Wall clock time and date at job start Mon Mar 8 2021 10:00:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86305 * 109.47339 * 2 1 4 4 C 1.50703 * 109.47321 * 119.99845 * 2 1 3 5 5 N 1.31808 * 119.65252 * 210.02115 * 4 2 1 6 6 C 1.31864 * 121.79258 * 179.97438 * 5 4 2 7 7 C 1.38310 * 120.87148 * 359.74575 * 6 5 4 8 8 Br 1.89099 * 120.39848 * 180.28383 * 7 6 5 9 9 C 1.38657 * 119.20464 * 0.50917 * 7 6 5 10 10 C 1.38758 * 119.64485 * 30.00153 * 4 2 1 11 11 O 1.35914 * 120.46933 * 0.04116 * 10 4 2 12 12 C 1.42901 * 116.99874 * 179.97438 * 11 10 4 13 13 C 1.52998 * 109.46811 * 180.02562 * 12 11 10 14 14 H 1.08997 * 109.47660 * 54.99738 * 13 12 11 15 15 C 1.53007 * 109.47169 * 175.00266 * 13 12 11 16 16 C 1.52998 * 109.47169 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47208 * 299.99769 * 16 15 13 18 18 H 1.09004 * 109.46902 * 300.00394 * 17 16 15 19 19 O 1.42898 * 109.47113 * 180.02562 * 17 16 15 20 20 C 1.52998 * 109.47226 * 59.99852 * 17 16 15 21 21 C 1.53001 * 109.47498 * 300.00215 * 20 17 16 22 22 H 0.96703 * 114.00171 * 300.00402 * 1 2 3 23 23 H 1.09003 * 109.47221 * 240.00023 * 2 1 3 24 24 H 1.48495 * 110.00071 * 178.68176 * 3 2 1 25 25 H 1.48503 * 109.99904 * 299.99948 * 3 2 1 26 26 H 1.08004 * 119.56222 * 179.97438 * 6 5 4 27 27 H 1.08002 * 120.82067 * 179.78194 * 9 7 6 28 28 H 1.08997 * 109.47338 * 299.99930 * 12 11 10 29 29 H 1.09003 * 109.47036 * 60.00411 * 12 11 10 30 30 H 1.09001 * 109.46532 * 300.00178 * 15 13 12 31 31 H 1.09004 * 109.47075 * 59.99524 * 15 13 12 32 32 H 1.08999 * 109.47083 * 59.99947 * 16 15 13 33 33 H 1.09000 * 109.46642 * 179.97438 * 16 15 13 34 34 H 0.96707 * 113.99766 * 180.02562 * 19 17 16 35 35 H 1.09004 * 109.46737 * 60.00441 * 20 17 16 36 36 H 1.09003 * 109.47397 * 179.97438 * 20 17 16 37 37 H 1.08999 * 109.46883 * 299.99718 * 21 20 17 38 38 H 1.09000 * 109.46992 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 7 3.0838 -0.3561 1.7631 6 6 3.5630 -0.9485 2.8393 7 6 2.8647 -1.9697 3.4578 8 35 3.5607 -2.8045 5.0052 9 6 1.6504 -2.3773 2.9267 10 6 1.1755 -1.7302 1.7909 11 8 -0.0120 -2.0919 1.2375 12 6 -0.7287 -3.1513 1.8747 13 6 -2.0301 -3.4158 1.1148 14 1 -1.8053 -3.6121 0.0665 15 6 -2.7369 -4.6299 1.7209 16 6 -4.0386 -4.8940 0.9614 17 6 -4.9485 -3.6686 1.0674 18 1 -5.1730 -3.4724 2.1159 19 8 -6.1645 -3.9155 0.3586 20 6 -4.2418 -2.4545 0.4614 21 6 -2.9401 -2.1903 1.2209 22 1 -0.3934 0.4418 0.7650 23 1 1.7923 -0.5138 -0.8900 24 1 3.5346 1.7703 0.0321 25 1 1.5615 2.4679 -1.2085 26 1 4.5116 -0.6295 3.2454 27 1 1.0851 -3.1744 3.3864 28 1 -0.1184 -4.0544 1.8746 29 1 -0.9585 -2.8681 2.9019 30 1 -2.0884 -5.5027 1.6458 31 1 -2.9618 -4.4335 2.7693 32 1 -3.8141 -5.0902 -0.0870 33 1 -4.5418 -5.7592 1.3930 34 1 -6.7905 -3.1788 0.3830 35 1 -4.0173 -2.6507 -0.5871 36 1 -4.8902 -1.5816 0.5365 37 1 -3.1646 -1.9941 2.2693 38 1 -2.4364 -1.3257 0.7888 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_13445644_16737256.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:00:02 Heat of formation + Delta-G solvation = -91.363350 kcal Electronic energy + Delta-G solvation = -22677.552947 eV Core-core repulsion = 19146.662268 eV Total energy + Delta-G solvation = -3530.890678 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.046 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.11395 -40.41331 -39.16945 -37.80158 -36.74949 -34.41868 -32.63781 -31.90939 -31.50079 -31.06370 -27.08526 -27.06789 -24.34458 -23.87836 -23.27383 -22.19080 -20.97825 -19.33019 -18.56435 -18.21724 -18.19182 -17.36988 -16.94325 -16.49581 -16.18037 -15.56692 -15.52027 -15.43198 -15.08211 -14.85478 -14.65877 -14.22310 -14.08008 -13.82722 -13.51074 -13.29059 -13.12737 -12.89023 -12.65191 -12.30010 -12.21949 -12.15518 -11.89279 -11.72915 -11.69959 -11.59714 -11.18888 -11.00741 -10.75484 -10.60221 -10.35817 -9.44874 -4.90382 -0.44275 -0.04380 0.31943 1.35493 1.81082 1.88689 2.13397 2.39709 2.98083 3.10750 3.20953 3.49841 3.50908 3.55179 3.60171 3.67724 3.71115 3.93709 3.99625 4.03222 4.14854 4.23370 4.24700 4.34470 4.38845 4.42397 4.47781 4.52132 4.68431 4.71649 4.86682 4.96512 5.00201 5.05731 5.07869 5.09867 5.27151 5.34765 6.00802 6.46322 6.66709 6.67827 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.521 6.521 2 C -0.054 4.054 3 Si 0.715 3.285 4 C 0.079 3.921 5 N -0.433 5.433 6 C 0.097 3.903 7 C -0.105 4.105 8 Br -0.023 7.023 9 C -0.142 4.142 10 C 0.110 3.890 11 O -0.272 6.272 12 C 0.054 3.946 13 C -0.084 4.084 14 H 0.086 0.914 15 C -0.111 4.111 16 C -0.111 4.111 17 C 0.103 3.897 18 H 0.054 0.946 19 O -0.569 6.569 20 C -0.152 4.152 21 C -0.111 4.111 22 H 0.375 0.625 23 H 0.124 0.876 24 H -0.247 1.247 25 H -0.260 1.260 26 H 0.171 0.829 27 H 0.151 0.849 28 H 0.064 0.936 29 H 0.065 0.935 30 H 0.073 0.927 31 H 0.068 0.932 32 H 0.072 0.928 33 H 0.073 0.927 34 H 0.379 0.621 35 H 0.072 0.928 36 H 0.066 0.934 37 H 0.062 0.938 38 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.877 0.781 3.423 3.981 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.324 6.324 2 C -0.165 4.165 3 Si 0.614 3.386 4 C -0.061 4.061 5 N -0.144 5.144 6 C -0.061 4.061 7 C -0.186 4.186 8 Br 0.062 6.938 9 C -0.170 4.170 10 C 0.060 3.940 11 O -0.183 6.183 12 C -0.022 4.022 13 C -0.102 4.102 14 H 0.105 0.895 15 C -0.148 4.148 16 C -0.149 4.149 17 C 0.044 3.956 18 H 0.072 0.928 19 O -0.375 6.375 20 C -0.189 4.189 21 C -0.148 4.148 22 H 0.221 0.779 23 H 0.141 0.859 24 H -0.171 1.171 25 H -0.185 1.185 26 H 0.188 0.812 27 H 0.169 0.831 28 H 0.082 0.918 29 H 0.084 0.916 30 H 0.091 0.909 31 H 0.087 0.913 32 H 0.091 0.909 33 H 0.091 0.909 34 H 0.226 0.774 35 H 0.091 0.909 36 H 0.085 0.915 37 H 0.080 0.920 38 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.409 0.904 2.337 2.539 hybrid contribution -0.652 -0.956 0.410 1.227 sum -1.061 -0.051 2.747 2.945 Atomic orbital electron populations 1.86569 1.15963 1.81550 1.48357 1.24957 0.85591 1.10831 0.95090 0.94237 0.82129 0.76213 0.85982 1.21596 0.91065 0.94699 0.98717 1.67423 1.10884 1.26407 1.09674 1.22693 0.99937 0.92128 0.91385 1.22850 0.97878 1.00548 0.97372 1.96847 1.85373 1.79223 1.32394 1.21735 0.96510 1.02074 0.96701 1.19741 0.87774 0.94217 0.92242 1.86377 1.28568 1.51648 1.51714 1.23063 0.93120 0.89083 0.96906 1.21188 0.92079 0.95986 1.00992 0.89536 1.21488 0.96150 0.97298 0.99882 1.21431 0.94328 0.97328 1.01797 1.21847 0.84481 0.94780 0.94503 0.92793 1.86520 1.28964 1.45029 1.77011 1.22268 0.97338 0.98192 1.01141 1.21521 0.94773 0.97951 1.00568 0.77852 0.85920 1.17090 1.18497 0.81166 0.83147 0.91808 0.91636 0.90865 0.91290 0.90935 0.90859 0.77366 0.90919 0.91497 0.91950 0.90008 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.06 10.63 -58.08 -0.62 -0.55 16 2 C -0.05 -0.02 2.92 36.01 0.11 0.09 16 3 Si 0.71 0.02 31.89 -169.99 -5.42 -5.40 16 4 C 0.08 0.07 6.09 -82.41 -0.50 -0.43 16 5 N -0.43 -0.70 8.37 -9.33 -0.08 -0.77 16 6 C 0.10 0.05 10.94 -17.51 -0.19 -0.15 16 7 C -0.10 -0.01 6.24 -39.40 -0.25 -0.26 16 8 Br -0.02 0.00 33.73 -68.01 -2.29 -2.29 16 9 C -0.14 0.05 8.90 -39.11 -0.35 -0.30 16 10 C 0.11 0.03 6.56 -39.08 -0.26 -0.23 16 11 O -0.27 0.06 7.41 -42.32 -0.31 -0.25 16 12 C 0.05 -0.12 4.14 37.16 0.15 0.04 16 13 C -0.08 0.17 2.43 -90.61 -0.22 -0.05 16 14 H 0.09 -0.06 8.14 -51.93 -0.42 -0.48 16 15 C -0.11 0.27 5.20 -26.73 -0.14 0.13 16 16 C -0.11 0.09 5.57 -26.73 -0.15 -0.06 16 17 C 0.10 -0.07 3.47 -26.73 -0.09 -0.17 16 18 H 0.05 -0.07 8.14 -51.93 -0.42 -0.49 16 19 O -0.57 -0.45 13.32 -35.23 -0.47 -0.92 16 20 C -0.15 0.21 5.55 -26.73 -0.15 0.07 16 21 C -0.11 0.22 5.10 -26.73 -0.14 0.09 16 22 H 0.37 -1.28 8.70 45.56 0.40 -0.88 16 23 H 0.12 0.10 7.96 -51.93 -0.41 -0.31 16 24 H -0.25 -0.77 7.11 56.52 0.40 -0.37 16 25 H -0.26 -0.69 7.11 56.52 0.40 -0.29 16 26 H 0.17 -0.23 8.06 -52.48 -0.42 -0.65 16 27 H 0.15 -0.30 6.45 -52.49 -0.34 -0.64 16 28 H 0.06 -0.16 7.70 -51.93 -0.40 -0.56 16 29 H 0.07 -0.21 7.70 -51.93 -0.40 -0.61 16 30 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 31 H 0.07 -0.21 8.14 -51.93 -0.42 -0.63 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.07 -0.03 8.14 -51.93 -0.42 -0.45 16 34 H 0.38 -1.15 9.08 45.56 0.41 -0.73 16 35 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 36 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 37 H 0.06 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.08 -0.11 7.82 -51.93 -0.41 -0.52 16 LS Contribution 329.42 15.07 4.96 4.96 Total: 0.00 -5.70 329.42 -10.97 -16.68 By element: Atomic # 1 Polarization: -5.66 SS G_CDS: -4.57 Total: -10.23 kcal Atomic # 6 Polarization: 0.95 SS G_CDS: -2.17 Total: -1.23 kcal Atomic # 7 Polarization: -0.70 SS G_CDS: -0.08 Total: -0.77 kcal Atomic # 8 Polarization: -0.32 SS G_CDS: -1.40 Total: -1.72 kcal Atomic # 14 Polarization: 0.02 SS G_CDS: -5.42 Total: -5.40 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -2.29 Total: -2.29 kcal Total LS contribution 4.96 Total: 4.96 kcal Total: -5.70 -10.97 -16.68 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_13445644_16737256.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.688 kcal (2) G-P(sol) polarization free energy of solvation -5.704 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -80.392 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.971 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.363 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds