Wall clock time and date at job start Mon Mar 8 2021 08:52:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52995 * 109.47396 * 2 1 4 4 C 1.53003 * 109.47101 * 240.00008 * 2 1 3 5 5 O 1.42901 * 109.47304 * 120.00383 * 2 1 3 6 6 C 1.42897 * 114.00281 * 59.99623 * 5 2 1 7 7 H 1.09003 * 112.85039 * 18.80515 * 6 5 2 8 8 C 1.53777 * 113.61706 * 150.00238 * 6 5 2 9 9 C 1.53776 * 87.08411 * 140.06769 * 8 6 5 10 10 H 1.09001 * 113.61982 * 89.19989 * 9 8 6 11 11 C 1.53005 * 113.61375 * 220.02188 * 9 8 6 12 12 O 1.42904 * 109.46880 * 183.46651 * 11 9 8 13 13 C 1.35953 * 116.99709 * 179.97438 * 12 11 9 14 14 C 1.38910 * 120.06416 * 180.29744 * 13 12 11 15 15 F 1.35103 * 120.04799 * 359.97438 * 14 13 12 16 16 C 1.38333 * 119.90591 * 180.25302 * 14 13 12 17 17 C 1.50706 * 119.98236 * 179.72569 * 16 14 13 18 18 O 1.42895 * 109.46938 * 284.72241 * 17 16 14 19 19 Si 1.86299 * 109.46748 * 164.72406 * 17 16 14 20 20 C 1.38252 * 120.02794 * 359.45219 * 16 14 13 21 21 C 1.38260 * 120.13046 * 0.27211 * 20 16 14 22 22 C 1.38181 * 120.09174 * 0.02562 * 21 20 16 23 23 C 1.53779 * 87.17365 * 334.60761 * 9 8 6 24 24 H 1.09004 * 109.46865 * 299.99477 * 1 2 3 25 25 H 1.08998 * 109.47587 * 59.99756 * 1 2 3 26 26 H 1.09002 * 109.47566 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47358 * 179.97438 * 3 2 1 28 28 H 1.09001 * 109.47295 * 300.00246 * 3 2 1 29 29 H 1.09000 * 109.47154 * 60.00573 * 3 2 1 30 30 H 1.09002 * 109.46714 * 300.00280 * 4 2 1 31 31 H 1.08998 * 109.46708 * 59.99697 * 4 2 1 32 32 H 1.09000 * 109.47090 * 180.02562 * 4 2 1 33 33 H 1.09003 * 113.61404 * 25.51641 * 8 6 5 34 34 H 1.09004 * 113.61529 * 254.61347 * 8 6 5 35 35 H 1.08997 * 109.47410 * 63.46804 * 11 9 8 36 36 H 1.08994 * 109.47003 * 303.46633 * 11 9 8 37 37 H 1.09000 * 109.47161 * 44.72507 * 17 16 14 38 38 H 0.96709 * 113.99981 * 180.02562 * 18 17 16 39 39 H 1.48498 * 110.00336 * 298.68292 * 19 17 16 40 40 H 1.48504 * 109.99873 * 60.00145 * 19 17 16 41 41 H 1.08004 * 119.93662 * 180.25375 * 20 16 14 42 42 H 1.07999 * 119.95327 * 179.97438 * 21 20 16 43 43 H 1.07998 * 120.01768 * 179.97438 * 22 21 20 44 44 H 1.09002 * 113.62044 * 139.93601 * 23 9 8 45 45 H 1.09000 * 113.62061 * 270.84554 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5847 -2.0356 1.2645 7 1 1.2522 -2.4452 0.3106 8 6 2.5836 -2.9379 2.0077 9 6 1.3666 -3.6135 2.6614 10 1 0.9754 -4.4555 2.0902 11 6 1.5701 -3.9431 4.1416 12 8 0.4233 -4.6369 4.6371 13 6 0.4428 -5.0059 5.9454 14 6 -0.6361 -5.6891 6.4920 15 9 -1.7070 -5.9876 5.7242 16 6 -0.6151 -6.0583 7.8249 17 6 -1.7874 -6.7941 8.4212 18 8 -2.8664 -5.8810 8.6304 19 14 -1.2852 -7.5457 10.0502 20 6 0.4832 -5.7575 8.6089 21 6 1.5603 -5.0826 8.0649 22 6 1.5422 -4.7059 6.7355 23 6 0.6045 -2.2995 2.4220 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 0.0005 27 1 3.1300 1.4424 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6768 1.9562 0.8900 30 1 1.6765 -1.7489 -1.2492 31 1 1.6766 -0.2074 -2.1392 32 1 3.1300 -0.7217 -1.2490 33 1 3.2161 -2.4001 2.7140 34 1 3.1486 -3.5984 1.3499 35 1 1.7070 -3.0195 4.7040 36 1 2.4528 -4.5722 4.2557 37 1 -2.1059 -7.5830 7.7398 38 1 -3.6564 -6.2867 9.0134 39 1 -0.1849 -8.5209 9.8420 40 1 -0.8489 -6.4803 10.9881 41 1 0.4998 -6.0501 9.6484 42 1 2.4166 -4.8487 8.6800 43 1 2.3840 -4.1784 6.3119 44 1 -0.4260 -2.4451 2.0981 45 1 0.6948 -1.5867 3.2417 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_11948474_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:32 Heat of formation + Delta-G solvation = -109.100002 kcal Electronic energy + Delta-G solvation = -25951.135200 eV Core-core repulsion = 22044.190103 eV Total energy + Delta-G solvation = -3906.945097 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.162 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -49.66045 -41.38839 -40.70520 -39.22271 -38.15905 -37.27140 -33.92907 -32.54931 -31.41535 -29.32593 -28.41909 -28.31132 -26.92289 -26.68150 -24.05709 -23.74221 -22.22491 -20.84703 -20.69282 -19.09401 -18.51084 -18.30289 -18.05934 -17.60976 -17.20692 -16.61084 -16.29776 -16.18130 -15.97320 -15.69265 -15.53305 -15.31135 -14.95480 -14.58400 -14.41179 -14.11981 -13.84848 -13.55544 -13.49496 -13.44827 -13.34723 -13.16584 -13.02453 -12.87042 -12.73020 -12.62555 -12.55255 -12.25190 -12.07471 -11.95381 -11.84813 -11.73609 -11.41273 -11.23492 -10.37441 -10.36090 -9.95573 -9.25661 -5.01817 -0.04679 0.15076 1.19556 1.60611 1.88566 1.94520 2.39202 2.69724 3.18770 3.27758 3.40459 3.49068 3.63161 3.71148 3.74365 3.78698 3.86096 3.93352 3.97629 4.01380 4.05101 4.07690 4.10992 4.17032 4.28292 4.45085 4.54005 4.55024 4.62128 4.70148 4.73148 4.74308 4.78458 4.85043 4.86101 4.89128 4.93606 4.97619 5.03380 5.07536 5.11546 5.22476 5.26222 5.28356 5.33408 5.51786 6.23847 6.38661 6.60294 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.179 4.179 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.126 4.126 9 C -0.110 4.110 10 H 0.105 0.895 11 C 0.070 3.930 12 O -0.303 6.303 13 C 0.102 3.898 14 C 0.095 3.905 15 F -0.123 7.123 16 C -0.073 4.073 17 C -0.076 4.076 18 O -0.542 6.542 19 Si 0.697 3.303 20 C -0.135 4.135 21 C -0.082 4.082 22 C -0.178 4.178 23 C -0.148 4.148 24 H 0.064 0.936 25 H 0.066 0.934 26 H 0.058 0.942 27 H 0.063 0.937 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.059 0.941 31 H 0.068 0.932 32 H 0.065 0.935 33 H 0.094 0.906 34 H 0.078 0.922 35 H 0.069 0.931 36 H 0.068 0.932 37 H 0.076 0.924 38 H 0.384 0.616 39 H -0.252 1.252 40 H -0.247 1.247 41 H 0.132 0.868 42 H 0.138 0.862 43 H 0.142 0.858 44 H 0.073 0.927 45 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.714 -1.269 0.287 1.484 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.236 4.236 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.163 4.163 9 C -0.129 4.129 10 H 0.123 0.877 11 C -0.005 4.005 12 O -0.216 6.216 13 C 0.056 3.944 14 C 0.075 3.925 15 F -0.102 7.102 16 C -0.074 4.074 17 C -0.185 4.185 18 O -0.348 6.348 19 Si 0.597 3.403 20 C -0.153 4.153 21 C -0.100 4.100 22 C -0.197 4.197 23 C -0.186 4.186 24 H 0.083 0.917 25 H 0.085 0.915 26 H 0.077 0.923 27 H 0.082 0.918 28 H 0.090 0.910 29 H 0.082 0.918 30 H 0.078 0.922 31 H 0.087 0.913 32 H 0.084 0.916 33 H 0.112 0.888 34 H 0.097 0.903 35 H 0.087 0.913 36 H 0.086 0.914 37 H 0.094 0.906 38 H 0.232 0.768 39 H -0.177 1.177 40 H -0.172 1.172 41 H 0.150 0.850 42 H 0.156 0.844 43 H 0.160 0.840 44 H 0.092 0.908 45 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 1.725 -0.903 0.548 2.022 hybrid contribution -0.031 0.101 -0.852 0.859 sum 1.694 -0.803 -0.305 1.899 Atomic orbital electron populations 1.22473 0.95429 1.02570 1.02946 1.21544 0.93275 0.93270 0.85341 1.21769 1.01987 0.93213 1.02644 1.22473 1.02307 1.00868 0.98002 1.88029 1.73784 1.23277 1.42984 1.23595 0.95517 0.82826 0.97616 0.88960 1.23222 0.96290 0.97302 0.99510 1.22322 0.98697 0.98242 0.93597 0.87690 1.22914 0.86984 0.96038 0.94522 1.86151 1.42463 1.71674 1.21349 1.18976 0.94043 0.96639 0.84757 1.16697 0.84353 1.02692 0.88802 1.91515 1.52977 1.91135 1.74532 1.19245 0.96182 1.00464 0.91505 1.24683 0.88820 0.95072 1.09971 1.86513 1.25139 1.36676 1.86512 0.95051 0.86393 0.81104 0.77765 1.20805 0.93792 1.01128 0.99548 1.20952 0.98240 0.96325 0.94460 1.21233 0.98271 1.05185 0.95021 1.23649 0.99154 0.96185 0.99589 0.91655 0.91496 0.92268 0.91766 0.91032 0.91759 0.92230 0.91318 0.91601 0.88765 0.90307 0.91322 0.91397 0.90567 0.76796 1.17679 1.17240 0.85030 0.84423 0.84046 0.90816 0.89076 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.02 8.38 37.16 0.31 0.33 16 2 C 0.10 0.05 1.11 -90.62 -0.10 -0.05 16 3 C -0.14 0.01 8.84 37.15 0.33 0.34 16 4 C -0.18 0.09 8.38 37.16 0.31 0.40 16 5 O -0.36 -0.69 10.00 -35.23 -0.35 -1.05 16 6 C 0.06 0.01 2.82 -25.83 -0.07 -0.06 16 7 H 0.09 -0.05 5.54 -51.93 -0.29 -0.34 16 8 C -0.13 0.10 7.47 -25.92 -0.19 -0.10 16 9 C -0.11 0.02 4.00 -89.81 -0.36 -0.34 16 10 H 0.10 -0.02 8.14 -51.93 -0.42 -0.44 16 11 C 0.07 0.02 4.57 37.16 0.17 0.19 16 12 O -0.30 -1.09 10.00 -19.59 -0.20 -1.28 16 13 C 0.10 0.38 6.69 -39.17 -0.26 0.12 16 14 C 0.09 0.47 7.25 -39.30 -0.29 0.19 16 15 F -0.12 -0.78 16.59 2.25 0.04 -0.75 16 16 C -0.07 -0.27 5.30 -104.58 -0.55 -0.82 16 17 C -0.08 -0.10 2.44 36.01 0.09 -0.01 16 18 O -0.54 -0.90 12.86 -35.23 -0.45 -1.36 16 19 Si 0.70 -0.66 30.20 -169.99 -5.13 -5.80 16 20 C -0.13 -0.32 8.66 -39.57 -0.34 -0.66 16 21 C -0.08 -0.09 10.04 -39.59 -0.40 -0.48 16 22 C -0.18 -0.25 9.04 -39.44 -0.36 -0.61 16 23 C -0.15 -0.07 7.48 -25.82 -0.19 -0.27 16 24 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 25 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 26 H 0.06 -0.01 7.02 -51.93 -0.36 -0.37 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 29 H 0.06 0.02 8.14 -51.93 -0.42 -0.40 16 30 H 0.06 -0.05 6.24 -51.93 -0.32 -0.37 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.43 16 33 H 0.09 -0.06 8.10 -51.93 -0.42 -0.48 16 34 H 0.08 -0.12 8.14 -51.93 -0.42 -0.55 16 35 H 0.07 -0.03 7.40 -51.93 -0.38 -0.41 16 36 H 0.07 -0.07 7.66 -51.93 -0.40 -0.47 16 37 H 0.08 0.03 7.89 -51.93 -0.41 -0.38 16 38 H 0.38 -1.43 8.74 45.56 0.40 -1.03 16 39 H -0.25 -0.34 7.11 56.52 0.40 0.06 16 40 H -0.25 -0.36 6.75 56.52 0.38 0.02 16 41 H 0.13 0.17 4.89 -52.48 -0.26 -0.08 16 42 H 0.14 -0.22 8.06 -52.49 -0.42 -0.65 16 43 H 0.14 -0.15 6.30 -52.49 -0.33 -0.48 16 44 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 45 H 0.09 0.11 7.92 -51.93 -0.41 -0.30 16 LS Contribution 363.17 15.07 5.47 5.47 Total: 0.00 -6.79 363.17 -9.59 -16.38 By element: Atomic # 1 Polarization: -2.73 SS G_CDS: -7.06 Total: -9.79 kcal Atomic # 6 Polarization: 0.07 SS G_CDS: -1.91 Total: -1.84 kcal Atomic # 8 Polarization: -2.68 SS G_CDS: -1.00 Total: -3.68 kcal Atomic # 9 Polarization: -0.78 SS G_CDS: 0.04 Total: -0.75 kcal Atomic # 14 Polarization: -0.66 SS G_CDS: -5.13 Total: -5.80 kcal Total LS contribution 5.47 Total: 5.47 kcal Total: -6.79 -9.59 -16.38 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_11948474_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -92.718 kcal (2) G-P(sol) polarization free energy of solvation -6.792 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.510 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.100 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds