Wall clock time and date at job start Mon Mar 8 2021 11:52:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47082 * 2 1 4 4 C 1.50700 * 109.47174 * 119.99914 * 2 1 3 5 5 C 1.38230 * 119.96811 * 255.00441 * 4 2 1 6 6 C 1.38270 * 120.14090 * 180.02562 * 5 4 2 7 7 C 1.38346 * 120.07161 * 359.97020 * 6 5 4 8 8 F 1.35099 * 120.04042 * 180.02562 * 7 6 5 9 9 C 1.38856 * 119.92793 * 0.02562 * 7 6 5 10 10 O 1.36015 * 120.06780 * 179.97438 * 9 7 6 11 11 C 1.42901 * 116.99667 * 90.00237 * 10 9 7 12 12 C 1.52998 * 109.47046 * 179.97438 * 11 10 9 13 13 H 1.09001 * 112.85113 * 316.19867 * 12 11 10 14 14 C 1.53784 * 113.61217 * 87.50260 * 12 11 10 15 15 C 1.53784 * 87.07978 * 139.98032 * 14 12 11 16 16 H 1.09004 * 113.61200 * 89.11728 * 15 14 12 17 17 O 1.42907 * 113.61331 * 220.01651 * 15 14 12 18 18 C 1.53772 * 87.08217 * 334.56883 * 15 14 12 19 19 C 1.38400 * 119.96450 * 75.25617 * 4 2 1 20 20 F 1.35100 * 120.03444 * 359.97438 * 19 4 2 21 21 H 0.96695 * 114.00512 * 299.99781 * 1 2 3 22 22 H 1.08995 * 109.47359 * 239.99877 * 2 1 3 23 23 H 1.48498 * 110.00055 * 178.67926 * 3 2 1 24 24 H 1.48498 * 110.00120 * 299.99945 * 3 2 1 25 25 H 1.08001 * 119.93004 * 0.02562 * 5 4 2 26 26 H 1.08004 * 119.96318 * 180.02562 * 6 5 4 27 27 H 1.08996 * 109.47352 * 299.99799 * 11 10 9 28 28 H 1.08999 * 109.47144 * 59.99823 * 11 10 9 29 29 H 1.09005 * 113.61624 * 254.52715 * 14 12 11 30 30 H 1.08999 * 113.61579 * 25.43342 * 14 12 11 31 31 H 0.96702 * 113.99780 * 277.49476 * 17 15 14 32 32 H 1.09005 * 113.61440 * 270.88039 * 18 15 14 33 33 H 1.08998 * 113.69157 * 139.99622 * 18 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4536 0.0175 2.2831 6 6 2.9160 -0.6306 3.4136 7 6 2.8567 -2.0104 3.4947 8 9 3.3082 -2.6431 4.5997 9 6 2.3325 -2.7445 2.4390 10 8 2.2733 -4.1012 2.5154 11 6 1.0855 -4.6683 3.0720 12 6 1.2017 -6.1939 3.0748 13 1 1.6066 -6.5893 2.1432 14 6 1.8830 -6.7575 4.3330 15 6 0.8393 -7.8864 4.2968 16 1 1.1460 -8.7454 3.7000 17 8 0.3473 -8.2528 5.5874 18 6 -0.0771 -6.9083 3.5430 19 6 1.8740 -2.0913 1.3032 20 9 1.3677 -2.8023 0.2721 21 1 -0.3934 0.4416 0.7650 22 1 1.7923 -0.5138 -0.8899 23 1 3.5345 1.7703 0.0322 24 1 1.5615 2.4679 -1.2085 25 1 2.5006 1.0948 2.2225 26 1 3.3231 -0.0590 4.2346 27 1 0.9568 -4.3116 4.0938 28 1 0.2253 -4.3709 2.4722 29 1 2.9032 -7.1003 4.1608 30 1 1.7948 -6.1092 5.2048 31 1 0.9195 -8.8679 6.0664 32 1 -0.7013 -6.3012 4.1988 33 1 -0.6400 -7.3716 2.7327 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_14032924_11354860.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:52:50 Heat of formation + Delta-G solvation = -150.177997 kcal Electronic energy + Delta-G solvation = -21241.565876 eV Core-core repulsion = 17485.536004 eV Total energy + Delta-G solvation = -3756.029872 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.090 amu Computer time = 2.42 seconds Orbital eigenvalues (eV) -50.09844 -50.04327 -41.05278 -40.35327 -39.01197 -37.45347 -36.02518 -32.33779 -31.58739 -29.05773 -26.91030 -26.78146 -24.36416 -23.53712 -22.92285 -20.65794 -19.59660 -19.00338 -18.79942 -18.59511 -17.94568 -17.45324 -16.81971 -16.58441 -16.42552 -16.15103 -16.13745 -15.83870 -15.72690 -15.52706 -14.81599 -14.74134 -14.24735 -14.08586 -13.49944 -13.48601 -13.28415 -13.03271 -12.59149 -12.44338 -12.32929 -12.17070 -11.97188 -11.47035 -11.06846 -10.79370 -10.60364 -10.00248 -9.94858 -5.19123 -0.46892 -0.34130 1.08945 1.52094 1.80155 1.86912 2.28836 2.62899 3.13801 3.20968 3.25140 3.34465 3.40661 3.50126 3.53132 3.70493 3.75819 3.86639 4.10888 4.18398 4.22065 4.28690 4.43776 4.53161 4.56523 4.61882 4.67445 4.72778 4.73398 4.80654 4.93019 5.07056 5.24555 5.35107 6.18298 6.41967 6.67118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.533 6.533 2 C -0.069 4.069 3 Si 0.694 3.306 4 C -0.157 4.157 5 C -0.061 4.061 6 C -0.146 4.146 7 C 0.118 3.882 8 F -0.119 7.119 9 C 0.028 3.972 10 O -0.316 6.316 11 C 0.075 3.925 12 C -0.108 4.108 13 H 0.106 0.894 14 C -0.162 4.162 15 C 0.076 3.924 16 H 0.085 0.915 17 O -0.560 6.560 18 C -0.120 4.120 19 C 0.138 3.862 20 F -0.114 7.114 21 H 0.379 0.621 22 H 0.117 0.883 23 H -0.252 1.252 24 H -0.249 1.249 25 H 0.153 0.847 26 H 0.155 0.845 27 H 0.061 0.939 28 H 0.061 0.939 29 H 0.074 0.926 30 H 0.091 0.909 31 H 0.380 0.620 32 H 0.093 0.907 33 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.028 2.919 2.618 3.921 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.179 4.179 3 Si 0.594 3.406 4 C -0.158 4.158 5 C -0.079 4.079 6 C -0.165 4.165 7 C 0.098 3.902 8 F -0.097 7.097 9 C -0.018 4.018 10 O -0.232 6.232 11 C 0.001 3.999 12 C -0.127 4.127 13 H 0.124 0.876 14 C -0.200 4.200 15 C 0.017 3.983 16 H 0.103 0.897 17 O -0.366 6.366 18 C -0.157 4.157 19 C 0.117 3.883 20 F -0.092 7.092 21 H 0.227 0.773 22 H 0.135 0.865 23 H -0.176 1.176 24 H -0.174 1.174 25 H 0.170 0.830 26 H 0.173 0.827 27 H 0.079 0.921 28 H 0.079 0.921 29 H 0.092 0.908 30 H 0.110 0.890 31 H 0.228 0.772 32 H 0.112 0.888 33 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 0.180 3.395 1.403 3.678 hybrid contribution 0.489 -1.247 0.031 1.340 sum 0.670 2.148 1.434 2.668 Atomic orbital electron populations 1.86579 1.16525 1.81644 1.49102 1.25100 0.85692 1.10656 0.96470 0.94956 0.81212 0.76559 0.87871 1.20498 1.04150 0.91984 0.99208 1.20764 0.95765 1.00022 0.91352 1.21173 1.03003 0.91802 1.00516 1.17822 0.98731 0.90507 0.83107 1.91568 1.86067 1.82334 1.49752 1.18610 1.04924 0.84947 0.93323 1.86168 1.40316 1.13998 1.82755 1.22914 0.85828 0.93277 0.97862 1.22309 0.98332 0.92254 0.99758 0.87589 1.23771 0.99398 0.98822 0.98013 1.23290 0.94898 0.95141 0.84944 0.89717 1.86523 1.51836 1.68184 1.30027 1.23065 0.96086 0.97063 0.99501 1.17564 0.96564 0.88832 0.85301 1.91564 1.84007 1.78041 1.55593 0.77322 0.86522 1.17608 1.17368 0.83039 0.82709 0.92070 0.92062 0.90756 0.89036 0.77203 0.88832 0.90070 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.05 12.88 -35.23 -0.45 -0.40 16 2 C -0.07 0.04 2.45 36.01 0.09 0.13 16 3 Si 0.69 -1.69 29.91 -169.99 -5.08 -6.78 16 4 C -0.16 0.06 5.26 -104.57 -0.55 -0.49 16 5 C -0.06 0.16 8.65 -39.57 -0.34 -0.18 16 6 C -0.15 0.27 10.02 -39.53 -0.40 -0.13 16 7 C 0.12 0.13 7.31 -39.31 -0.29 -0.16 16 8 F -0.12 -0.28 17.11 2.25 0.04 -0.24 16 9 C 0.03 0.07 5.74 -39.14 -0.22 -0.16 16 10 O -0.32 -1.06 9.79 -19.79 -0.19 -1.26 16 11 C 0.08 0.09 5.90 37.16 0.22 0.31 16 12 C -0.11 -0.04 4.01 -89.81 -0.36 -0.40 16 13 H 0.11 0.03 8.14 -51.93 -0.42 -0.39 16 14 C -0.16 -0.04 7.46 -25.92 -0.19 -0.23 16 15 C 0.08 0.00 5.21 -25.92 -0.14 -0.14 16 16 H 0.09 -0.11 8.14 -51.93 -0.42 -0.54 16 17 O -0.56 -0.61 13.67 -35.23 -0.48 -1.09 16 18 C -0.12 0.00 7.47 -25.92 -0.19 -0.19 16 19 C 0.14 0.29 7.25 -39.31 -0.29 0.00 16 20 F -0.11 -0.45 16.59 2.25 0.04 -0.42 16 21 H 0.38 -1.74 8.70 45.56 0.40 -1.35 16 22 H 0.12 0.06 7.89 -51.93 -0.41 -0.35 16 23 H -0.25 0.04 7.11 56.52 0.40 0.45 16 24 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 25 H 0.15 -0.89 5.12 -52.49 -0.27 -1.16 16 26 H 0.16 -0.66 8.06 -52.48 -0.42 -1.09 16 27 H 0.06 0.05 7.84 -51.93 -0.41 -0.36 16 28 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 29 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.09 0.08 7.90 -51.93 -0.41 -0.33 16 31 H 0.38 -1.12 9.12 45.56 0.42 -0.70 16 32 H 0.09 0.04 8.10 -51.93 -0.42 -0.38 16 33 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 LS Contribution 294.35 15.07 4.44 4.44 Total: 0.00 -7.49 294.35 -7.20 -14.69 By element: Atomic # 1 Polarization: -4.48 SS G_CDS: -2.84 Total: -7.32 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -2.66 Total: -1.63 kcal Atomic # 8 Polarization: -1.62 SS G_CDS: -1.13 Total: -2.75 kcal Atomic # 9 Polarization: -0.73 SS G_CDS: 0.08 Total: -0.65 kcal Atomic # 14 Polarization: -1.69 SS G_CDS: -5.08 Total: -6.78 kcal Total LS contribution 4.44 Total: 4.44 kcal Total: -7.49 -7.20 -14.69 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_14032924_11354860.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.488 kcal (2) G-P(sol) polarization free energy of solvation -7.489 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.976 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.202 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.178 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.42 seconds