Wall clock time and date at job start Mon Mar 8 2021 07:57:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47431 * 2 1 4 4 C 1.50696 * 109.47334 * 120.00617 * 2 1 3 5 5 C 1.38132 * 120.01362 * 254.97938 * 4 2 1 6 6 C 1.38264 * 120.07215 * 180.02562 * 5 4 2 7 7 C 1.38371 * 120.09632 * 359.97438 * 6 5 4 8 8 Cl 1.73598 * 119.98434 * 180.02562 * 7 6 5 9 9 C 1.38288 * 120.02626 * 359.71943 * 7 6 5 10 10 C 1.38687 * 119.93179 * 0.55667 * 9 7 6 11 11 O 1.35895 * 120.04626 * 179.71907 * 10 9 7 12 12 C 1.42897 * 117.00405 * 359.72367 * 11 10 9 13 13 C 1.53001 * 109.47209 * 179.97438 * 12 11 10 14 14 H 1.08992 * 109.47514 * 305.00520 * 13 12 11 15 15 C 1.53002 * 109.46637 * 65.00391 * 13 12 11 16 16 C 1.52997 * 109.46817 * 179.97438 * 15 13 12 17 17 C 1.53005 * 109.47452 * 300.00239 * 16 15 13 18 18 H 1.09002 * 109.46935 * 300.00125 * 17 16 15 19 19 O 1.42900 * 109.47304 * 180.02562 * 17 16 15 20 20 C 1.52999 * 109.47159 * 59.99536 * 17 16 15 21 21 C 1.52997 * 109.47317 * 300.00546 * 20 17 16 22 22 H 0.96698 * 114.00094 * 179.97438 * 1 2 3 23 23 H 1.09005 * 109.46731 * 240.00034 * 2 1 3 24 24 H 1.48501 * 109.99804 * 58.68459 * 3 2 1 25 25 H 1.48507 * 109.99741 * 180.02562 * 3 2 1 26 26 H 1.08003 * 119.96596 * 0.03556 * 5 4 2 27 27 H 1.08002 * 119.95520 * 179.97438 * 6 5 4 28 28 H 1.08003 * 120.03253 * 180.27289 * 9 7 6 29 29 H 1.09008 * 109.46889 * 60.00059 * 12 11 10 30 30 H 1.09000 * 109.47092 * 300.00371 * 12 11 10 31 31 H 1.08993 * 109.47662 * 299.99908 * 15 13 12 32 32 H 1.09002 * 109.47075 * 60.00414 * 15 13 12 33 33 H 1.09002 * 109.47153 * 60.00231 * 16 15 13 34 34 H 1.09001 * 109.47289 * 180.02562 * 16 15 13 35 35 H 0.96700 * 113.99696 * 179.97438 * 19 17 16 36 36 H 1.08996 * 109.46929 * 179.97438 * 20 17 16 37 37 H 1.09002 * 109.46716 * 60.00455 * 20 17 16 38 38 H 1.09002 * 109.47153 * 299.99641 * 21 20 17 39 39 H 1.09001 * 109.46832 * 179.97438 * 21 20 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7105 1.2303 5 6 2.4539 0.0158 2.2827 6 6 2.9157 -0.6349 3.4119 7 6 2.8551 -2.0150 3.4910 8 17 3.4351 -2.8290 4.9104 9 6 2.3269 -2.7457 2.4425 10 6 1.8686 -2.0946 1.3069 11 8 1.3544 -2.8108 0.2728 12 6 1.3217 -4.2317 0.4204 13 6 0.7136 -4.8611 -0.8346 14 1 -0.2655 -4.4211 -1.0238 15 6 1.6301 -4.5995 -2.0315 16 6 1.0224 -5.2293 -3.2864 17 6 0.8727 -6.7378 -3.0786 18 1 1.8520 -7.1774 -2.8893 19 8 0.3056 -7.3262 -4.2509 20 6 -0.0437 -6.9993 -1.8817 21 6 0.5640 -6.3695 -0.6268 22 1 -0.3933 -0.8834 -0.0004 23 1 1.7923 -0.5139 -0.8901 24 1 1.5356 2.4770 1.1922 25 1 3.5351 1.7700 -0.0006 26 1 2.5018 1.0931 2.2235 27 1 3.3243 -0.0652 4.2334 28 1 2.2755 -3.8226 2.5059 29 1 0.7154 -4.4930 1.2878 30 1 2.3359 -4.6059 0.5601 31 1 1.7371 -3.5249 -2.1793 32 1 2.6093 -5.0395 -1.8423 33 1 0.0431 -4.7897 -3.4757 34 1 1.6755 -5.0434 -4.1390 35 1 0.1822 -8.2833 -4.1902 36 1 -0.1507 -8.0739 -1.7340 37 1 -1.0230 -6.5597 -2.0711 38 1 1.5433 -6.8091 -0.4374 39 1 -0.0892 -6.5555 0.2258 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_13616172_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:57:01 Heat of formation + Delta-G solvation = -118.477473 kcal Electronic energy + Delta-G solvation = -22472.577507 eV Core-core repulsion = 18985.955194 eV Total energy + Delta-G solvation = -3486.622313 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 299.101 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -41.74076 -40.28478 -38.88335 -37.92894 -37.10894 -36.72940 -32.74825 -32.22714 -31.98675 -30.91184 -27.01859 -26.63954 -24.13028 -23.70130 -22.84348 -22.12349 -21.00858 -19.53628 -18.34563 -18.27037 -17.72264 -17.33290 -16.80669 -16.59055 -16.12122 -15.80493 -15.59948 -15.37971 -15.15400 -14.89636 -14.40851 -14.31766 -13.96706 -13.79991 -13.58824 -13.37115 -13.23317 -13.07988 -12.74238 -12.44832 -12.23076 -12.19893 -12.07064 -11.97172 -11.86117 -11.66588 -11.29612 -11.21973 -11.00700 -10.82497 -10.07483 -9.41200 -4.82320 -0.16339 0.09804 0.95699 1.36914 1.65606 1.85586 1.94934 2.33303 3.07908 3.41125 3.46457 3.49368 3.53536 3.66595 3.80230 3.83217 3.87562 3.95855 4.01319 4.08184 4.14932 4.21762 4.23746 4.31681 4.33799 4.35735 4.37213 4.56396 4.64845 4.77810 4.81607 4.90191 4.93350 4.99800 5.00519 5.07574 5.09752 5.16868 5.28434 5.35572 6.07895 6.58695 6.64051 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.073 4.073 3 Si 0.746 3.254 4 C -0.140 4.140 5 C -0.071 4.071 6 C -0.140 4.140 7 C 0.009 3.991 8 Cl -0.058 7.058 9 C -0.199 4.199 10 C 0.157 3.843 11 O -0.305 6.305 12 C 0.060 3.940 13 C -0.087 4.087 14 H 0.087 0.913 15 C -0.111 4.111 16 C -0.113 4.113 17 C 0.103 3.897 18 H 0.054 0.946 19 O -0.568 6.568 20 C -0.150 4.150 21 C -0.111 4.111 22 H 0.366 0.634 23 H 0.077 0.923 24 H -0.251 1.251 25 H -0.248 1.248 26 H 0.138 0.862 27 H 0.140 0.860 28 H 0.142 0.858 29 H 0.067 0.933 30 H 0.067 0.933 31 H 0.078 0.922 32 H 0.064 0.936 33 H 0.072 0.928 34 H 0.072 0.928 35 H 0.379 0.621 36 H 0.069 0.931 37 H 0.074 0.926 38 H 0.068 0.932 39 H 0.071 0.929 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.246 -1.925 -1.086 2.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.182 4.182 3 Si 0.644 3.356 4 C -0.141 4.141 5 C -0.088 4.088 6 C -0.159 4.159 7 C -0.018 4.018 8 Cl -0.029 7.029 9 C -0.218 4.218 10 C 0.111 3.889 11 O -0.218 6.218 12 C -0.015 4.015 13 C -0.105 4.105 14 H 0.105 0.895 15 C -0.148 4.148 16 C -0.151 4.151 17 C 0.044 3.956 18 H 0.072 0.928 19 O -0.374 6.374 20 C -0.188 4.188 21 C -0.148 4.148 22 H 0.214 0.786 23 H 0.095 0.905 24 H -0.176 1.176 25 H -0.173 1.173 26 H 0.155 0.845 27 H 0.158 0.842 28 H 0.160 0.840 29 H 0.085 0.915 30 H 0.085 0.915 31 H 0.096 0.904 32 H 0.083 0.917 33 H 0.091 0.909 34 H 0.091 0.909 35 H 0.226 0.774 36 H 0.087 0.913 37 H 0.092 0.908 38 H 0.087 0.913 39 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 0.789 -0.093 -0.926 1.220 hybrid contribution 0.111 -2.638 1.380 2.980 sum 0.900 -2.732 0.455 2.912 Atomic orbital electron populations 1.86722 1.16814 1.33276 1.97082 1.25186 0.84902 1.13287 0.94825 0.92967 0.78518 0.76430 0.87654 1.19825 1.04840 0.90815 0.98608 1.20840 0.96305 0.99666 0.92020 1.20968 1.03155 0.92305 0.99497 1.20696 0.99245 0.92643 0.89253 1.98405 1.86950 1.79224 1.38342 1.21135 1.06000 1.01010 0.93662 1.18550 0.93298 0.90413 0.86649 1.86046 1.77173 1.20129 1.38474 1.23021 1.01465 0.77599 0.99409 1.21235 1.00599 0.95395 0.93279 0.89461 1.21541 0.98332 1.01740 0.93216 1.21480 1.02386 0.93059 0.98152 1.21849 0.94992 0.94438 0.84332 0.92761 1.86535 1.85671 1.26304 1.38877 1.22243 1.00403 1.01183 0.94959 1.21456 1.01796 0.93452 0.98133 0.78615 0.90519 1.17619 1.17265 0.84460 0.84195 0.84012 0.91460 0.91524 0.90367 0.91695 0.90943 0.90941 0.77410 0.91278 0.90753 0.91326 0.91060 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.86 12.65 -35.23 -0.45 -1.31 16 2 C -0.07 -0.06 2.33 36.00 0.08 0.02 16 3 Si 0.75 -0.14 30.40 -169.99 -5.17 -5.31 16 4 C -0.14 -0.25 5.28 -104.47 -0.55 -0.80 16 5 C -0.07 -0.12 8.65 -39.61 -0.34 -0.46 16 6 C -0.14 -0.20 9.83 -39.52 -0.39 -0.58 16 7 C 0.01 0.01 6.32 -39.51 -0.25 -0.24 16 8 Cl -0.06 -0.08 28.95 -51.86 -1.50 -1.58 16 9 C -0.20 -0.19 8.82 -39.40 -0.35 -0.53 16 10 C 0.16 0.19 6.62 -39.22 -0.26 -0.07 16 11 O -0.30 0.01 8.57 -19.41 -0.17 -0.16 16 12 C 0.06 -0.12 4.12 37.16 0.15 0.04 16 13 C -0.09 0.20 2.43 -90.62 -0.22 -0.02 16 14 H 0.09 -0.16 8.14 -51.93 -0.42 -0.58 16 15 C -0.11 0.18 5.10 -26.73 -0.14 0.05 16 16 C -0.11 0.07 5.57 -26.73 -0.15 -0.08 16 17 C 0.10 -0.09 3.47 -26.73 -0.09 -0.18 16 18 H 0.05 -0.07 8.14 -51.93 -0.42 -0.50 16 19 O -0.57 -0.31 13.32 -35.23 -0.47 -0.78 16 20 C -0.15 0.32 5.55 -26.73 -0.15 0.17 16 21 C -0.11 0.32 5.20 -26.73 -0.14 0.18 16 22 H 0.37 -0.09 8.60 45.56 0.39 0.31 16 23 H 0.08 0.00 7.83 -51.93 -0.41 -0.41 16 24 H -0.25 -0.50 6.81 56.52 0.38 -0.11 16 25 H -0.25 -0.28 7.11 56.52 0.40 0.12 16 26 H 0.14 0.13 4.93 -52.48 -0.26 -0.13 16 27 H 0.14 -0.03 8.06 -52.49 -0.42 -0.45 16 28 H 0.14 -0.10 6.30 -52.48 -0.33 -0.43 16 29 H 0.07 -0.17 7.65 -51.92 -0.40 -0.57 16 30 H 0.07 -0.16 7.67 -51.93 -0.40 -0.56 16 31 H 0.08 -0.08 7.82 -51.93 -0.41 -0.49 16 32 H 0.06 -0.11 8.14 -51.93 -0.42 -0.54 16 33 H 0.07 0.01 8.14 -51.93 -0.42 -0.41 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.38 -1.26 9.08 45.56 0.41 -0.84 16 36 H 0.07 -0.20 8.14 -51.93 -0.42 -0.62 16 37 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 38 H 0.07 -0.21 8.14 -51.93 -0.42 -0.64 16 39 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 LS Contribution 328.33 15.07 4.95 4.95 Total: 0.00 -4.73 328.33 -10.43 -15.15 By element: Atomic # 1 Polarization: -3.61 SS G_CDS: -4.83 Total: -8.44 kcal Atomic # 6 Polarization: 0.27 SS G_CDS: -2.79 Total: -2.52 kcal Atomic # 8 Polarization: -1.17 SS G_CDS: -1.08 Total: -2.25 kcal Atomic # 14 Polarization: -0.14 SS G_CDS: -5.17 Total: -5.31 kcal Atomic # 17 Polarization: -0.08 SS G_CDS: -1.50 Total: -1.58 kcal Total LS contribution 4.95 Total: 4.95 kcal Total: -4.73 -10.43 -15.15 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_13616172_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -103.324 kcal (2) G-P(sol) polarization free energy of solvation -4.728 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.052 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.425 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.153 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.477 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds