Wall clock time and date at job start Mon Mar 8 2021 11:52:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86298 * 109.47082 * 2 1 4 4 C 1.50700 * 109.47174 * 119.99914 * 2 1 3 5 5 C 1.38230 * 119.96811 * 255.00441 * 4 2 1 6 6 C 1.38270 * 120.14090 * 180.02562 * 5 4 2 7 7 C 1.38346 * 120.07161 * 359.97020 * 6 5 4 8 8 F 1.35099 * 120.04042 * 180.02562 * 7 6 5 9 9 C 1.38856 * 119.92793 * 0.02562 * 7 6 5 10 10 O 1.36015 * 120.06780 * 179.97438 * 9 7 6 11 11 C 1.42901 * 116.99667 * 90.00237 * 10 9 7 12 12 C 1.52998 * 109.47046 * 179.97438 * 11 10 9 13 13 H 1.09001 * 112.85113 * 316.19867 * 12 11 10 14 14 C 1.53784 * 113.61217 * 87.50260 * 12 11 10 15 15 C 1.53784 * 87.07978 * 139.98032 * 14 12 11 16 16 H 1.09004 * 113.61200 * 89.11728 * 15 14 12 17 17 O 1.42907 * 113.61331 * 220.01651 * 15 14 12 18 18 C 1.53772 * 87.08217 * 334.56883 * 15 14 12 19 19 C 1.38400 * 119.96450 * 75.25617 * 4 2 1 20 20 F 1.35100 * 120.03444 * 359.97438 * 19 4 2 21 21 H 0.96695 * 114.00512 * 299.99781 * 1 2 3 22 22 H 1.08995 * 109.47359 * 239.99877 * 2 1 3 23 23 H 1.48498 * 110.00055 * 178.67926 * 3 2 1 24 24 H 1.48498 * 110.00120 * 299.99945 * 3 2 1 25 25 H 1.08001 * 119.93004 * 0.02562 * 5 4 2 26 26 H 1.08004 * 119.96318 * 180.02562 * 6 5 4 27 27 H 1.08996 * 109.47352 * 299.99799 * 11 10 9 28 28 H 1.08999 * 109.47144 * 59.99823 * 11 10 9 29 29 H 1.09005 * 113.61624 * 254.52715 * 14 12 11 30 30 H 1.08999 * 113.61579 * 25.43342 * 14 12 11 31 31 H 0.96702 * 113.99780 * 277.49476 * 17 15 14 32 32 H 1.09005 * 113.61440 * 270.88039 * 18 15 14 33 33 H 1.08998 * 113.69157 * 139.99622 * 18 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4536 0.0175 2.2831 6 6 2.9160 -0.6306 3.4136 7 6 2.8567 -2.0104 3.4947 8 9 3.3082 -2.6431 4.5997 9 6 2.3325 -2.7445 2.4390 10 8 2.2733 -4.1012 2.5154 11 6 1.0855 -4.6683 3.0720 12 6 1.2017 -6.1939 3.0748 13 1 1.6066 -6.5893 2.1432 14 6 1.8830 -6.7575 4.3330 15 6 0.8393 -7.8864 4.2968 16 1 1.1460 -8.7454 3.7000 17 8 0.3473 -8.2528 5.5874 18 6 -0.0771 -6.9083 3.5430 19 6 1.8740 -2.0913 1.3032 20 9 1.3677 -2.8023 0.2721 21 1 -0.3934 0.4416 0.7650 22 1 1.7923 -0.5138 -0.8899 23 1 3.5345 1.7703 0.0322 24 1 1.5615 2.4679 -1.2085 25 1 2.5006 1.0948 2.2225 26 1 3.3231 -0.0590 4.2346 27 1 0.9568 -4.3116 4.0938 28 1 0.2253 -4.3709 2.4722 29 1 2.9032 -7.1003 4.1608 30 1 1.7948 -6.1092 5.2048 31 1 0.9195 -8.8679 6.0664 32 1 -0.7013 -6.3012 4.1988 33 1 -0.6400 -7.3716 2.7327 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_14032924_11354860.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 11:52:43 Heat of formation + Delta-G solvation = -150.792097 kcal Electronic energy + Delta-G solvation = -21241.592505 eV Core-core repulsion = 17485.536004 eV Total energy + Delta-G solvation = -3756.056502 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.090 amu Computer time = 1.71 seconds Orbital eigenvalues (eV) -50.22667 -50.16867 -41.09974 -40.35105 -39.05766 -37.42263 -36.06477 -32.31695 -31.58352 -29.12318 -26.88303 -26.80340 -24.35843 -23.56350 -22.93554 -20.68936 -19.65437 -19.05589 -18.83618 -18.62305 -17.95679 -17.53745 -16.86655 -16.64463 -16.48386 -16.22181 -16.17009 -15.90244 -15.67453 -15.57935 -14.84968 -14.68912 -14.32825 -14.04835 -13.54164 -13.53282 -13.25882 -13.01133 -12.61366 -12.46640 -12.28874 -12.17324 -11.98875 -11.50634 -11.13958 -10.80687 -10.54950 -10.01846 -9.95294 -5.02222 -0.45346 -0.33393 1.21514 1.67964 1.83814 2.00227 2.27326 2.58497 3.16275 3.24584 3.30403 3.37632 3.47600 3.50283 3.62534 3.73181 3.81710 3.86900 4.10126 4.16246 4.17454 4.24715 4.42823 4.55275 4.60608 4.68135 4.69710 4.72382 4.74513 4.86821 4.91203 5.05397 5.27404 5.37099 6.09037 6.72061 6.83370 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.088 4.088 3 Si 0.811 3.189 4 C -0.153 4.153 5 C -0.048 4.048 6 C -0.128 4.128 7 C 0.100 3.900 8 F -0.131 7.131 9 C 0.008 3.992 10 O -0.336 6.336 11 C 0.076 3.924 12 C -0.107 4.107 13 H 0.105 0.895 14 C -0.160 4.160 15 C 0.078 3.922 16 H 0.101 0.899 17 O -0.580 6.580 18 C -0.120 4.120 19 C 0.109 3.891 20 F -0.135 7.135 21 H 0.398 0.602 22 H 0.096 0.904 23 H -0.274 1.274 24 H -0.299 1.299 25 H 0.193 0.807 26 H 0.188 0.812 27 H 0.061 0.939 28 H 0.059 0.941 29 H 0.076 0.924 30 H 0.082 0.918 31 H 0.396 0.604 32 H 0.087 0.913 33 H 0.089 0.911 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.303 4.388 3.438 5.583 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.195 4.195 3 Si 0.714 3.286 4 C -0.154 4.154 5 C -0.065 4.065 6 C -0.146 4.146 7 C 0.080 3.920 8 F -0.109 7.109 9 C -0.037 4.037 10 O -0.254 6.254 11 C 0.002 3.998 12 C -0.126 4.126 13 H 0.123 0.877 14 C -0.198 4.198 15 C 0.019 3.981 16 H 0.119 0.881 17 O -0.388 6.388 18 C -0.158 4.158 19 C 0.088 3.912 20 F -0.113 7.113 21 H 0.249 0.751 22 H 0.114 0.886 23 H -0.200 1.200 24 H -0.227 1.227 25 H 0.210 0.790 26 H 0.206 0.794 27 H 0.079 0.921 28 H 0.077 0.923 29 H 0.094 0.906 30 H 0.100 0.900 31 H 0.246 0.754 32 H 0.105 0.895 33 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges 0.500 4.829 2.260 5.355 hybrid contribution 0.368 -1.687 -0.265 1.747 sum 0.867 3.142 1.995 3.821 Atomic orbital electron populations 1.86536 1.16894 1.82326 1.50536 1.25485 0.85715 1.12683 0.95634 0.93746 0.77754 0.71932 0.85190 1.20697 1.03766 0.90994 0.99989 1.21183 0.93703 1.01719 0.89855 1.21577 1.01174 0.90481 1.01398 1.18094 0.99630 0.91668 0.82630 1.91533 1.86356 1.82811 1.50206 1.18859 1.06035 0.84691 0.94152 1.86120 1.41102 1.15035 1.83099 1.22955 0.85393 0.93823 0.97654 1.22301 0.98775 0.91669 0.99815 0.87659 1.23726 0.99667 0.98918 0.97494 1.23355 0.94391 0.95479 0.84836 0.88141 1.86477 1.52835 1.68886 1.30619 1.23072 0.95931 0.97070 0.99704 1.17895 0.98224 0.89912 0.85120 1.91500 1.84611 1.78700 1.56489 0.75112 0.88625 1.20010 1.22746 0.79022 0.79431 0.92083 0.92294 0.90567 0.89954 0.75384 0.89466 0.89223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.06 12.88 -148.98 -1.92 -1.98 16 2 C -0.09 0.10 2.45 71.24 0.17 0.27 16 3 Si 0.81 -5.11 29.91 68.60 2.05 -3.06 16 4 C -0.15 0.13 5.26 -19.83 -0.10 0.02 16 5 C -0.05 0.35 8.65 22.28 0.19 0.55 16 6 C -0.13 0.71 10.02 22.30 0.22 0.93 16 7 C 0.10 0.24 7.31 22.44 0.16 0.41 16 8 F -0.13 -0.70 17.11 44.97 0.77 0.06 16 9 C 0.01 0.05 5.74 22.55 0.13 0.18 16 10 O -0.34 -3.06 9.79 -93.72 -0.92 -3.98 16 11 C 0.08 0.35 5.90 71.98 0.42 0.78 16 12 C -0.11 -0.24 4.01 -10.27 -0.04 -0.28 16 13 H 0.11 0.23 8.14 -2.39 -0.02 0.21 16 14 C -0.16 -0.25 7.46 31.12 0.23 -0.02 16 15 C 0.08 0.03 5.21 31.12 0.16 0.19 16 16 H 0.10 -0.29 8.14 -2.39 -0.02 -0.31 16 17 O -0.58 -1.42 13.67 -148.98 -2.04 -3.46 16 18 C -0.12 -0.11 7.47 31.12 0.23 0.12 16 19 C 0.11 0.64 7.25 22.45 0.16 0.80 16 20 F -0.13 -1.45 16.59 44.97 0.75 -0.71 16 21 H 0.40 -3.92 8.70 -74.06 -0.64 -4.56 16 22 H 0.10 0.26 7.89 -2.39 -0.02 0.24 16 23 H -0.27 0.66 7.11 99.48 0.71 1.37 16 24 H -0.30 -0.65 7.11 99.48 0.71 0.06 16 25 H 0.19 -3.04 5.12 -2.91 -0.01 -3.06 16 26 H 0.19 -2.27 8.06 -2.91 -0.02 -2.29 16 27 H 0.06 0.24 7.84 -2.39 -0.02 0.22 16 28 H 0.06 0.26 8.14 -2.39 -0.02 0.24 16 29 H 0.08 0.08 8.14 -2.38 -0.02 0.06 16 30 H 0.08 0.28 7.90 -2.39 -0.02 0.26 16 31 H 0.40 -2.29 9.12 -74.06 -0.68 -2.96 16 32 H 0.09 0.19 8.10 -2.38 -0.02 0.17 16 33 H 0.09 -0.09 8.14 -2.39 -0.02 -0.11 16 Total: 0.00 -20.16 294.35 0.53 -19.63 By element: Atomic # 1 Polarization: -10.35 SS G_CDS: -0.12 Total: -10.47 kcal Atomic # 6 Polarization: 1.99 SS G_CDS: 1.95 Total: 3.95 kcal Atomic # 8 Polarization: -4.54 SS G_CDS: -4.87 Total: -9.41 kcal Atomic # 9 Polarization: -2.16 SS G_CDS: 1.52 Total: -0.64 kcal Atomic # 14 Polarization: -5.11 SS G_CDS: 2.05 Total: -3.06 kcal Total: -20.16 0.53 -19.63 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_14032924_11354860.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.166 kcal (2) G-P(sol) polarization free energy of solvation -20.157 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.323 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.531 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.626 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.71 seconds