Wall clock time and date at job start Mon Mar 8 2021 08:52:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52996 * 1 3 3 C 1.52995 * 109.47396 * 2 1 4 4 C 1.53003 * 109.47101 * 240.00008 * 2 1 3 5 5 O 1.42901 * 109.47304 * 120.00383 * 2 1 3 6 6 C 1.42897 * 114.00281 * 59.99623 * 5 2 1 7 7 H 1.09003 * 112.85039 * 18.80515 * 6 5 2 8 8 C 1.53777 * 113.61706 * 150.00238 * 6 5 2 9 9 C 1.53776 * 87.08411 * 140.06769 * 8 6 5 10 10 H 1.09001 * 113.61982 * 89.19989 * 9 8 6 11 11 C 1.53005 * 113.61375 * 220.02188 * 9 8 6 12 12 O 1.42904 * 109.46880 * 183.46651 * 11 9 8 13 13 C 1.35953 * 116.99709 * 179.97438 * 12 11 9 14 14 C 1.38910 * 120.06416 * 180.29744 * 13 12 11 15 15 F 1.35103 * 120.04799 * 359.97438 * 14 13 12 16 16 C 1.38333 * 119.90591 * 180.25302 * 14 13 12 17 17 C 1.50706 * 119.98236 * 179.72569 * 16 14 13 18 18 O 1.42895 * 109.46938 * 284.72241 * 17 16 14 19 19 Si 1.86299 * 109.46748 * 164.72406 * 17 16 14 20 20 C 1.38252 * 120.02794 * 359.45219 * 16 14 13 21 21 C 1.38260 * 120.13046 * 0.27211 * 20 16 14 22 22 C 1.38181 * 120.09174 * 0.02562 * 21 20 16 23 23 C 1.53779 * 87.17365 * 334.60761 * 9 8 6 24 24 H 1.09004 * 109.46865 * 299.99477 * 1 2 3 25 25 H 1.08998 * 109.47587 * 59.99756 * 1 2 3 26 26 H 1.09002 * 109.47566 * 180.02562 * 1 2 3 27 27 H 1.09000 * 109.47358 * 179.97438 * 3 2 1 28 28 H 1.09001 * 109.47295 * 300.00246 * 3 2 1 29 29 H 1.09000 * 109.47154 * 60.00573 * 3 2 1 30 30 H 1.09002 * 109.46714 * 300.00280 * 4 2 1 31 31 H 1.08998 * 109.46708 * 59.99697 * 4 2 1 32 32 H 1.09000 * 109.47090 * 180.02562 * 4 2 1 33 33 H 1.09003 * 113.61404 * 25.51641 * 8 6 5 34 34 H 1.09004 * 113.61529 * 254.61347 * 8 6 5 35 35 H 1.08997 * 109.47410 * 63.46804 * 11 9 8 36 36 H 1.08994 * 109.47003 * 303.46633 * 11 9 8 37 37 H 1.09000 * 109.47161 * 44.72507 * 17 16 14 38 38 H 0.96709 * 113.99981 * 180.02562 * 18 17 16 39 39 H 1.48498 * 110.00336 * 298.68292 * 19 17 16 40 40 H 1.48504 * 109.99873 * 60.00145 * 19 17 16 41 41 H 1.08004 * 119.93662 * 180.25375 * 20 16 14 42 42 H 1.07999 * 119.95327 * 179.97438 * 21 20 16 43 43 H 1.07998 * 120.01768 * 179.97438 * 22 21 20 44 44 H 1.09002 * 113.62044 * 139.93601 * 23 9 8 45 45 H 1.09000 * 113.62061 * 270.84554 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4424 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0063 -0.6737 1.1667 6 6 1.5847 -2.0356 1.2645 7 1 1.2522 -2.4452 0.3106 8 6 2.5836 -2.9379 2.0077 9 6 1.3666 -3.6135 2.6614 10 1 0.9754 -4.4555 2.0902 11 6 1.5701 -3.9431 4.1416 12 8 0.4233 -4.6369 4.6371 13 6 0.4428 -5.0059 5.9454 14 6 -0.6361 -5.6891 6.4920 15 9 -1.7070 -5.9876 5.7242 16 6 -0.6151 -6.0583 7.8249 17 6 -1.7874 -6.7941 8.4212 18 8 -2.8664 -5.8810 8.6304 19 14 -1.2852 -7.5457 10.0502 20 6 0.4832 -5.7575 8.6089 21 6 1.5603 -5.0826 8.0649 22 6 1.5422 -4.7059 6.7355 23 6 0.6045 -2.2995 2.4220 24 1 -0.3633 0.5138 0.8901 25 1 -0.3634 0.5138 -0.8899 26 1 -0.3634 -1.0277 0.0005 27 1 3.1300 1.4424 0.0005 28 1 1.6767 1.9563 -0.8900 29 1 1.6768 1.9562 0.8900 30 1 1.6765 -1.7489 -1.2492 31 1 1.6766 -0.2074 -2.1392 32 1 3.1300 -0.7217 -1.2490 33 1 3.2161 -2.4001 2.7140 34 1 3.1486 -3.5984 1.3499 35 1 1.7070 -3.0195 4.7040 36 1 2.4528 -4.5722 4.2557 37 1 -2.1059 -7.5830 7.7398 38 1 -3.6564 -6.2867 9.0134 39 1 -0.1849 -8.5209 9.8420 40 1 -0.8489 -6.4803 10.9881 41 1 0.4998 -6.0501 9.6484 42 1 2.4166 -4.8487 8.6800 43 1 2.3840 -4.1784 6.3119 44 1 -0.4260 -2.4451 2.0981 45 1 0.6948 -1.5867 3.2417 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_11948474_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:32 Heat of formation + Delta-G solvation = -104.530526 kcal Electronic energy + Delta-G solvation = -25950.937052 eV Core-core repulsion = 22044.190103 eV Total energy + Delta-G solvation = -3906.746950 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.162 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -50.00648 -41.48987 -40.76775 -39.32377 -38.19609 -37.35665 -33.96097 -32.66873 -31.55050 -29.38306 -28.39029 -28.30884 -27.01835 -26.68073 -24.11862 -23.88792 -22.33251 -20.86446 -20.70597 -19.24999 -18.60681 -18.46987 -18.20007 -17.67215 -17.35409 -16.65651 -16.43313 -16.33601 -16.04117 -15.80841 -15.62217 -15.39949 -15.03890 -14.59262 -14.44057 -14.20403 -14.00765 -13.65599 -13.51696 -13.48151 -13.34153 -13.22001 -13.03208 -12.86994 -12.75273 -12.65977 -12.60785 -12.28270 -12.13023 -12.01262 -11.90332 -11.73525 -11.41440 -11.23920 -10.40925 -10.40115 -10.11017 -9.45826 -4.94825 -0.20192 -0.03166 1.21168 1.65561 1.82422 1.92274 2.25226 2.69290 3.01994 3.21795 3.40535 3.48338 3.59053 3.67842 3.71637 3.76610 3.86546 3.88833 3.94316 3.95122 4.04165 4.05426 4.08409 4.17350 4.29013 4.45838 4.49432 4.58668 4.63813 4.70632 4.72309 4.73142 4.75367 4.79783 4.81583 4.88264 4.90313 4.91946 4.96565 5.08403 5.09365 5.12044 5.26177 5.29612 5.33917 5.41307 6.10936 6.37215 6.80899 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.175 4.175 2 C 0.098 3.902 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.380 6.380 6 C 0.061 3.939 7 H 0.099 0.901 8 C -0.117 4.117 9 C -0.106 4.106 10 H 0.104 0.896 11 C 0.065 3.935 12 O -0.324 6.324 13 C 0.091 3.909 14 C 0.055 3.945 15 F -0.142 7.142 16 C -0.089 4.089 17 C -0.098 4.098 18 O -0.564 6.564 19 Si 0.802 3.198 20 C -0.149 4.149 21 C -0.074 4.074 22 C -0.177 4.177 23 C -0.151 4.151 24 H 0.055 0.945 25 H 0.076 0.924 26 H 0.058 0.942 27 H 0.060 0.940 28 H 0.084 0.916 29 H 0.056 0.944 30 H 0.062 0.938 31 H 0.077 0.923 32 H 0.062 0.938 33 H 0.095 0.905 34 H 0.091 0.909 35 H 0.075 0.925 36 H 0.085 0.915 37 H 0.078 0.922 38 H 0.404 0.596 39 H -0.282 1.282 40 H -0.277 1.277 41 H 0.141 0.859 42 H 0.170 0.830 43 H 0.168 0.832 44 H 0.066 0.934 45 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.733 -1.377 0.641 2.304 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.232 4.232 2 C 0.059 3.941 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.300 6.300 6 C 0.003 3.997 7 H 0.117 0.883 8 C -0.154 4.154 9 C -0.124 4.124 10 H 0.122 0.878 11 C -0.009 4.009 12 O -0.238 6.238 13 C 0.045 3.955 14 C 0.035 3.965 15 F -0.120 7.120 16 C -0.090 4.090 17 C -0.205 4.205 18 O -0.375 6.375 19 Si 0.704 3.296 20 C -0.167 4.167 21 C -0.092 4.092 22 C -0.195 4.195 23 C -0.189 4.189 24 H 0.074 0.926 25 H 0.095 0.905 26 H 0.077 0.923 27 H 0.079 0.921 28 H 0.103 0.897 29 H 0.075 0.925 30 H 0.081 0.919 31 H 0.096 0.904 32 H 0.081 0.919 33 H 0.113 0.887 34 H 0.109 0.891 35 H 0.094 0.906 36 H 0.103 0.897 37 H 0.096 0.904 38 H 0.256 0.744 39 H -0.209 1.209 40 H -0.204 1.204 41 H 0.158 0.842 42 H 0.188 0.812 43 H 0.186 0.814 44 H 0.085 0.915 45 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 2.710 -1.009 0.880 3.022 hybrid contribution -0.339 0.184 -0.985 1.058 sum 2.370 -0.825 -0.104 2.512 Atomic orbital electron populations 1.22452 0.95242 1.02548 1.02959 1.21682 0.93490 0.93505 0.85391 1.21792 1.01780 0.93112 1.02944 1.22448 1.02060 1.01055 0.97823 1.88003 1.74100 1.24058 1.43797 1.23681 0.95760 0.82472 0.97799 0.88289 1.23178 0.95907 0.96973 0.99387 1.22287 0.98877 0.97730 0.93526 0.87804 1.23114 0.86700 0.96445 0.94600 1.86125 1.44065 1.72070 1.21528 1.19206 0.94476 0.96690 0.85146 1.17135 0.84783 1.04872 0.89662 1.91448 1.53945 1.91587 1.75058 1.19662 0.97473 1.00532 0.91316 1.25134 0.88433 0.94866 1.12107 1.86454 1.26297 1.37717 1.86987 0.93851 0.84080 0.77820 0.73890 1.21064 0.94010 1.01659 0.99960 1.21380 0.98586 0.94678 0.94584 1.21552 0.98168 1.04757 0.95033 1.23638 0.99053 0.96600 0.99621 0.92593 0.90495 0.92317 0.92075 0.89730 0.92479 0.91926 0.90410 0.91935 0.88665 0.89076 0.90634 0.89655 0.90389 0.74405 1.20895 1.20446 0.84159 0.81244 0.81430 0.91517 0.89999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 -0.04 8.38 71.98 0.60 0.57 16 2 C 0.10 0.11 1.11 -10.80 -0.01 0.09 16 3 C -0.14 -0.01 8.84 71.98 0.64 0.62 16 4 C -0.18 0.23 8.38 71.98 0.60 0.83 16 5 O -0.38 -1.62 10.00 -148.98 -1.49 -3.11 16 6 C 0.06 0.04 2.82 31.18 0.09 0.13 16 7 H 0.10 -0.10 5.54 -2.39 -0.01 -0.11 16 8 C -0.12 0.22 7.47 31.12 0.23 0.45 16 9 C -0.11 0.01 4.00 -10.27 -0.04 -0.03 16 10 H 0.10 0.02 8.14 -2.39 -0.02 0.00 16 11 C 0.07 0.04 4.57 71.98 0.33 0.37 16 12 O -0.32 -2.71 10.00 -93.02 -0.93 -3.64 16 13 C 0.09 0.78 6.69 22.53 0.15 0.94 16 14 C 0.06 0.67 7.25 22.45 0.16 0.83 16 15 F -0.14 -2.21 16.59 44.97 0.75 -1.47 16 16 C -0.09 -0.76 5.30 -19.84 -0.11 -0.87 16 17 C -0.10 -0.36 2.44 71.24 0.17 -0.18 16 18 O -0.56 -2.43 12.86 -148.98 -1.92 -4.34 16 19 Si 0.80 -1.68 30.20 68.60 2.07 0.39 16 20 C -0.15 -0.73 8.66 22.28 0.19 -0.54 16 21 C -0.07 -0.09 10.04 22.26 0.22 0.14 16 22 C -0.18 -0.41 9.04 22.36 0.20 -0.21 16 23 C -0.15 -0.30 7.48 31.18 0.23 -0.07 16 24 H 0.05 0.11 8.14 -2.39 -0.02 0.10 16 25 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 26 H 0.06 0.01 7.02 -2.39 -0.02 0.00 16 27 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 28 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 29 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 30 H 0.06 -0.12 6.24 -2.39 -0.01 -0.14 16 31 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 32 H 0.06 -0.03 8.14 -2.39 -0.02 -0.05 16 33 H 0.09 -0.18 8.10 -2.39 -0.02 -0.20 16 34 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 35 H 0.08 -0.08 7.40 -2.39 -0.02 -0.09 16 36 H 0.09 -0.26 7.66 -2.39 -0.02 -0.28 16 37 H 0.08 0.18 7.89 -2.39 -0.02 0.16 16 38 H 0.40 -2.85 8.74 -74.05 -0.65 -3.50 16 39 H -0.28 -0.76 7.11 99.48 0.71 -0.05 16 40 H -0.28 -0.74 6.75 99.48 0.67 -0.07 16 41 H 0.14 0.34 4.89 -2.91 -0.01 0.32 16 42 H 0.17 -0.96 8.06 -2.91 -0.02 -0.99 16 43 H 0.17 -0.63 6.30 -2.91 -0.02 -0.65 16 44 H 0.07 0.20 8.14 -2.39 -0.02 0.18 16 45 H 0.08 0.31 7.92 -2.39 -0.02 0.29 16 Total: 0.00 -17.68 363.17 2.50 -15.18 By element: Atomic # 1 Polarization: -6.43 SS G_CDS: 0.34 Total: -6.09 kcal Atomic # 6 Polarization: -0.59 SS G_CDS: 3.67 Total: 3.08 kcal Atomic # 8 Polarization: -6.76 SS G_CDS: -4.34 Total: -11.09 kcal Atomic # 9 Polarization: -2.21 SS G_CDS: 0.75 Total: -1.47 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: 2.07 Total: 0.39 kcal Total: -17.68 2.50 -15.18 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_11948474_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.350 kcal (2) G-P(sol) polarization free energy of solvation -17.678 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.028 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.497 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.181 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.531 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds