Wall clock time and date at job start Mon Mar 8 2021 07:12:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86299 * 109.46988 * 2 1 4 4 C 1.50702 * 109.47245 * 239.99806 * 2 1 3 5 5 C 1.38254 * 119.98388 * 104.99828 * 4 2 1 6 6 C 1.38256 * 120.12494 * 180.02562 * 5 4 2 7 7 C 1.38183 * 120.09508 * 359.96213 * 6 5 4 8 8 C 1.38657 * 119.96997 * 0.02562 * 7 6 5 9 9 O 1.35957 * 120.06177 * 179.97438 * 8 7 6 10 10 C 1.42898 * 117.00223 * 0.02562 * 9 8 7 11 11 C 1.52995 * 109.47243 * 179.97438 * 10 9 8 12 12 H 1.08999 * 112.84933 * 316.19925 * 11 10 9 13 13 C 1.53781 * 113.69221 * 87.46495 * 11 10 9 14 14 C 1.54049 * 87.08031 * 139.98770 * 13 11 10 15 15 H 1.09000 * 113.61076 * 89.06984 * 14 13 11 16 16 O 1.42891 * 113.69771 * 220.05337 * 14 13 11 17 17 C 1.53781 * 113.61503 * 185.00084 * 11 10 9 18 18 C 1.38335 * 119.98255 * 285.25308 * 4 2 1 19 19 F 1.35101 * 120.04913 * 359.97438 * 18 4 2 20 20 H 0.96691 * 114.00116 * 60.00419 * 1 2 3 21 21 H 1.09003 * 109.47394 * 119.99439 * 2 1 3 22 22 H 1.48503 * 109.99888 * 298.67837 * 3 2 1 23 23 H 1.48497 * 110.00319 * 59.99866 * 3 2 1 24 24 H 1.07995 * 119.93693 * 0.02562 * 5 4 2 25 25 H 1.07999 * 119.95577 * 179.97438 * 6 5 4 26 26 H 1.07999 * 120.01589 * 179.97438 * 7 6 5 27 27 H 1.09000 * 109.47276 * 59.99726 * 10 9 8 28 28 H 1.09001 * 109.46942 * 300.00101 * 10 9 8 29 29 H 1.09005 * 113.61471 * 254.54353 * 13 11 10 30 30 H 1.08996 * 113.61178 * 25.35695 * 13 11 10 31 31 H 0.96702 * 114.00033 * 277.42089 * 16 14 13 32 32 H 1.09002 * 113.61445 * 334.48413 * 17 11 10 33 33 H 1.09002 * 113.61408 * 105.30144 * 17 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 2.4539 0.0172 -2.2835 6 6 2.9151 -0.6315 -3.4139 7 6 2.8560 -2.0098 -3.4945 8 6 2.3330 -2.7435 -2.4406 9 8 2.2735 -4.0995 -2.5182 10 6 2.7682 -4.7033 -3.7151 11 6 2.6201 -6.2230 -3.6187 12 1 2.9212 -6.6168 -2.6480 13 6 1.2540 -6.7422 -4.0973 14 6 2.0153 -7.9123 -4.7487 15 1 2.1514 -8.7672 -4.0863 16 8 1.5124 -8.2796 -6.0348 17 6 3.2358 -6.9786 -4.8081 18 6 1.8646 -2.0900 -1.3078 19 9 1.3498 -2.8011 -0.2809 20 1 -0.3933 0.4416 -0.7650 21 1 1.7924 -0.5137 0.8900 22 1 1.5879 2.4585 -1.2243 23 1 1.5615 2.4679 1.2084 24 1 2.5018 1.0944 -2.2229 25 1 3.3224 -0.0604 -4.2351 26 1 3.2163 -2.5152 -4.3783 27 1 3.8204 -4.4485 -3.8425 28 1 2.1995 -4.3358 -4.5693 29 1 0.5943 -7.0484 -3.2853 30 1 0.7641 -6.0846 -4.8153 31 1 0.7447 -8.8668 -6.0039 32 1 3.2884 -6.3864 -5.7216 33 1 4.1769 -7.4745 -4.5703 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_11948474_11354860.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:12:41 Heat of formation + Delta-G solvation = -106.593965 kcal Electronic energy + Delta-G solvation = -18740.489506 eV Core-core repulsion = 15455.803555 eV Total energy + Delta-G solvation = -3284.685951 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 255.099 amu Computer time = 0.27 seconds Orbital eigenvalues (eV) -49.66528 -41.34864 -40.32924 -39.05074 -37.41986 -36.07589 -32.45019 -31.42581 -29.20931 -26.98721 -26.84334 -24.00735 -23.76531 -22.25879 -20.72844 -19.37612 -18.72790 -18.36898 -18.04534 -17.46873 -17.26200 -16.62549 -16.24889 -16.00150 -15.82203 -15.71400 -15.65817 -14.81179 -14.43897 -14.29357 -13.89474 -13.56385 -13.38490 -13.18391 -12.95075 -12.65965 -12.43450 -12.38929 -11.99361 -11.82799 -11.71861 -11.34557 -10.84576 -10.67218 -9.97645 -9.27209 -5.00543 -0.05738 0.14467 1.18743 1.52510 1.84561 1.97494 2.40051 3.10040 3.21416 3.31653 3.33777 3.44174 3.48176 3.65132 3.73363 3.80835 3.93702 3.99824 4.10392 4.14090 4.21358 4.28561 4.52651 4.59582 4.65324 4.67234 4.84824 4.87131 4.93369 5.00478 5.04223 5.22379 5.24355 5.51943 6.22115 6.36909 6.62222 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.078 4.078 3 Si 0.703 3.297 4 C -0.116 4.116 5 C -0.134 4.134 6 C -0.082 4.082 7 C -0.178 4.178 8 C 0.100 3.900 9 O -0.304 6.304 10 C 0.070 3.930 11 C -0.110 4.110 12 H 0.107 0.893 13 C -0.164 4.164 14 C 0.076 3.924 15 H 0.086 0.914 16 O -0.560 6.560 17 C -0.119 4.119 18 C 0.094 3.906 19 F -0.124 7.124 20 H 0.376 0.624 21 H 0.120 0.880 22 H -0.257 1.257 23 H -0.254 1.254 24 H 0.139 0.861 25 H 0.138 0.862 26 H 0.140 0.860 27 H 0.069 0.931 28 H 0.068 0.932 29 H 0.074 0.926 30 H 0.091 0.909 31 H 0.381 0.619 32 H 0.094 0.906 33 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.202 0.470 -2.743 4.242 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.187 4.187 3 Si 0.603 3.397 4 C -0.117 4.117 5 C -0.152 4.152 6 C -0.100 4.100 7 C -0.197 4.197 8 C 0.053 3.947 9 O -0.218 6.218 10 C -0.005 4.005 11 C -0.128 4.128 12 H 0.125 0.875 13 C -0.202 4.202 14 C 0.017 3.983 15 H 0.103 0.897 16 O -0.366 6.366 17 C -0.157 4.157 18 C 0.074 3.926 19 F -0.102 7.102 20 H 0.223 0.777 21 H 0.138 0.862 22 H -0.182 1.182 23 H -0.179 1.179 24 H 0.157 0.843 25 H 0.155 0.845 26 H 0.157 0.843 27 H 0.087 0.913 28 H 0.086 0.914 29 H 0.093 0.907 30 H 0.109 0.891 31 H 0.229 0.771 32 H 0.112 0.888 33 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 3.475 1.186 -2.204 4.282 hybrid contribution -1.520 -0.719 -0.379 1.723 sum 1.955 0.467 -2.583 3.273 Atomic orbital electron populations 1.86667 1.17207 1.79959 1.49089 1.25083 0.84344 1.11593 0.97710 0.94732 0.91330 0.73388 0.80229 1.20226 1.01709 0.91540 0.98246 1.20981 1.00669 1.00376 0.93180 1.20986 0.97686 0.93511 0.97850 1.21248 1.04567 0.95176 0.98735 1.19023 0.98073 0.83564 0.94031 1.86152 1.79066 1.15916 1.40641 1.22901 0.99136 0.92741 0.85678 1.22326 0.98241 0.92185 1.00080 0.87507 1.23828 0.96616 0.98842 1.00898 1.23330 0.94990 0.95051 0.84923 0.89659 1.86514 1.51042 1.70578 1.28438 1.23063 0.97468 0.97110 0.98020 1.16756 1.02297 0.88536 0.85038 1.91528 1.84374 1.77972 1.56356 0.77692 0.86216 1.18207 1.17928 0.84325 0.84463 0.84255 0.91272 0.91409 0.90698 0.89085 0.77132 0.88782 0.90032 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -1.27 12.88 -35.23 -0.45 -1.72 16 2 C -0.08 -0.06 2.45 36.01 0.09 0.02 16 3 Si 0.70 -0.84 30.24 -169.99 -5.14 -5.98 16 4 C -0.12 -0.14 5.26 -104.58 -0.55 -0.69 16 5 C -0.13 0.10 8.66 -39.57 -0.34 -0.25 16 6 C -0.08 0.10 10.04 -39.59 -0.40 -0.30 16 7 C -0.18 0.04 9.04 -39.45 -0.36 -0.32 16 8 C 0.10 0.23 6.69 -39.18 -0.26 -0.03 16 9 O -0.30 -0.80 10.00 -19.61 -0.20 -0.99 16 10 C 0.07 -0.04 4.58 37.16 0.17 0.13 16 11 C -0.11 0.10 4.01 -89.81 -0.36 -0.26 16 12 H 0.11 -0.08 8.14 -51.93 -0.42 -0.51 16 13 C -0.16 0.09 7.48 -25.78 -0.19 -0.10 16 14 C 0.08 -0.06 5.23 -25.77 -0.13 -0.19 16 15 H 0.09 -0.17 8.14 -51.93 -0.42 -0.59 16 16 O -0.56 -0.25 13.67 -35.23 -0.48 -0.73 16 17 C -0.12 0.15 7.46 -25.92 -0.19 -0.05 16 18 C 0.09 0.31 7.25 -39.30 -0.29 0.03 16 19 F -0.12 -0.70 16.60 2.25 0.04 -0.66 16 20 H 0.38 -0.36 8.70 45.56 0.40 0.03 16 21 H 0.12 0.10 7.91 -51.93 -0.41 -0.31 16 22 H -0.26 0.02 6.68 56.52 0.38 0.40 16 23 H -0.25 -0.54 7.11 56.52 0.40 -0.13 16 24 H 0.14 -0.34 4.85 -52.49 -0.25 -0.60 16 25 H 0.14 -0.51 8.06 -52.49 -0.42 -0.93 16 26 H 0.14 -0.32 6.30 -52.49 -0.33 -0.65 16 27 H 0.07 -0.13 7.66 -51.93 -0.40 -0.53 16 28 H 0.07 -0.09 7.37 -51.93 -0.38 -0.47 16 29 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.09 0.00 7.90 -51.93 -0.41 -0.41 16 31 H 0.38 -1.31 9.12 45.56 0.42 -0.90 16 32 H 0.09 -0.09 8.10 -51.93 -0.42 -0.51 16 33 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 LS Contribution 283.88 15.07 4.28 4.28 Total: 0.00 -7.05 283.88 -7.90 -14.96 By element: Atomic # 1 Polarization: -4.02 SS G_CDS: -3.13 Total: -7.16 kcal Atomic # 6 Polarization: 0.82 SS G_CDS: -2.82 Total: -2.00 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -1.13 Total: -3.45 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 0.04 Total: -0.66 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.14 Total: -5.98 kcal Total LS contribution 4.28 Total: 4.28 kcal Total: -7.05 -7.90 -14.96 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_11948474_11354860.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.639 kcal (2) G-P(sol) polarization free energy of solvation -7.051 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -98.689 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.905 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.955 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.594 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.27 seconds