0.896 28 H 0.136 0.864 29 H 0.084 0.916 30 H 0.065 0.935 31 H 0.118 0.882 32 H 0.100 0.900 33 H 0.055 0.945 34 H 0.101 0.899 35 H 0.055 0.945 36 H 0.094 0.906 37 H 0.114 0.886 38 H 0.136 0.864 39 H 0.123 0.877 40 H 0.377 0.623 41 H -0.256 1.256 42 H -0.259 1.259 43 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.998 -2.188 0.687 3.774 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.224 6.224 3 C 0.126 3.874 4 C -0.312 4.312 5 C 0.127 3.873 6 O -0.220 6.220 7 C -0.006 4.006 8 C -0.117 4.117 9 H 0.126 0.874 10 C -0.149 4.149 11 C -0.004 4.004 12 O -0.250 6.250 13 C -0.087 4.087 14 C 0.382 3.618 15 F -0.156 7.156 16 F -0.155 7.155 17 F -0.163 7.163 18 C -0.180 4.180 19 C -0.180 4.180 20 C -0.041 4.041 21 C -0.184 4.184 22 O -0.333 6.333 23 Si 0.590 3.410 24 C -0.208 4.208 25 H 0.074 0.926 26 H 0.076 0.924 27 H 0.122 0.878 28 H 0.153 0.847 29 H 0.102 0.898 30 H 0.083 0.917 31 H 0.136 0.864 32 H 0.118 0.882 33 H 0.073 0.927 34 H 0.120 0.880 35 H 0.074 0.926 36 H 0.112 0.888 37 H 0.132 0.868 38 H 0.154 0.846 39 H 0.141 0.859 40 H 0.225 0.775 41 H -0.181 1.181 42 H -0.184 1.184 43 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -2.003 -2.425 0.514 3.187 hybrid contribution -1.452 0.545 1.071 1.884 sum -3.455 -1.880 1.585 4.240 Atomic orbital electron populations 1.23120 0.78003 1.04421 1.01405 1.86109 1.21702 1.26492 1.88122 1.18589 0.91696 0.83784 0.93297 1.21313 1.00655 0.91992 1.17221 1.18666 0.90986 0.84379 0.93281 1.86059 1.18826 1.29001 1.88085 1.22751 0.78179 0.96957 1.02672 1.22074 0.94563 0.96753 0.98329 0.87431 1.23270 0.91996 1.01242 0.98346 1.24050 0.95204 0.85555 0.95558 1.88086 1.42245 1.19093 1.75593 1.23151 0.88447 0.96278 1.00793 1.21155 0.83581 0.79618 0.77397 1.93186 1.94299 1.34168 1.93908 1.93225 1.96606 1.94457 1.31196 1.93192 1.46873 1.90999 1.85264 1.23600 0.96363 1.05524 0.92545 1.20162 0.89942 0.99357 1.08562 1.19802 0.95929 0.91718 0.96683 1.25057 0.91586 1.11541 0.90216 1.86617 1.78472 1.52933 1.15242 0.94733 0.80092 0.75502 0.90636 1.20185 0.91626 0.97861 1.11094 0.92649 0.92389 0.87773 0.84657 0.89765 0.91659 0.86424 0.88169 0.92681 0.88016 0.92638 0.88775 0.86812 0.84588 0.85909 0.77544 1.18103 1.18365 0.84561 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.06 9.81 101.05 0.99 0.93 16 2 O -0.31 -0.40 10.50 -19.41 -0.20 -0.60 16 3 C 0.17 0.28 6.68 -39.24 -0.26 0.02 16 4 C -0.29 -0.26 8.02 -39.29 -0.32 -0.57 16 5 C 0.17 0.30 6.68 -39.24 -0.26 0.04 16 6 O -0.31 -0.39 10.14 -19.42 -0.20 -0.59 16 7 C 0.07 -0.09 4.32 37.16 0.16 0.07 16 8 C -0.10 0.23 4.20 -89.81 -0.38 -0.15 16 9 H 0.11 -0.29 8.14 -51.93 -0.42 -0.71 16 10 C -0.11 0.19 6.89 -25.92 -0.18 0.01 16 11 C 0.04 -0.05 0.84 -89.80 -0.08 -0.12 16 12 O -0.33 0.25 8.37 -35.23 -0.29 -0.05 16 13 C 0.01 -0.02 10.30 101.05 1.04 1.02 16 14 C 0.44 0.23 2.52 37.16 0.09 0.33 16 15 F -0.17 -0.13 15.81 2.25 0.04 -0.09 16 16 F -0.17 -0.41 17.10 2.25 0.04 -0.37 16 17 F -0.18 -0.14 15.39 2.25 0.03 -0.11 16 18 C -0.14 0.44 6.51 -25.92 -0.17 0.27 16 19 C -0.16 -0.29 9.62 -39.41 -0.38 -0.67 16 20 C -0.04 -0.04 5.35 -104.66 -0.56 -0.60 16 21 C -0.07 -0.01 2.80 36.01 0.10 0.09 16 22 O -0.53 -0.77 12.83 -35.23 -0.45 -1.23 16 23 Si 0.69 -0.31 29.88 -169.99 -5.08 -5.39 16 24 C -0.19 -0.24 8.61 -39.41 -0.34 -0.58 16 25 H 0.05 -0.17 7.67 -51.93 -0.40 -0.57 16 26 H 0.06 -0.18 7.65 -51.92 -0.40 -0.57 16 27 H 0.10 -0.40 8.14 -51.93 -0.42 -0.82 16 28 H 0.14 -0.15 4.54 -52.49 -0.24 -0.38 16 29 H 0.08 -0.09 5.63 -51.93 -0.29 -0.39 16 30 H 0.07 -0.15 7.67 -51.93 -0.40 -0.55 16 31 H 0.12 -0.30 7.02 -51.93 -0.36 -0.66 16 32 H 0.10 -0.10 8.10 -51.93 -0.42 -0.52 16 33 H 0.05 -0.10 6.69 -51.93 -0.35 -0.44 16 34 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.06 -0.22 6.55 -51.93 -0.34 -0.56 16 36 H 0.09 -0.38 6.63 -51.93 -0.34 -0.73 16 37 H 0.11 -0.43 8.05 -51.93 -0.42 -0.84 16 38 H 0.14 0.23 8.06 -52.49 -0.42 -0.20 16 39 H 0.12 -0.10 7.96 -51.93 -0.41 -0.51 16 40 H 0.38 -0.50 8.70 45.56 0.40 -0.10 16 41 H -0.26 -0.65 7.11 56.52 0.40 -0.25 16 42 H -0.26 -0.41 7.01 56.52 0.40 -0.02 16 43 H 0.14 0.03 4.83 -52.49 -0.25 -0.23 16 LS Contribution 357.46 15.07 5.39 5.39 Total: 0.00 -6.46 357.46 -6.39 -12.84 By element: Atomic # 1 Polarization: -4.77 SS G_CDS: -5.12 Total: -9.89 kcal Atomic # 6 Polarization: 0.62 SS G_CDS: -0.53 Total: 0.09 kcal Atomic # 8 Polarization: -1.32 SS G_CDS: -1.15 Total: -2.46 kcal Atomic # 9 Polarization: -0.68 SS G_CDS: 0.11 Total: -0.57 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.08 Total: -5.39 kcal Total LS contribution 5.39 Total: 5.39 kcal Total: -6.46 -6.39 -12.84 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_11759150_17321602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -220.602 kcal (2) G-P(sol) polarization free energy of solvation -6.455 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.057 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.385 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -12.840 kcal (6) G-S(sol) free energy of system = (1) + (5) -233.442 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds