Wall clock time and date at job start Mon Mar 8 2021 08:30:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42902 * 113.99532 * 2 1 4 4 C 1.52998 * 112.85272 * 65.90138 * 3 2 1 5 5 F 1.39905 * 109.46951 * 283.58062 * 4 3 2 6 6 F 1.39899 * 109.47321 * 43.57909 * 4 3 2 7 7 F 1.39900 * 109.47472 * 163.58753 * 4 3 2 8 8 C 1.53779 * 113.61260 * 294.69875 * 3 2 1 9 9 C 1.53778 * 87.08381 * 270.88659 * 8 3 2 10 10 H 1.09000 * 113.61171 * 219.93558 * 9 8 3 11 11 C 1.53002 * 113.61476 * 89.11828 * 9 8 3 12 12 O 1.42897 * 109.46960 * 175.00027 * 11 9 8 13 13 C 1.35904 * 116.99639 * 179.97438 * 12 11 9 14 14 C 1.38719 * 120.05536 * 359.72924 * 13 12 11 15 15 C 1.38168 * 119.93858 * 179.67127 * 14 13 12 16 16 C 1.50697 * 119.96759 * 180.31620 * 15 14 13 17 17 O 1.42902 * 109.46919 * 120.30626 * 16 15 14 18 18 Si 1.86297 * 109.47232 * 0.30607 * 16 15 14 19 19 C 1.38243 * 120.05845 * 0.62569 * 15 14 13 20 20 C 1.38289 * 120.11130 * 359.66985 * 19 15 14 21 21 C 1.50694 * 119.97511 * 180.02562 * 20 19 15 22 22 C 1.53005 * 109.47196 * 119.97835 * 21 20 19 23 23 C 1.53000 * 109.47635 * 239.97924 * 21 20 19 24 24 C 1.38125 * 120.05706 * 0.02562 * 20 19 15 25 25 C 1.53777 * 87.08031 * 334.56799 * 9 8 3 26 26 H 1.08996 * 109.47521 * 296.89803 * 1 2 3 27 27 H 1.09002 * 109.47249 * 56.90705 * 1 2 3 28 28 H 1.09000 * 109.47092 * 176.90215 * 1 2 3 29 29 H 1.09004 * 113.61457 * 156.33743 * 8 3 2 30 30 H 1.08995 * 113.69242 * 25.45033 * 8 3 2 31 31 H 1.09005 * 109.46701 * 295.00138 * 11 9 8 32 32 H 1.08995 * 109.46852 * 54.99336 * 11 9 8 33 33 H 1.07998 * 120.02382 * 359.97438 * 14 13 12 34 34 H 1.09004 * 109.47021 * 240.30220 * 16 15 14 35 35 H 0.96696 * 114.00137 * 180.02562 * 17 16 15 36 36 H 1.48501 * 110.00439 * 59.99812 * 18 16 15 37 37 H 1.48504 * 109.99668 * 181.31639 * 18 16 15 38 38 H 1.07998 * 119.94487 * 179.70158 * 19 15 14 39 39 H 1.09004 * 109.46976 * 359.97438 * 21 20 19 40 40 H 1.08995 * 109.46966 * 60.00205 * 22 21 20 41 41 H 1.09002 * 109.46977 * 180.02562 * 22 21 20 42 42 H 1.08998 * 109.47239 * 300.00178 * 22 21 20 43 43 H 1.09002 * 109.47352 * 179.97438 * 23 21 20 44 44 H 1.08995 * 109.47038 * 300.00108 * 23 21 20 45 45 H 1.09006 * 109.46905 * 59.99712 * 23 21 20 46 46 H 1.07995 * 120.03206 * 179.97438 * 24 20 19 47 47 H 1.09006 * 113.61373 * 139.98142 * 25 9 8 48 48 H 1.08998 * 113.61817 * 270.88268 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0101 1.3055 0.0000 4 6 1.7258 2.0825 1.2870 5 9 0.4090 2.5544 1.2655 6 9 1.9010 1.2390 2.3893 7 9 2.6074 3.1645 1.3830 8 6 1.7227 2.1077 -1.2801 9 6 2.9994 1.4813 -1.8653 10 1 3.5961 2.1768 -2.4555 11 6 2.7568 0.1509 -2.5811 12 8 3.9725 -0.2922 -3.1876 13 6 3.9296 -1.4678 -3.8682 14 6 2.7434 -2.1828 -3.9458 15 6 2.7009 -3.3743 -4.6440 16 6 1.4108 -4.1479 -4.7347 17 8 1.0358 -4.2896 -6.1064 18 14 0.0725 -3.2337 -3.8163 19 6 3.8421 -3.8604 -5.2541 20 6 5.0274 -3.1526 -5.1731 21 6 6.2695 -3.6851 -5.8397 22 6 6.7636 -2.6758 -6.8782 23 6 7.3575 -3.9082 -4.7875 24 6 5.0737 -1.9578 -4.4815 25 6 3.4903 1.3209 -0.4168 26 1 -0.3634 0.4649 0.9164 27 1 -0.3634 0.5611 -0.8610 28 1 -0.3633 -1.0262 -0.0555 29 1 1.7892 3.1871 -1.1432 30 1 0.8113 1.8015 -1.7935 31 1 2.4182 -0.5931 -1.8601 32 1 1.9953 0.2853 -3.3493 33 1 1.8528 -1.8059 -3.4649 34 1 1.5469 -5.1345 -4.2915 35 1 0.2123 -4.7783 -6.2405 36 1 -0.1228 -1.8870 -4.4108 37 1 -1.1971 -4.0021 -3.8713 38 1 3.8080 -4.7943 -5.7954 39 1 6.0408 -4.6304 -6.3319 40 1 6.9922 -1.7306 -6.3860 41 1 7.6618 -3.0613 -7.3607 42 1 5.9885 -2.5169 -7.6279 43 1 8.2558 -4.2938 -5.2697 44 1 7.5862 -2.9629 -4.2953 45 1 7.0055 -4.6272 -4.0476 46 1 5.9996 -1.4055 -4.4181 47 1 4.0057 0.3783 -0.2323 48 1 4.0400 2.1850 -0.0438 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_13973558_17321602.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:30:54 Heat of formation + Delta-G solvation = -213.572866 kcal Electronic energy + Delta-G solvation = -34226.341652 eV Core-core repulsion = 29220.420702 eV Total energy + Delta-G solvation = -5005.920951 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.159 amu Computer time = 1.25 seconds Orbital eigenvalues (eV) -51.16593 -48.71317 -48.59793 -41.82724 -41.06793 -39.10570 -37.98472 -37.17860 -35.85890 -32.24678 -30.82590 -30.18235 -28.33752 -28.01772 -27.54073 -26.89981 -26.63011 -24.18887 -23.30259 -22.73397 -20.89474 -20.26716 -19.79492 -19.46063 -19.19189 -18.68619 -18.57122 -17.40223 -17.33975 -17.07623 -16.82370 -16.56222 -15.93871 -15.77232 -15.68954 -15.53976 -15.49433 -15.42300 -15.09702 -14.97994 -14.83849 -14.78514 -14.65584 -14.48047 -14.25751 -14.14085 -13.90476 -13.82638 -13.37806 -13.22065 -13.17903 -13.02528 -12.91100 -12.78001 -12.53789 -12.35240 -12.08078 -12.04893 -11.88897 -11.79623 -11.69650 -11.68483 -11.45469 -10.88271 -10.53414 -9.68737 -9.08136 -5.05643 0.27558 0.52072 1.20393 1.50464 1.55059 1.86285 1.96408 2.04806 2.53560 2.62093 2.67473 2.85180 3.22771 3.26964 3.35178 3.45725 3.60252 3.64346 3.81491 3.98994 4.02944 4.04653 4.13035 4.15801 4.22332 4.24509 4.29030 4.30776 4.34914 4.38540 4.46296 4.47234 4.56098 4.58035 4.60709 4.67963 4.72596 4.76070 4.87759 4.91028 4.95702 5.07633 5.13526 5.29732 5.32961 5.35192 5.51211 5.59514 5.72650 5.80323 6.38177 6.46257 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.007 3.993 2 O -0.331 6.331 3 C 0.039 3.961 4 C 0.437 3.563 5 F -0.182 7.182 6 F -0.174 7.174 7 F -0.175 7.175 8 C -0.144 4.144 9 C -0.098 4.098 10 H 0.107 0.893 11 C 0.066 3.934 12 O -0.309 6.309 13 C 0.142 3.858 14 C -0.208 4.208 15 C -0.031 4.031 16 C -0.076 4.076 17 O -0.533 6.533 18 Si 0.673 3.327 19 C -0.126 4.126 20 C -0.036 4.036 21 C -0.057 4.057 22 C -0.146 4.146 23 C -0.145 4.145 24 C -0.142 4.142 25 C -0.111 4.111 26 H 0.054 0.946 27 H 0.055 0.945 28 H 0.105 0.895 29 H 0.113 0.887 30 H 0.094 0.906 31 H 0.087 0.913 32 H 0.065 0.935 33 H 0.130 0.870 34 H 0.079 0.921 35 H 0.380 0.620 36 H -0.254 1.254 37 H -0.258 1.258 38 H 0.125 0.875 39 H 0.081 0.919 40 H 0.059 0.941 41 H 0.060 0.940 42 H 0.056 0.944 43 H 0.060 0.940 44 H 0.059 0.941 45 H 0.057 0.943 46 H 0.133 0.867 47 H 0.100 0.900 48 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.487 -0.952 0.061 1.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 O -0.248 6.248 3 C -0.004 4.004 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.182 4.182 9 C -0.116 4.116 10 H 0.125 0.875 11 C -0.009 4.009 12 O -0.223 6.223 13 C 0.096 3.904 14 C -0.227 4.227 15 C -0.032 4.032 16 C -0.186 4.186 17 O -0.340 6.340 18 Si 0.574 3.426 19 C -0.145 4.145 20 C -0.036 4.036 21 C -0.076 4.076 22 C -0.203 4.203 23 C -0.203 4.203 24 C -0.160 4.160 25 C -0.148 4.148 26 H 0.073 0.927 27 H 0.073 0.927 28 H 0.123 0.877 29 H 0.131 0.869 30 H 0.113 0.887 31 H 0.105 0.895 32 H 0.083 0.917 33 H 0.147 0.853 34 H 0.097 0.903 35 H 0.228 0.772 36 H -0.178 1.178 37 H -0.183 1.183 38 H 0.143 0.857 39 H 0.099 0.901 40 H 0.078 0.922 41 H 0.079 0.921 42 H 0.076 0.924 43 H 0.079 0.921 44 H 0.078 0.922 45 H 0.076 0.924 46 H 0.150 0.850 47 H 0.119 0.881 48 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -0.474 -0.243 0.000 0.533 hybrid contribution -1.140 -0.353 -0.583 1.329 sum -1.614 -0.597 -0.583 1.817 Atomic orbital electron populations 1.23185 0.79538 1.04560 1.01623 1.88089 1.21087 1.21828 1.93838 1.24049 1.00121 0.86341 0.89874 1.21169 0.74296 0.78731 0.87554 1.93193 1.36951 1.89374 1.96824 1.93222 1.94953 1.70671 1.56638 1.93181 1.68895 1.56977 1.96571 1.23607 0.99642 1.01186 0.93739 1.22064 0.97463 0.96480 0.95639 0.87524 1.22778 0.85585 0.95811 0.96700 1.86029 1.35309 1.35333 1.65604 1.18731 0.93633 0.85400 0.92607 1.20938 0.97732 0.97361 1.06630 1.18924 0.93709 0.93755 0.96769 1.24777 1.01428 1.04084 0.88275 1.86595 1.45321 1.79013 1.23119 0.95201 0.77535 0.80062 0.89764 1.20788 0.91381 1.01016 1.01278 1.19687 0.94929 0.93339 0.95627 1.20169 0.92224 0.99237 0.95943 1.21874 1.01161 0.98883 0.98396 1.21874 0.97748 1.02211 0.98433 1.20248 0.97139 0.97252 1.01367 1.23264 0.90817 1.05878 0.94849 0.92728 0.92667 0.87681 0.86900 0.88726 0.89517 0.91710 0.85311 0.90330 0.77236 1.17838 1.18290 0.85710 0.90109 0.92242 0.92082 0.92444 0.92111 0.92217 0.92363 0.84959 0.88098 0.86529 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.33 101.05 1.04 1.03 16 2 O -0.33 0.23 8.35 -35.23 -0.29 -0.07 16 3 C 0.04 -0.04 0.85 -89.81 -0.08 -0.12 16 4 C 0.44 0.28 2.51 37.16 0.09 0.37 16 5 F -0.18 -0.17 15.37 2.25 0.03 -0.14 16 6 F -0.17 -0.40 17.09 2.25 0.04 -0.37 16 7 F -0.17 -0.15 15.83 2.25 0.04 -0.11 16 8 C -0.14 0.38 6.51 -25.92 -0.17 0.21 16 9 C -0.10 0.20 4.20 -89.81 -0.38 -0.18 16 10 H 0.11 -0.25 8.14 -51.93 -0.42 -0.68 16 11 C 0.07 -0.05 4.32 37.16 0.16 0.11 16 12 O -0.31 -0.48 10.14 -19.44 -0.20 -0.67 16 13 C 0.14 0.30 6.69 -39.21 -0.26 0.04 16 14 C -0.21 -0.34 7.66 -39.43 -0.30 -0.64 16 15 C -0.03 -0.06 5.42 -104.65 -0.57 -0.63 16 16 C -0.08 -0.03 2.81 36.00 0.10 0.07 16 17 O -0.53 -0.74 12.74 -35.23 -0.45 -1.19 16 18 Si 0.67 -0.43 29.79 -169.99 -5.06 -5.50 16 19 C -0.13 -0.26 9.23 -39.56 -0.37 -0.63 16 20 C -0.04 -0.05 4.78 -104.65 -0.50 -0.56 16 21 C -0.06 0.00 3.09 -91.77 -0.28 -0.29 16 22 C -0.15 0.02 9.01 37.16 0.33 0.36 16 23 C -0.15 0.08 9.01 37.16 0.33 0.41 16 24 C -0.14 -0.26 8.65 -39.43 -0.34 -0.60 16 25 C -0.11 0.19 6.89 -25.92 -0.18 0.01 16 26 H 0.05 -0.09 6.60 -51.93 -0.34 -0.43 16 27 H 0.05 -0.20 6.60 -51.93 -0.34 -0.54 16 28 H 0.10 -0.44 8.14 -51.93 -0.42 -0.86 16 29 H 0.11 -0.38 8.06 -51.93 -0.42 -0.80 16 30 H 0.09 -0.32 6.65 -51.93 -0.35 -0.67 16 31 H 0.09 -0.08 5.63 -51.93 -0.29 -0.37 16 32 H 0.06 -0.07 7.68 -51.93 -0.40 -0.47 16 33 H 0.13 0.00 3.12 -52.49 -0.16 -0.17 16 34 H 0.08 -0.10 7.96 -51.93 -0.41 -0.52 16 35 H 0.38 -1.02 8.74 45.56 0.40 -0.62 16 36 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 37 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 38 H 0.12 0.18 7.94 -52.49 -0.42 -0.24 16 39 H 0.08 -0.02 7.87 -51.93 -0.41 -0.43 16 40 H 0.06 -0.01 7.39 -51.93 -0.38 -0.39 16 41 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 43 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 44 H 0.06 -0.03 7.38 -51.93 -0.38 -0.41 16 45 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 46 H 0.13 0.12 7.10 -52.49 -0.37 -0.26 16 47 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 48 H 0.12 -0.29 7.01 -51.93 -0.36 -0.65 16 LS Contribution 388.17 15.07 5.85 5.85 Total: 0.00 -5.85 388.17 -8.20 -14.05 By element: Atomic # 1 Polarization: -4.03 SS G_CDS: -6.80 Total: -10.83 kcal Atomic # 6 Polarization: 0.33 SS G_CDS: -1.35 Total: -1.03 kcal Atomic # 8 Polarization: -0.99 SS G_CDS: -0.94 Total: -1.93 kcal Atomic # 9 Polarization: -0.72 SS G_CDS: 0.11 Total: -0.61 kcal Atomic # 14 Polarization: -0.43 SS G_CDS: -5.06 Total: -5.50 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -5.85 -8.20 -14.05 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_13973558_17321602.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -199.524 kcal (2) G-P(sol) polarization free energy of solvation -5.847 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -205.371 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.049 kcal (6) G-S(sol) free energy of system = (1) + (5) -213.573 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.25 seconds