Wall clock time and date at job start Mon Mar 8 2021 10:35:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86306 * 109.47328 * 2 1 4 4 C 1.50707 * 109.46760 * 240.00277 * 2 1 3 5 5 C 1.38254 * 119.93677 * 299.99846 * 4 2 1 6 6 C 1.38263 * 120.06083 * 180.02562 * 5 4 2 7 7 Cl 1.73604 * 120.02796 * 179.97438 * 6 5 4 8 8 C 1.38779 * 119.94201 * 0.02562 * 6 5 4 9 9 O 1.35945 * 120.06972 * 180.02562 * 8 6 5 10 10 C 1.42898 * 117.00206 * 89.99438 * 9 8 6 11 11 C 1.52997 * 109.47319 * 180.02562 * 10 9 8 12 12 H 1.09008 * 109.47017 * 55.00070 * 11 10 9 13 13 C 1.52994 * 109.47404 * 174.99993 * 11 10 9 14 14 C 1.52997 * 109.47404 * 180.02562 * 13 11 10 15 15 C 1.53002 * 109.47369 * 300.00003 * 14 13 11 16 16 H 1.08998 * 109.47238 * 300.00562 * 15 14 13 17 17 O 1.42903 * 109.47575 * 179.97438 * 15 14 13 18 18 C 1.53006 * 109.46654 * 59.99819 * 15 14 13 19 19 C 1.52997 * 109.47380 * 300.00174 * 18 15 14 20 20 C 1.38798 * 119.86968 * 0.27231 * 8 6 5 21 21 Cl 1.73603 * 120.03043 * 179.70314 * 20 8 6 22 22 C 1.38257 * 119.93241 * 120.02118 * 4 2 1 23 23 H 0.96699 * 114.00530 * 59.99738 * 1 2 3 24 24 H 1.08997 * 109.47386 * 120.00453 * 2 1 3 25 25 H 1.48502 * 110.00017 * 298.68631 * 3 2 1 26 26 H 1.48501 * 109.99873 * 60.00247 * 3 2 1 27 27 H 1.07999 * 119.96544 * 0.04569 * 5 4 2 28 28 H 1.09002 * 109.47259 * 300.00659 * 10 9 8 29 29 H 1.09001 * 109.47074 * 60.00681 * 10 9 8 30 30 H 1.09000 * 109.47476 * 300.00087 * 13 11 10 31 31 H 1.09008 * 109.46970 * 60.00049 * 13 11 10 32 32 H 1.08995 * 109.47630 * 59.99990 * 14 13 11 33 33 H 1.09002 * 109.47754 * 180.02562 * 14 13 11 34 34 H 0.96698 * 114.00211 * 180.02562 * 17 15 14 35 35 H 1.08998 * 109.47136 * 60.00111 * 18 15 14 36 36 H 1.09000 * 109.46811 * 179.97438 * 18 15 14 37 37 H 1.09008 * 109.47017 * 300.00189 * 19 18 15 38 38 H 1.08998 * 109.47192 * 180.02562 * 19 18 15 39 39 H 1.07997 * 119.97506 * 0.02562 * 22 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2306 5 6 1.5964 -2.0340 -1.4481 6 6 2.0562 -2.6884 -2.5759 7 17 1.6358 -4.3507 -2.8479 8 6 2.8550 -2.0156 -3.4898 9 8 3.3081 -2.6563 -4.5999 10 6 2.4852 -2.5937 -5.7665 11 6 3.1540 -3.3671 -6.9046 12 1 3.3664 -4.3848 -6.5766 13 6 2.2179 -3.4060 -8.1140 14 6 2.8865 -4.1800 -9.2519 15 6 4.1938 -3.4869 -9.6410 16 1 3.9818 -2.4693 -9.9692 17 8 4.8186 -4.2101 -10.7034 18 6 5.1300 -3.4480 -8.4315 19 6 4.4614 -2.6740 -7.2936 20 6 3.1946 -0.6886 -3.2657 21 17 4.1999 0.1548 -4.4023 22 6 2.7263 -0.0372 -2.1395 23 1 -0.3934 0.4417 -0.7650 24 1 1.7923 -0.5139 0.8899 25 1 1.5878 2.4586 -1.2242 26 1 1.5616 2.4679 1.2085 27 1 0.9748 -2.5572 -0.7365 28 1 1.5128 -3.0358 -5.5494 29 1 2.3532 -1.5530 -6.0625 30 1 1.2867 -3.9002 -7.8370 31 1 2.0055 -2.3884 -8.4420 32 1 3.0985 -5.1975 -8.9238 33 1 2.2197 -4.2074 -10.1137 34 1 5.6548 -3.8268 -11.0017 35 1 5.3420 -4.4656 -8.1033 36 1 6.0615 -2.9546 -8.7088 37 1 4.2494 -1.6564 -7.6218 38 1 5.1286 -2.6460 -6.4321 39 1 2.9870 0.9965 -1.9667 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_12913562_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:35:13 Heat of formation + Delta-G solvation = -117.916926 kcal Electronic energy + Delta-G solvation = -24379.648045 eV Core-core repulsion = 20533.250246 eV Total energy + Delta-G solvation = -3846.397799 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.062 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.53966 -40.28431 -39.17321 -37.89779 -37.85973 -37.15066 -36.62107 -32.59266 -32.02094 -31.85576 -31.26225 -27.20726 -26.00870 -24.43091 -23.81838 -22.88515 -22.31091 -20.91448 -19.44611 -18.69221 -18.19197 -18.00164 -17.05546 -16.91831 -16.59786 -16.29537 -16.07805 -15.68837 -15.54635 -15.39658 -14.95234 -14.72895 -14.53359 -14.17291 -13.83176 -13.60402 -13.47240 -13.24945 -13.20867 -13.19112 -12.69832 -12.50416 -12.21960 -12.19015 -12.16362 -12.13314 -11.91793 -11.70318 -11.62356 -11.21477 -11.00456 -10.85207 -10.71084 -10.00734 -9.87532 -5.10873 -0.45669 -0.31956 0.65713 1.00975 1.17749 1.44425 1.82253 1.85150 2.37979 3.12880 3.15769 3.26811 3.55574 3.60999 3.65742 3.73892 3.79248 3.87342 4.04963 4.05681 4.14156 4.22902 4.30892 4.32223 4.36962 4.42479 4.45758 4.48754 4.58667 4.68503 4.76956 4.88053 4.92443 5.02223 5.06708 5.10174 5.13261 5.13948 5.31329 5.40480 6.15527 6.19964 6.70653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.525 6.525 2 C -0.072 4.072 3 Si 0.681 3.319 4 C -0.101 4.101 5 C -0.067 4.067 6 C -0.047 4.047 7 Cl -0.037 7.037 8 C 0.123 3.877 9 O -0.314 6.314 10 C 0.071 3.929 11 C -0.085 4.085 12 H 0.086 0.914 13 C -0.110 4.110 14 C -0.111 4.111 15 C 0.103 3.897 16 H 0.054 0.946 17 O -0.569 6.569 18 C -0.152 4.152 19 C -0.109 4.109 20 C -0.042 4.042 21 Cl -0.037 7.037 22 C -0.093 4.093 23 H 0.378 0.622 24 H 0.127 0.873 25 H -0.255 1.255 26 H -0.250 1.250 27 H 0.149 0.851 28 H 0.059 0.941 29 H 0.059 0.941 30 H 0.073 0.927 31 H 0.068 0.932 32 H 0.072 0.928 33 H 0.072 0.928 34 H 0.379 0.621 35 H 0.072 0.928 36 H 0.065 0.935 37 H 0.062 0.938 38 H 0.076 0.924 39 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.772 2.640 0.392 2.778 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.182 4.182 3 Si 0.581 3.419 4 C -0.102 4.102 5 C -0.086 4.086 6 C -0.074 4.074 7 Cl -0.008 7.008 8 C 0.077 3.923 9 O -0.231 6.231 10 C -0.003 4.003 11 C -0.103 4.103 12 H 0.104 0.896 13 C -0.147 4.147 14 C -0.148 4.148 15 C 0.044 3.956 16 H 0.072 0.928 17 O -0.375 6.375 18 C -0.190 4.190 19 C -0.146 4.146 20 C -0.070 4.070 21 Cl -0.008 7.008 22 C -0.111 4.111 23 H 0.226 0.774 24 H 0.145 0.855 25 H -0.180 1.180 26 H -0.175 1.175 27 H 0.167 0.833 28 H 0.077 0.923 29 H 0.077 0.923 30 H 0.092 0.908 31 H 0.087 0.913 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.226 0.774 35 H 0.091 0.909 36 H 0.084 0.916 37 H 0.081 0.919 38 H 0.095 0.905 39 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges 0.330 2.609 0.851 2.764 hybrid contribution -0.617 0.182 -0.671 0.929 sum -0.287 2.791 0.180 2.811 Atomic orbital electron populations 1.86633 1.17163 1.79929 1.49418 1.25049 0.84327 1.11143 0.97671 0.94964 0.91703 0.74137 0.81049 1.20236 0.98543 0.94198 0.97201 1.20989 0.98319 0.93702 0.95603 1.21284 1.00287 0.88302 0.97572 1.98417 1.91814 1.14446 1.96139 1.18068 0.95717 0.88977 0.89558 1.86089 1.46409 1.72675 1.17885 1.22922 0.93438 1.00501 0.83452 1.21193 0.95742 1.00542 0.92839 0.89608 1.21475 0.98184 1.01219 0.93869 1.21433 0.95219 0.99945 0.98219 1.21848 0.92801 0.94652 0.86280 0.92791 1.86517 1.40943 1.56219 1.53847 1.22280 0.98774 1.01789 0.96133 1.21488 0.96146 0.98666 0.98333 1.21113 0.99486 0.91753 0.94653 1.98413 1.66586 1.76397 1.59356 1.20968 0.97348 1.00521 0.92311 0.77410 0.85514 1.17968 1.17465 0.83307 0.92290 0.92309 0.90830 0.91345 0.90926 0.90888 0.77411 0.90945 0.91586 0.91892 0.90549 0.83541 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.32 12.77 -35.23 -0.45 -0.13 16 2 C -0.07 0.14 2.82 36.01 0.10 0.24 16 3 Si 0.68 -1.57 29.78 -169.99 -5.06 -6.64 16 4 C -0.10 0.13 5.39 -104.61 -0.56 -0.43 16 5 C -0.07 0.03 9.39 -39.57 -0.37 -0.34 16 6 C -0.05 -0.03 6.33 -39.37 -0.25 -0.28 16 7 Cl -0.04 -0.04 28.50 -51.86 -1.48 -1.52 16 8 C 0.12 0.13 5.71 -39.17 -0.22 -0.10 16 9 O -0.31 -0.39 8.51 -19.57 -0.17 -0.56 16 10 C 0.07 -0.02 5.44 37.16 0.20 0.18 16 11 C -0.08 0.07 2.43 -90.62 -0.22 -0.15 16 12 H 0.09 0.00 8.14 -51.92 -0.42 -0.42 16 13 C -0.11 0.15 5.20 -26.74 -0.14 0.02 16 14 C -0.11 0.01 5.57 -26.73 -0.15 -0.14 16 15 C 0.10 0.00 3.47 -26.73 -0.09 -0.10 16 16 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 17 O -0.57 -0.72 13.32 -35.23 -0.47 -1.19 16 18 C -0.15 0.09 5.54 -26.73 -0.15 -0.06 16 19 C -0.11 0.07 5.10 -26.73 -0.14 -0.06 16 20 C -0.04 -0.01 6.33 -39.36 -0.25 -0.26 16 21 Cl -0.04 -0.01 28.50 -51.86 -1.48 -1.49 16 22 C -0.09 0.11 8.45 -39.56 -0.33 -0.23 16 23 H 0.38 -1.28 8.70 45.56 0.40 -0.88 16 24 H 0.13 -0.37 7.96 -51.93 -0.41 -0.78 16 25 H -0.26 0.13 7.11 56.52 0.40 0.53 16 26 H -0.25 -0.25 7.11 56.52 0.40 0.15 16 27 H 0.15 -0.17 8.06 -52.49 -0.42 -0.60 16 28 H 0.06 -0.03 8.14 -51.93 -0.42 -0.45 16 29 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 30 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.07 -0.12 8.14 -51.92 -0.42 -0.55 16 32 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.38 -0.97 9.08 45.56 0.41 -0.56 16 35 H 0.07 0.03 8.14 -51.93 -0.42 -0.40 16 36 H 0.07 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.06 -0.05 8.14 -51.92 -0.42 -0.48 16 38 H 0.08 0.03 7.82 -51.93 -0.41 -0.38 16 39 H 0.15 -0.41 4.87 -52.49 -0.26 -0.67 16 LS Contribution 348.84 15.07 5.26 5.26 Total: 0.00 -5.26 348.84 -10.96 -16.21 By element: Atomic # 1 Polarization: -3.70 SS G_CDS: -4.54 Total: -8.24 kcal Atomic # 6 Polarization: 0.87 SS G_CDS: -2.57 Total: -1.71 kcal Atomic # 8 Polarization: -0.79 SS G_CDS: -1.09 Total: -1.88 kcal Atomic # 14 Polarization: -1.57 SS G_CDS: -5.06 Total: -6.64 kcal Atomic # 17 Polarization: -0.05 SS G_CDS: -2.96 Total: -3.01 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -5.26 -10.96 -16.21 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_12913562_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.704 kcal (2) G-P(sol) polarization free energy of solvation -5.256 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.960 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.957 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.213 kcal (6) G-S(sol) free energy of system = (1) + (5) -117.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds