Wall clock time and date at job start Mon Mar 8 2021 09:30:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50693 * 1 3 3 C 1.38709 * 120.03025 * 2 1 4 4 O 1.35906 * 120.05198 * 0.02562 * 3 2 1 5 5 C 1.42901 * 117.00155 * 180.02562 * 4 3 2 6 6 C 1.52991 * 109.47372 * 180.02562 * 5 4 3 7 7 H 1.08999 * 112.84861 * 43.80495 * 6 5 4 8 8 C 1.53780 * 113.61827 * 174.99988 * 6 5 4 9 9 C 1.53778 * 87.08307 * 139.97983 * 8 6 5 10 10 H 1.09004 * 113.61179 * 89.12212 * 9 8 6 11 11 O 1.42901 * 113.61540 * 219.93459 * 9 8 6 12 12 C 1.53774 * 87.08203 * 334.56944 * 9 8 6 13 13 C 1.38755 * 119.89505 * 180.02562 * 3 2 1 14 14 C 1.38125 * 119.93999 * 0.25905 * 13 3 2 15 15 C 1.50698 * 119.96886 * 179.72536 * 14 13 3 16 16 O 1.42898 * 109.47286 * 64.99752 * 15 14 13 17 17 Si 1.86303 * 109.46733 * 184.99666 * 15 14 13 18 18 C 1.38289 * 120.05202 * 359.48967 * 14 13 3 19 19 C 1.38167 * 120.03230 * 180.02562 * 2 1 3 20 20 H 1.09000 * 109.47146 * 89.99918 * 1 2 3 21 21 H 1.09006 * 109.47104 * 209.99762 * 1 2 3 22 22 H 1.08997 * 109.47215 * 329.99873 * 1 2 3 23 23 H 1.09003 * 109.47208 * 300.00726 * 5 4 3 24 24 H 1.09006 * 109.47043 * 60.00389 * 5 4 3 25 25 H 1.08995 * 113.61936 * 254.53630 * 8 6 5 26 26 H 1.09003 * 113.61072 * 25.35263 * 8 6 5 27 27 H 0.96709 * 113.99648 * 179.97438 * 11 9 8 28 28 H 1.08999 * 113.61771 * 270.88078 * 12 9 8 29 29 H 1.09002 * 113.61376 * 139.97553 * 12 9 8 30 30 H 1.08002 * 120.02789 * 179.97438 * 13 3 2 31 31 H 1.08996 * 109.46823 * 304.99236 * 15 14 13 32 32 H 0.96703 * 113.99779 * 179.97438 * 16 15 14 33 33 H 1.48504 * 109.99853 * 178.67944 * 17 15 14 34 34 H 1.48503 * 110.00006 * 299.99870 * 17 15 14 35 35 H 1.08001 * 119.93832 * 180.25972 * 18 14 13 36 36 H 1.08006 * 119.96869 * 359.97438 * 19 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5069 0.0000 0.0000 3 6 2.2011 1.2009 0.0000 4 8 1.5233 2.3788 0.0005 5 6 2.3033 3.5762 -0.0001 6 6 1.3731 4.7909 0.0013 7 1 0.5410 4.6860 0.6975 8 6 2.1130 6.1334 0.1236 9 6 1.1146 6.6878 -0.9063 10 1 0.2110 7.1022 -0.4592 11 8 1.7096 7.5625 -1.8670 12 6 0.9481 5.2430 -1.4058 13 6 3.5887 1.1976 -0.0005 14 6 4.2752 -0.0009 -0.0065 15 6 5.7822 -0.0052 -0.0133 16 8 6.2657 0.5600 1.2068 17 14 6.3973 -1.7564 -0.1732 18 6 3.5808 -1.1968 -0.0012 19 6 2.1984 -1.1962 -0.0005 20 1 -0.3633 0.0000 -1.0277 21 1 -0.3633 -0.8901 0.5138 22 1 -0.3633 0.8899 0.5138 23 1 2.9329 3.6002 0.8894 24 1 2.9314 3.6002 -0.8906 25 1 2.0249 6.5925 1.1082 26 1 3.1410 6.0998 -0.2373 27 1 1.0866 7.9141 -2.5177 28 1 1.6571 4.9663 -2.1860 29 1 -0.0806 4.9832 -1.6557 30 1 4.1313 2.1314 -0.0010 31 1 6.1433 0.5851 -0.8555 32 1 7.2301 0.5890 1.2718 33 1 7.8818 -1.7716 -0.2133 34 1 5.9117 -2.5717 0.9690 35 1 4.1195 -2.1329 -0.0017 36 1 1.6584 -2.1315 -0.0005 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_13826624_11354860.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:30:18 Heat of formation + Delta-G solvation = -70.060122 kcal Electronic energy + Delta-G solvation = -18361.033000 eV Core-core repulsion = 15391.847632 eV Total energy + Delta-G solvation = -2969.185368 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 251.124 amu Computer time = 0.41 seconds Orbital eigenvalues (eV) -41.42165 -40.34694 -38.76504 -37.54251 -36.03200 -34.01857 -31.18941 -29.34914 -29.12856 -26.80933 -25.18829 -24.27727 -22.70453 -21.90901 -20.55750 -18.72367 -18.55224 -18.43412 -17.30021 -16.96296 -16.73688 -16.33440 -15.92179 -15.56362 -15.19163 -14.79789 -14.48764 -14.22983 -13.97934 -13.87768 -13.52419 -13.32363 -13.08825 -12.83650 -12.70010 -12.55264 -12.38670 -12.16416 -11.85878 -11.71834 -11.55448 -11.27480 -10.81186 -10.51388 -9.68652 -9.03232 -4.96179 0.29558 0.49582 1.27101 1.59390 1.94890 2.15903 2.67087 3.18862 3.33890 3.40013 3.49334 3.71326 3.73666 3.84500 3.88694 4.05044 4.15388 4.19258 4.24974 4.26847 4.39251 4.47640 4.58108 4.69935 4.70244 4.71040 4.76308 4.84239 4.90656 4.91949 5.05533 5.27976 5.29437 5.35434 5.50721 5.57968 5.84593 6.41048 6.47337 6.64946 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.106 4.106 2 C -0.112 4.112 3 C 0.129 3.871 4 O -0.308 6.308 5 C 0.071 3.929 6 C -0.109 4.109 7 H 0.105 0.895 8 C -0.121 4.121 9 C 0.076 3.924 10 H 0.085 0.915 11 O -0.560 6.560 12 C -0.163 4.163 13 C -0.178 4.178 14 C -0.040 4.040 15 C -0.078 4.078 16 O -0.536 6.536 17 Si 0.687 3.313 18 C -0.149 4.149 19 C -0.078 4.078 20 H 0.070 0.930 21 H 0.066 0.934 22 H 0.070 0.930 23 H 0.065 0.935 24 H 0.065 0.935 25 H 0.080 0.920 26 H 0.093 0.907 27 H 0.380 0.620 28 H 0.091 0.909 29 H 0.074 0.926 30 H 0.129 0.871 31 H 0.075 0.925 32 H 0.379 0.621 33 H -0.262 1.262 34 H -0.254 1.254 35 H 0.128 0.872 36 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.128 -0.110 -2.522 2.765 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.163 4.163 2 C -0.112 4.112 3 C 0.084 3.916 4 O -0.222 6.222 5 C -0.004 4.004 6 C -0.127 4.127 7 H 0.124 0.876 8 C -0.158 4.158 9 C 0.017 3.983 10 H 0.103 0.897 11 O -0.366 6.366 12 C -0.200 4.200 13 C -0.197 4.197 14 C -0.040 4.040 15 C -0.188 4.188 16 O -0.343 6.343 17 Si 0.588 3.412 18 C -0.167 4.167 19 C -0.096 4.096 20 H 0.088 0.912 21 H 0.085 0.915 22 H 0.089 0.911 23 H 0.083 0.917 24 H 0.083 0.917 25 H 0.099 0.901 26 H 0.112 0.888 27 H 0.228 0.772 28 H 0.109 0.891 29 H 0.093 0.907 30 H 0.147 0.853 31 H 0.093 0.907 32 H 0.227 0.773 33 H -0.187 1.187 34 H -0.179 1.179 35 H 0.146 0.854 36 H 0.152 0.848 Dipole moment (debyes) X Y Z Total from point charges -0.966 -0.784 -1.697 2.104 hybrid contribution 0.550 0.951 0.394 1.167 sum -0.416 0.167 -1.303 1.378 Atomic orbital electron populations 1.20629 0.90222 1.02944 1.02485 1.19338 0.96738 0.90247 1.04915 1.18795 0.90157 0.85740 0.96896 1.86055 1.35642 1.12065 1.88445 1.22812 0.93779 0.82136 1.01682 1.22315 0.99339 0.92020 0.99024 0.87639 1.23067 0.99797 0.93733 0.99210 1.23292 0.96262 0.88372 0.90379 0.89747 1.86526 1.39689 1.65675 1.44697 1.23768 1.02776 0.96669 0.96814 1.21040 0.92593 0.98971 1.07101 1.18984 0.93006 0.93021 0.99001 1.24848 0.94463 1.10355 0.89124 1.86597 1.26503 1.83204 1.37995 0.94911 0.80111 0.76608 0.89554 1.20876 0.94571 0.96931 1.04306 1.20834 0.93484 0.97135 0.98137 0.91163 0.91499 0.91111 0.91669 0.91691 0.90133 0.88838 0.77203 0.89083 0.90740 0.85340 0.90675 0.77274 1.18704 1.17897 0.85423 0.84758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 -0.07 9.79 36.00 0.35 0.29 16 2 C -0.11 -0.25 5.89 -104.48 -0.62 -0.87 16 3 C 0.13 0.40 6.66 -39.22 -0.26 0.13 16 4 O -0.31 -0.80 9.18 -19.44 -0.18 -0.98 16 5 C 0.07 0.04 4.58 37.15 0.17 0.21 16 6 C -0.11 0.05 4.01 -89.81 -0.36 -0.31 16 7 H 0.11 -0.07 8.14 -51.93 -0.42 -0.49 16 8 C -0.12 0.06 7.47 -25.92 -0.19 -0.13 16 9 C 0.08 -0.04 5.21 -25.92 -0.14 -0.17 16 10 H 0.08 -0.15 8.14 -51.93 -0.42 -0.58 16 11 O -0.56 -0.40 13.67 -35.23 -0.48 -0.88 16 12 C -0.16 0.09 7.47 -25.92 -0.19 -0.11 16 13 C -0.18 -0.50 8.67 -39.43 -0.34 -0.84 16 14 C -0.04 -0.09 5.38 -104.65 -0.56 -0.66 16 15 C -0.08 -0.06 2.79 36.00 0.10 0.04 16 16 O -0.54 -1.02 12.81 -35.23 -0.45 -1.47 16 17 Si 0.69 -0.24 29.85 -169.99 -5.07 -5.32 16 18 C -0.15 -0.23 8.67 -39.56 -0.34 -0.58 16 19 C -0.08 -0.10 9.70 -39.61 -0.38 -0.48 16 20 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 21 H 0.07 -0.04 8.09 -51.93 -0.42 -0.46 16 22 H 0.07 0.09 7.53 -51.93 -0.39 -0.30 16 23 H 0.07 0.02 7.66 -51.93 -0.40 -0.37 16 24 H 0.06 0.01 7.37 -51.93 -0.38 -0.37 16 25 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.09 0.00 8.10 -51.93 -0.42 -0.42 16 27 H 0.38 -1.26 9.12 45.56 0.42 -0.84 16 28 H 0.09 0.01 7.90 -51.93 -0.41 -0.40 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 30 H 0.13 0.24 6.30 -52.49 -0.33 -0.09 16 31 H 0.08 -0.07 7.96 -51.93 -0.41 -0.48 16 32 H 0.38 -0.84 8.74 45.56 0.40 -0.44 16 33 H -0.26 -0.39 7.11 56.52 0.40 0.01 16 34 H -0.25 -0.68 7.04 56.52 0.40 -0.29 16 35 H 0.13 -0.03 4.86 -52.49 -0.26 -0.28 16 36 H 0.13 -0.15 8.06 -52.48 -0.42 -0.57 16 LS Contribution 298.35 15.07 4.50 4.50 Total: 0.00 -6.61 298.35 -8.80 -15.42 By element: Atomic # 1 Polarization: -3.45 SS G_CDS: -4.35 Total: -7.79 kcal Atomic # 6 Polarization: -0.71 SS G_CDS: -2.77 Total: -3.48 kcal Atomic # 8 Polarization: -2.21 SS G_CDS: -1.11 Total: -3.33 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: -5.07 Total: -5.32 kcal Total LS contribution 4.50 Total: 4.50 kcal Total: -6.61 -8.80 -15.42 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_13826624_11354860.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.643 kcal (2) G-P(sol) polarization free energy of solvation -6.614 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.803 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.417 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.060 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.41 seconds