Wall clock time and date at job start Mon Mar 8 2021 10:00:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86305 * 109.47339 * 2 1 4 4 C 1.50703 * 109.47321 * 119.99845 * 2 1 3 5 5 N 1.31808 * 119.65252 * 210.02115 * 4 2 1 6 6 C 1.31864 * 121.79258 * 179.97438 * 5 4 2 7 7 C 1.38310 * 120.87148 * 359.74575 * 6 5 4 8 8 Br 1.89099 * 120.39848 * 180.28383 * 7 6 5 9 9 C 1.38657 * 119.20464 * 0.50917 * 7 6 5 10 10 C 1.38758 * 119.64485 * 30.00153 * 4 2 1 11 11 O 1.35914 * 120.46933 * 0.04116 * 10 4 2 12 12 C 1.42901 * 116.99874 * 179.97438 * 11 10 4 13 13 C 1.52998 * 109.46811 * 180.02562 * 12 11 10 14 14 H 1.08997 * 109.47660 * 54.99738 * 13 12 11 15 15 C 1.53007 * 109.47169 * 175.00266 * 13 12 11 16 16 C 1.52998 * 109.47169 * 179.97438 * 15 13 12 17 17 C 1.52997 * 109.47208 * 299.99769 * 16 15 13 18 18 H 1.09004 * 109.46902 * 300.00394 * 17 16 15 19 19 O 1.42898 * 109.47113 * 180.02562 * 17 16 15 20 20 C 1.52998 * 109.47226 * 59.99852 * 17 16 15 21 21 C 1.53001 * 109.47498 * 300.00215 * 20 17 16 22 22 H 0.96703 * 114.00171 * 300.00402 * 1 2 3 23 23 H 1.09003 * 109.47221 * 240.00023 * 2 1 3 24 24 H 1.48495 * 110.00071 * 178.68176 * 3 2 1 25 25 H 1.48503 * 109.99904 * 299.99948 * 3 2 1 26 26 H 1.08004 * 119.56222 * 179.97438 * 6 5 4 27 27 H 1.08002 * 120.82067 * 179.78194 * 9 7 6 28 28 H 1.08997 * 109.47338 * 299.99930 * 12 11 10 29 29 H 1.09003 * 109.47036 * 60.00411 * 12 11 10 30 30 H 1.09001 * 109.46532 * 300.00178 * 15 13 12 31 31 H 1.09004 * 109.47075 * 59.99524 * 15 13 12 32 32 H 1.08999 * 109.47083 * 59.99947 * 16 15 13 33 33 H 1.09000 * 109.46642 * 179.97438 * 16 15 13 34 34 H 0.96707 * 113.99766 * 180.02562 * 19 17 16 35 35 H 1.09004 * 109.46737 * 60.00441 * 20 17 16 36 36 H 1.09003 * 109.47397 * 179.97438 * 20 17 16 37 37 H 1.08999 * 109.46883 * 299.99718 * 21 20 17 38 38 H 1.09000 * 109.46992 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 7 3.0838 -0.3561 1.7631 6 6 3.5630 -0.9485 2.8393 7 6 2.8647 -1.9697 3.4578 8 35 3.5607 -2.8045 5.0052 9 6 1.6504 -2.3773 2.9267 10 6 1.1755 -1.7302 1.7909 11 8 -0.0120 -2.0919 1.2375 12 6 -0.7287 -3.1513 1.8747 13 6 -2.0301 -3.4158 1.1148 14 1 -1.8053 -3.6121 0.0665 15 6 -2.7369 -4.6299 1.7209 16 6 -4.0386 -4.8940 0.9614 17 6 -4.9485 -3.6686 1.0674 18 1 -5.1730 -3.4724 2.1159 19 8 -6.1645 -3.9155 0.3586 20 6 -4.2418 -2.4545 0.4614 21 6 -2.9401 -2.1903 1.2209 22 1 -0.3934 0.4418 0.7650 23 1 1.7923 -0.5138 -0.8900 24 1 3.5346 1.7703 0.0321 25 1 1.5615 2.4679 -1.2085 26 1 4.5116 -0.6295 3.2454 27 1 1.0851 -3.1744 3.3864 28 1 -0.1184 -4.0544 1.8746 29 1 -0.9585 -2.8681 2.9019 30 1 -2.0884 -5.5027 1.6458 31 1 -2.9618 -4.4335 2.7693 32 1 -3.8141 -5.0902 -0.0870 33 1 -4.5418 -5.7592 1.3930 34 1 -6.7905 -3.1788 0.3830 35 1 -4.0173 -2.6507 -0.5871 36 1 -4.8902 -1.5816 0.5365 37 1 -3.1646 -1.9941 2.2693 38 1 -2.4364 -1.3257 0.7888 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_13445644_16737256.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:00:01 Heat of formation + Delta-G solvation = -87.552441 kcal Electronic energy + Delta-G solvation = -22677.387693 eV Core-core repulsion = 19146.662268 eV Total energy + Delta-G solvation = -3530.725425 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 344.046 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.07996 -40.31330 -39.11141 -37.78455 -36.69070 -34.40203 -32.57919 -31.77615 -31.44195 -31.03546 -27.08702 -26.95129 -24.28636 -23.75918 -23.24565 -22.09535 -20.84787 -19.27436 -18.52432 -18.18098 -18.16102 -17.27826 -16.91223 -16.42130 -16.12862 -15.49132 -15.44549 -15.42361 -15.03289 -14.80052 -14.57169 -14.18477 -14.09370 -13.83522 -13.45592 -13.15608 -13.02958 -12.78070 -12.65728 -12.25351 -12.13520 -12.06478 -12.02871 -11.63607 -11.58113 -11.52481 -11.06898 -11.01178 -10.67747 -10.58021 -10.35433 -9.42568 -4.95374 -0.43251 -0.01758 0.34205 1.32375 1.75100 1.95216 2.05038 2.39478 2.99658 3.24933 3.26175 3.57448 3.64078 3.67281 3.70938 3.76161 3.82408 4.03751 4.10056 4.18729 4.26655 4.36379 4.38238 4.44396 4.48424 4.52394 4.54641 4.63090 4.74145 4.86325 5.00924 5.07389 5.09710 5.14081 5.18733 5.22928 5.40817 5.47723 6.09757 6.55700 6.77660 6.87356 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.529 6.529 2 C -0.052 4.052 3 Si 0.792 3.208 4 C 0.069 3.931 5 N -0.452 5.452 6 C 0.090 3.910 7 C -0.107 4.107 8 Br -0.020 7.020 9 C -0.139 4.139 10 C 0.110 3.890 11 O -0.280 6.280 12 C 0.051 3.949 13 C -0.079 4.079 14 H 0.069 0.931 15 C -0.104 4.104 16 C -0.114 4.114 17 C 0.100 3.900 18 H 0.065 0.935 19 O -0.593 6.593 20 C -0.147 4.147 21 C -0.107 4.107 22 H 0.390 0.610 23 H 0.115 0.885 24 H -0.290 1.290 25 H -0.295 1.295 26 H 0.183 0.817 27 H 0.168 0.832 28 H 0.070 0.930 29 H 0.082 0.918 30 H 0.079 0.921 31 H 0.082 0.918 32 H 0.057 0.943 33 H 0.068 0.932 34 H 0.393 0.607 35 H 0.055 0.945 36 H 0.074 0.926 37 H 0.074 0.926 38 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.266 0.508 4.703 5.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.334 6.334 2 C -0.163 4.163 3 Si 0.697 3.303 4 C -0.071 4.071 5 N -0.164 5.164 6 C -0.069 4.069 7 C -0.189 4.189 8 Br 0.065 6.935 9 C -0.167 4.167 10 C 0.060 3.940 11 O -0.191 6.191 12 C -0.024 4.024 13 C -0.098 4.098 14 H 0.087 0.913 15 C -0.141 4.141 16 C -0.152 4.152 17 C 0.042 3.958 18 H 0.083 0.917 19 O -0.401 6.401 20 C -0.185 4.185 21 C -0.144 4.144 22 H 0.239 0.761 23 H 0.132 0.868 24 H -0.217 1.217 25 H -0.223 1.223 26 H 0.200 0.800 27 H 0.186 0.814 28 H 0.088 0.912 29 H 0.101 0.899 30 H 0.097 0.903 31 H 0.100 0.900 32 H 0.075 0.925 33 H 0.086 0.914 34 H 0.242 0.758 35 H 0.073 0.927 36 H 0.093 0.907 37 H 0.093 0.907 38 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -0.827 0.632 3.636 3.782 hybrid contribution -0.543 -0.887 -0.013 1.040 sum -1.371 -0.255 3.623 3.882 Atomic orbital electron populations 1.86538 1.15546 1.81903 1.49457 1.24909 0.85982 1.10656 0.94789 0.93326 0.78462 0.74758 0.83784 1.21631 0.91209 0.95303 0.98926 1.67395 1.11396 1.27242 1.10364 1.22929 1.00478 0.92264 0.91186 1.22900 0.98068 1.00470 0.97464 1.96851 1.85411 1.79092 1.32157 1.21931 0.96348 1.02124 0.96300 1.19715 0.87905 0.94068 0.92333 1.86369 1.28414 1.52198 1.52121 1.23184 0.92768 0.88942 0.97506 1.21116 0.92364 0.96206 1.00122 0.91259 1.21443 0.95215 0.97304 1.00188 1.21463 0.95270 0.97337 1.01115 1.21936 0.84087 0.94875 0.94912 0.91739 1.86482 1.29865 1.46368 1.77417 1.22211 0.97860 0.98266 1.00138 1.21489 0.94212 0.97650 1.01052 0.76141 0.86762 1.21663 1.22331 0.80015 0.81429 0.91162 0.89944 0.90274 0.89969 0.92451 0.91361 0.75762 0.92667 0.90704 0.90731 0.90597 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.14 10.63 -127.13 -1.35 -1.21 16 2 C -0.05 -0.06 2.92 71.24 0.21 0.15 16 3 Si 0.79 0.81 31.89 68.60 2.19 3.00 16 4 C 0.07 0.14 6.09 42.69 0.26 0.40 16 5 N -0.45 -1.62 8.37 -183.42 -1.54 -3.16 16 6 C 0.09 0.08 10.94 84.71 0.93 1.01 16 7 C -0.11 0.04 6.24 22.39 0.14 0.18 16 8 Br -0.02 0.02 33.73 -20.37 -0.69 -0.66 16 9 C -0.14 0.25 8.90 22.57 0.20 0.45 16 10 C 0.11 0.00 6.56 22.60 0.15 0.15 16 11 O -0.28 0.31 7.41 -70.73 -0.52 -0.21 16 12 C 0.05 -0.28 4.14 71.98 0.30 0.02 16 13 C -0.08 0.36 2.43 -10.79 -0.03 0.33 16 14 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 15 C -0.10 0.59 5.20 30.60 0.16 0.75 16 16 C -0.11 0.15 5.57 30.59 0.17 0.32 16 17 C 0.10 -0.15 3.47 30.59 0.11 -0.05 16 18 H 0.06 -0.24 8.14 -2.38 -0.02 -0.25 16 19 O -0.59 -1.12 13.32 -148.98 -1.98 -3.11 16 20 C -0.15 0.41 5.55 30.59 0.17 0.58 16 21 C -0.11 0.50 5.10 30.60 0.16 0.66 16 22 H 0.39 -2.85 8.70 -74.06 -0.64 -3.50 16 23 H 0.12 0.31 7.96 -2.39 -0.02 0.29 16 24 H -0.29 -2.35 7.11 99.48 0.71 -1.64 16 25 H -0.30 -2.01 7.11 99.48 0.71 -1.30 16 26 H 0.18 -0.48 8.06 -2.91 -0.02 -0.50 16 27 H 0.17 -0.98 6.45 -2.91 -0.02 -1.00 16 28 H 0.07 -0.46 7.70 -2.39 -0.02 -0.48 16 29 H 0.08 -0.71 7.70 -2.39 -0.02 -0.73 16 30 H 0.08 -0.52 8.14 -2.39 -0.02 -0.54 16 31 H 0.08 -0.64 8.14 -2.38 -0.02 -0.66 16 32 H 0.06 0.09 8.14 -2.39 -0.02 0.07 16 33 H 0.07 -0.03 8.14 -2.39 -0.02 -0.05 16 34 H 0.39 -2.31 9.08 -74.05 -0.67 -2.98 16 35 H 0.05 0.05 8.14 -2.38 -0.02 0.03 16 36 H 0.07 -0.34 8.14 -2.39 -0.02 -0.36 16 37 H 0.07 -0.50 8.14 -2.39 -0.02 -0.52 16 38 H 0.08 -0.24 7.82 -2.39 -0.02 -0.26 16 Total: 0.00 -13.72 329.42 -1.17 -14.89 By element: Atomic # 1 Polarization: -14.28 SS G_CDS: -0.19 Total: -14.48 kcal Atomic # 6 Polarization: 2.02 SS G_CDS: 2.92 Total: 4.93 kcal Atomic # 7 Polarization: -1.62 SS G_CDS: -1.54 Total: -3.16 kcal Atomic # 8 Polarization: -0.67 SS G_CDS: -3.86 Total: -4.53 kcal Atomic # 14 Polarization: 0.81 SS G_CDS: 2.19 Total: 3.00 kcal Atomic # 35 Polarization: 0.02 SS G_CDS: -0.69 Total: -0.66 kcal Total: -13.72 -1.17 -14.89 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_13445644_16737256.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -72.664 kcal (2) G-P(sol) polarization free energy of solvation -13.715 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -86.380 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.173 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.888 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.552 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds