Wall clock time and date at job start Mon Mar 8 2021 08:01:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52993 * 1 3 3 C 1.53003 * 109.47274 * 2 1 4 4 C 1.53005 * 109.47245 * 239.99989 * 2 1 3 5 5 O 1.42901 * 109.47329 * 119.99794 * 2 1 3 6 6 C 1.42898 * 114.00093 * 60.00150 * 5 2 1 7 7 H 1.09005 * 112.84621 * 341.19619 * 6 5 2 8 8 C 1.53955 * 113.74639 * 112.40253 * 6 5 2 9 9 C 1.53777 * 87.01968 * 139.94823 * 8 6 5 10 10 H 1.08996 * 113.61949 * 89.23461 * 9 8 6 11 11 C 1.53003 * 113.61000 * 220.05028 * 9 8 6 12 12 O 1.42899 * 109.47059 * 274.13264 * 11 9 8 13 13 C 1.36015 * 116.99851 * 179.97438 * 12 11 9 14 14 C 1.38810 * 120.07130 * 269.72622 * 13 12 11 15 15 F 1.35102 * 120.03635 * 0.02562 * 14 13 12 16 16 C 1.38394 * 119.93024 * 179.79053 * 14 13 12 17 17 C 1.50702 * 119.96801 * 180.22772 * 16 14 13 18 18 O 1.42899 * 109.47317 * 285.23729 * 17 16 14 19 19 Si 1.86299 * 109.46989 * 165.23343 * 17 16 14 20 20 C 1.38240 * 120.06918 * 0.46601 * 16 14 13 21 21 C 1.38275 * 120.13506 * 359.78902 * 20 16 14 22 22 C 1.38349 * 120.07146 * 359.97438 * 21 20 16 23 23 F 1.35097 * 120.03180 * 179.97438 * 22 21 20 24 24 C 1.53777 * 113.61693 * 210.00496 * 6 5 2 25 25 H 1.08997 * 109.47440 * 299.99918 * 1 2 3 26 26 H 1.09001 * 109.47662 * 60.00160 * 1 2 3 27 27 H 1.09002 * 109.47172 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47170 * 180.02562 * 3 2 1 29 29 H 1.09004 * 109.46958 * 300.00055 * 3 2 1 30 30 H 1.08997 * 109.46820 * 59.99703 * 3 2 1 31 31 H 1.09002 * 109.46849 * 299.99969 * 4 2 1 32 32 H 1.08995 * 109.47252 * 60.00012 * 4 2 1 33 33 H 1.09001 * 109.46905 * 180.02562 * 4 2 1 34 34 H 1.08996 * 113.61144 * 25.41984 * 8 6 5 35 35 H 1.09009 * 113.66428 * 254.47723 * 8 6 5 36 36 H 1.09003 * 109.47131 * 154.13359 * 11 9 8 37 37 H 1.09000 * 109.47592 * 34.13507 * 11 9 8 38 38 H 1.09001 * 109.46400 * 45.23732 * 17 16 14 39 39 H 0.96694 * 113.99741 * 179.97438 * 18 17 16 40 40 H 1.48497 * 110.00105 * 298.68268 * 19 17 16 41 41 H 1.48494 * 110.00061 * 60.00518 * 19 17 16 42 42 H 1.07991 * 119.92887 * 179.76167 * 20 16 14 43 43 H 1.07998 * 119.95913 * 180.02562 * 21 20 16 44 44 H 1.08996 * 113.61702 * 105.38196 * 24 6 5 45 45 H 1.08998 * 113.69101 * 334.49017 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2493 5 8 2.0063 -0.6736 1.1668 6 6 1.5847 -2.0355 1.2646 7 1 0.7236 -2.2582 0.6345 8 6 2.7321 -3.0516 1.1192 9 6 2.0541 -3.8564 2.2405 10 1 1.3213 -4.5776 1.8787 11 6 3.0396 -4.4624 3.2418 12 8 3.4993 -5.7243 2.7536 13 6 4.3884 -6.4000 3.5301 14 6 5.7517 -6.2011 3.3604 15 9 6.1974 -5.3354 2.4239 16 6 6.6537 -6.8870 4.1550 17 6 8.1338 -6.6679 3.9750 18 8 8.5722 -7.3292 2.7866 19 14 9.0471 -7.3600 5.4439 20 6 6.1985 -7.7765 5.1102 21 6 4.8413 -7.9807 5.2780 22 6 3.9344 -7.2945 4.4902 23 9 2.6085 -7.4950 4.6544 24 6 1.4332 -2.5310 2.7124 25 1 -0.3634 0.5138 0.8899 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 3.1299 1.4425 -0.0005 29 1 1.6766 1.9564 -0.8900 30 1 1.6766 1.9563 0.8899 31 1 1.6766 -1.7489 -1.2492 32 1 1.6767 -0.2075 -2.1392 33 1 3.1300 -0.7216 -1.2490 34 1 3.7073 -2.6516 1.3969 35 1 2.7425 -3.5653 0.1578 36 1 2.5420 -4.6034 4.2014 37 1 3.8886 -3.7906 3.3681 38 1 8.3354 -5.5999 3.8920 39 1 9.5172 -7.2301 2.6072 40 1 8.6232 -6.6584 6.6822 41 1 8.7803 -8.8155 5.5681 42 1 6.9045 -8.3134 5.7264 43 1 4.4888 -8.6761 6.0254 44 1 0.3965 -2.6251 3.0355 45 1 2.0519 -1.9892 3.4277 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_14032924_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:01:02 Heat of formation + Delta-G solvation = -150.714100 kcal Electronic energy + Delta-G solvation = -28774.847168 eV Core-core repulsion = 24396.643573 eV Total energy + Delta-G solvation = -4378.203595 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 329.152 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -50.08447 -50.01605 -41.14046 -40.62877 -39.26973 -38.11672 -37.36959 -33.89758 -32.44263 -31.57202 -29.21750 -28.38995 -28.23804 -26.84908 -26.62415 -24.38396 -23.61844 -22.82430 -20.86440 -20.61643 -19.49328 -18.94902 -18.67595 -18.55211 -17.83309 -17.28361 -16.91079 -16.62416 -16.48946 -16.35339 -16.22056 -15.98919 -15.75383 -15.52953 -15.34081 -15.02192 -14.54149 -14.39346 -14.24991 -14.01580 -13.75294 -13.47387 -13.39803 -13.32666 -13.13342 -13.04137 -12.95108 -12.80964 -12.66663 -12.40515 -12.30060 -12.12634 -12.04752 -11.69813 -11.55721 -11.26003 -10.97791 -10.46970 -10.32976 -9.98364 -9.92906 -5.11748 -0.45668 -0.31582 1.08927 1.50367 1.77212 1.84718 2.25396 2.63132 2.78319 3.08266 3.20979 3.42728 3.48936 3.56117 3.56827 3.76549 3.80002 3.81499 3.88929 3.96503 4.01857 4.08085 4.15247 4.22376 4.30655 4.43058 4.49013 4.55802 4.56580 4.56826 4.64815 4.69990 4.75361 4.76373 4.80284 4.81745 4.83528 4.89004 4.92001 5.02350 5.10469 5.15287 5.27201 5.30397 5.32426 5.39543 6.20773 6.42650 6.50565 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.092 0.908 8 C -0.146 4.146 9 C -0.108 4.108 10 H 0.105 0.895 11 C 0.075 3.925 12 O -0.313 6.313 13 C 0.031 3.969 14 C 0.141 3.859 15 F -0.112 7.112 16 C -0.110 4.110 17 C -0.074 4.074 18 O -0.542 6.542 19 Si 0.695 3.305 20 C -0.070 4.070 21 C -0.146 4.146 22 C 0.119 3.881 23 F -0.118 7.118 24 C -0.126 4.126 25 H 0.065 0.935 26 H 0.068 0.932 27 H 0.059 0.941 28 H 0.063 0.937 29 H 0.070 0.930 30 H 0.063 0.937 31 H 0.058 0.942 32 H 0.066 0.934 33 H 0.064 0.936 34 H 0.091 0.909 35 H 0.073 0.927 36 H 0.060 0.940 37 H 0.061 0.939 38 H 0.078 0.922 39 H 0.386 0.614 40 H -0.250 1.250 41 H -0.246 1.246 42 H 0.145 0.855 43 H 0.154 0.846 44 H 0.078 0.922 45 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.900 1.117 1.563 3.479 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.280 6.280 6 C 0.005 3.995 7 H 0.110 0.890 8 C -0.184 4.184 9 C -0.127 4.127 10 H 0.123 0.877 11 C 0.001 3.999 12 O -0.230 6.230 13 C -0.015 4.015 14 C 0.120 3.880 15 F -0.090 7.090 16 C -0.112 4.112 17 C -0.184 4.184 18 O -0.348 6.348 19 Si 0.595 3.405 20 C -0.088 4.088 21 C -0.165 4.165 22 C 0.099 3.901 23 F -0.096 7.096 24 C -0.164 4.164 25 H 0.084 0.916 26 H 0.087 0.913 27 H 0.078 0.922 28 H 0.082 0.918 29 H 0.089 0.911 30 H 0.082 0.918 31 H 0.077 0.923 32 H 0.085 0.915 33 H 0.084 0.916 34 H 0.109 0.891 35 H 0.091 0.909 36 H 0.078 0.922 37 H 0.079 0.921 38 H 0.096 0.904 39 H 0.234 0.766 40 H -0.175 1.175 41 H -0.170 1.170 42 H 0.162 0.838 43 H 0.172 0.828 44 H 0.096 0.904 45 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges 2.190 0.646 2.233 3.193 hybrid contribution -0.813 0.212 -0.495 0.975 sum 1.377 0.858 1.738 2.378 Atomic orbital electron populations 1.22470 0.95660 1.02459 1.03060 1.21542 0.93094 0.93252 0.85557 1.21768 1.02030 0.93214 1.02584 1.22472 1.02355 1.00787 0.97786 1.88031 1.73779 1.23363 1.42876 1.23601 0.97073 0.81829 0.97038 0.88983 1.23631 0.99389 0.96364 0.99028 1.22300 0.97924 0.95788 0.96663 0.87717 1.22920 0.97010 0.82645 0.97320 1.86178 1.58894 1.33718 1.44229 1.18560 0.87961 0.98755 0.96253 1.17502 0.90259 0.91296 0.88917 1.91556 1.89383 1.66291 1.61787 1.19434 0.94559 0.99265 0.97912 1.24644 0.93500 1.01229 0.99055 1.86512 1.30143 1.75698 1.42494 0.94793 0.89968 0.80299 0.75425 1.20782 0.95392 0.95791 0.96837 1.21117 0.92195 1.01833 1.01308 1.17777 0.78628 0.98062 0.95646 1.91564 1.30280 1.93473 1.94320 1.23220 1.01799 0.94203 0.97134 0.91617 0.91342 0.92226 0.91756 0.91063 0.91778 0.92272 0.91529 0.91643 0.89090 0.90867 0.92165 0.92114 0.90414 0.76615 1.17451 1.17040 0.83798 0.82814 0.90355 0.88855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.03 8.38 37.15 0.31 0.34 16 2 C 0.10 0.08 1.11 -90.62 -0.10 -0.02 16 3 C -0.14 -0.03 8.84 37.16 0.33 0.30 16 4 C -0.18 -0.03 8.38 37.16 0.31 0.28 16 5 O -0.36 -0.86 10.00 -35.23 -0.35 -1.21 16 6 C 0.06 0.05 2.82 -25.83 -0.07 -0.02 16 7 H 0.09 0.00 5.54 -51.93 -0.29 -0.29 16 8 C -0.15 -0.18 7.48 -25.83 -0.19 -0.37 16 9 C -0.11 -0.09 4.00 -89.81 -0.36 -0.45 16 10 H 0.10 0.07 8.14 -51.93 -0.42 -0.35 16 11 C 0.07 0.13 5.89 37.16 0.22 0.35 16 12 O -0.31 -1.32 9.79 -19.79 -0.19 -1.51 16 13 C 0.03 0.12 5.74 -39.14 -0.22 -0.11 16 14 C 0.14 0.51 7.25 -39.31 -0.29 0.22 16 15 F -0.11 -0.52 16.60 2.25 0.04 -0.48 16 16 C -0.11 -0.23 5.30 -104.56 -0.55 -0.79 16 17 C -0.07 0.01 2.44 36.01 0.09 0.10 16 18 O -0.54 -0.21 12.86 -35.23 -0.45 -0.66 16 19 Si 0.70 -1.58 30.19 -169.99 -5.13 -6.72 16 20 C -0.07 -0.06 8.66 -39.57 -0.34 -0.41 16 21 C -0.15 -0.11 10.02 -39.53 -0.40 -0.50 16 22 C 0.12 0.32 7.31 -39.31 -0.29 0.03 16 23 F -0.12 -0.41 17.11 2.25 0.04 -0.37 16 24 C -0.13 -0.02 7.48 -25.92 -0.19 -0.22 16 25 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 26 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 27 H 0.06 -0.03 6.24 -51.93 -0.32 -0.35 16 28 H 0.06 0.04 8.14 -51.93 -0.42 -0.39 16 29 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 30 H 0.06 0.03 8.14 -51.93 -0.42 -0.39 16 31 H 0.06 0.01 7.02 -51.93 -0.36 -0.36 16 32 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 33 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 34 H 0.09 0.19 7.92 -51.93 -0.41 -0.22 16 35 H 0.07 0.09 8.14 -51.92 -0.42 -0.33 16 36 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 37 H 0.06 0.09 7.88 -51.93 -0.41 -0.32 16 38 H 0.08 -0.09 7.91 -51.93 -0.41 -0.50 16 39 H 0.39 -1.87 8.74 45.56 0.40 -1.47 16 40 H -0.25 0.02 7.11 56.52 0.40 0.42 16 41 H -0.25 0.00 6.74 56.52 0.38 0.38 16 42 H 0.14 -0.08 4.89 -52.49 -0.26 -0.34 16 43 H 0.15 -0.27 8.06 -52.49 -0.42 -0.70 16 44 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 45 H 0.09 0.04 8.10 -51.93 -0.42 -0.38 16 LS Contribution 373.34 15.07 5.63 5.63 Total: 0.00 -6.27 373.34 -8.96 -15.22 By element: Atomic # 1 Polarization: -1.88 SS G_CDS: -6.78 Total: -8.66 kcal Atomic # 6 Polarization: 0.51 SS G_CDS: -1.75 Total: -1.24 kcal Atomic # 8 Polarization: -2.39 SS G_CDS: -1.00 Total: -3.39 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 0.08 Total: -0.85 kcal Atomic # 14 Polarization: -1.58 SS G_CDS: -5.13 Total: -6.72 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -6.27 -8.96 -15.22 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_14032924_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -135.490 kcal (2) G-P(sol) polarization free energy of solvation -6.266 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -141.756 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -150.714 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds