Wall clock time and date at job start Mon Mar 8 2021 08:26:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34752 * 117.00115 * 2 1 4 4 O 1.21513 * 119.99723 * 359.97438 * 3 2 1 5 5 C 1.47394 * 120.00285 * 179.97438 * 3 2 1 6 6 C 1.40196 * 120.19848 * 179.71895 * 5 3 2 7 7 O 1.35639 * 120.15558 * 0.02562 * 6 5 3 8 8 C 1.42893 * 117.00191 * 179.97438 * 7 6 5 9 9 C 1.53005 * 109.47198 * 180.02562 * 8 7 6 10 10 H 1.08992 * 112.84982 * 45.33026 * 9 8 7 11 11 C 1.53781 * 113.61246 * 176.52869 * 9 8 7 12 12 C 1.53781 * 87.08205 * 89.11499 * 11 9 8 13 13 O 1.42896 * 113.61683 * 270.79712 * 12 11 9 14 14 C 1.42900 * 113.99778 * 294.79253 * 13 12 11 15 15 C 1.53005 * 113.61527 * 139.97446 * 12 11 9 16 16 F 1.39902 * 109.46729 * 54.71788 * 15 12 11 17 17 F 1.39898 * 109.47078 * 174.71079 * 15 12 11 18 18 F 1.39901 * 109.47390 * 294.71401 * 15 12 11 19 19 C 1.53780 * 113.61125 * 274.13381 * 9 8 7 20 20 C 1.38711 * 119.69255 * 179.79382 * 6 5 3 21 21 C 1.38059 * 120.08731 * 0.46868 * 20 6 5 22 22 C 1.50697 * 119.79700 * 179.76614 * 21 20 6 23 23 O 1.42900 * 109.47250 * 300.01719 * 22 21 20 24 24 Si 1.86305 * 109.47022 * 180.02562 * 22 21 20 25 25 C 1.38569 * 120.40315 * 359.78332 * 21 20 6 26 26 C 1.37763 * 120.30675 * 359.97438 * 25 21 20 27 27 H 1.08995 * 109.46877 * 60.00275 * 1 2 3 28 28 H 1.08999 * 109.47308 * 300.00462 * 1 2 3 29 29 H 1.09000 * 109.46973 * 180.02562 * 1 2 3 30 30 H 1.08997 * 109.47270 * 299.99675 * 8 7 6 31 31 H 1.09003 * 109.47584 * 60.00059 * 8 7 6 32 32 H 1.09000 * 113.61097 * 203.65981 * 11 9 8 33 33 H 1.08997 * 113.62078 * 334.48172 * 11 9 8 34 34 H 1.09000 * 109.46970 * 302.48244 * 14 13 12 35 35 H 1.08995 * 109.47481 * 62.48857 * 14 13 12 36 36 H 1.09006 * 109.46692 * 182.49217 * 14 13 12 37 37 H 1.09004 * 113.61714 * 25.43852 * 19 9 8 38 38 H 1.09004 * 113.61229 * 156.33443 * 19 9 8 39 39 H 1.07998 * 119.95587 * 180.22762 * 20 6 5 40 40 H 1.09004 * 109.47461 * 60.01843 * 22 21 20 41 41 H 0.96698 * 114.00571 * 179.97438 * 23 22 21 42 42 H 1.48498 * 109.99859 * 59.99594 * 24 22 21 43 43 H 1.48496 * 109.99886 * 181.31911 * 24 22 21 44 44 H 1.07996 * 119.84634 * 179.97438 * 25 21 20 45 45 H 1.07992 * 120.04876 * 179.97438 * 26 25 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0638 1.2006 0.0000 4 8 1.4019 2.2197 -0.0005 5 6 3.5357 1.2778 0.0006 6 6 4.1764 2.5248 -0.0054 7 8 3.4447 3.6668 -0.0112 8 6 4.1667 4.8999 -0.0164 9 6 3.1796 6.0689 -0.0219 10 1 2.3669 5.9399 0.6928 11 6 3.8568 7.4473 0.0575 12 6 3.9150 7.4199 -1.4789 13 8 5.1014 6.8140 -1.9961 14 6 6.2995 7.5320 -1.6946 15 6 3.6060 8.7704 -2.1283 16 9 4.4584 9.7468 -1.6017 17 9 3.8001 8.6785 -3.5107 18 9 2.2772 9.1208 -1.8662 19 6 2.7050 6.4678 -1.4292 20 6 5.5622 2.5852 -0.0004 21 6 6.3057 1.4219 0.0005 22 6 7.8109 1.4952 0.0005 23 8 8.2540 2.1906 -1.1665 24 14 8.5166 -0.2290 0.0011 25 6 5.6764 0.1874 0.0011 26 6 4.3010 0.1082 0.0012 27 1 -0.3633 0.5138 -0.8900 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 -1.0277 0.0005 30 1 4.7931 4.9580 0.8737 31 1 4.7943 4.9498 -0.9063 32 1 3.2102 8.2291 0.4560 33 1 4.8372 7.4255 0.5334 34 1 6.2210 8.5483 -2.0806 35 1 6.4422 7.5635 -0.6145 36 1 7.1494 7.0317 -2.1590 37 1 2.7566 5.6553 -2.1540 38 1 1.7440 6.9823 -1.4363 39 1 6.0602 3.5435 -0.0013 40 1 8.1489 2.0265 0.8903 41 1 9.2150 2.2760 -1.2325 42 1 8.0632 -0.9638 -1.2071 43 1 10.0000 -0.1707 0.0333 44 1 6.2668 -0.7169 0.0014 45 1 3.8149 -0.8561 0.0012 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_16464166_17321602.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:26:37 Heat of formation + Delta-G solvation = -274.680316 kcal Electronic energy + Delta-G solvation = -36478.353119 eV Core-core repulsion = 31015.267064 eV Total energy + Delta-G solvation = -5463.086055 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 377.126 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -51.15153 -48.69889 -48.58114 -41.98513 -41.37951 -40.47001 -39.05888 -37.65234 -37.15361 -37.01009 -33.23822 -31.55554 -30.36358 -28.94564 -28.32458 -27.64010 -26.95196 -26.85840 -23.94578 -23.56330 -23.00043 -21.84812 -20.57526 -19.80653 -19.45350 -19.24073 -19.17252 -18.67082 -18.37321 -17.90828 -17.39250 -17.21325 -16.96279 -16.73536 -16.53977 -16.21890 -16.01829 -15.77236 -15.61039 -15.51646 -15.48883 -15.15578 -15.03076 -14.78656 -14.74333 -14.55599 -14.43831 -14.19104 -14.06467 -13.99283 -13.79227 -13.65562 -13.34609 -13.19390 -12.97051 -12.81127 -12.71213 -12.45357 -12.40536 -12.03546 -11.89200 -11.79916 -11.68037 -11.60831 -11.22281 -10.86242 -10.69821 -10.07699 -9.36630 -5.04587 -0.39284 0.29082 1.14074 1.51596 1.57217 1.61309 1.80781 1.87120 1.91378 2.01449 2.55474 2.60184 2.64388 2.87666 3.11951 3.27340 3.36298 3.45282 3.50326 3.64402 3.72594 3.84135 4.01583 4.06199 4.08399 4.13207 4.17507 4.21348 4.26348 4.28224 4.33433 4.36284 4.36825 4.45051 4.51164 4.58786 4.64867 4.68183 4.71703 4.78311 4.93464 4.98292 5.06376 5.27352 5.51304 5.53347 5.62374 6.26013 6.28568 6.95504 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.359 6.359 3 C 0.507 3.493 4 O -0.485 6.485 5 C -0.162 4.162 6 C 0.198 3.802 7 O -0.278 6.278 8 C 0.062 3.938 9 C -0.096 4.096 10 H 0.108 0.892 11 C -0.142 4.142 12 C 0.038 3.962 13 O -0.332 6.332 14 C 0.009 3.991 15 C 0.437 3.563 16 F -0.182 7.182 17 F -0.174 7.174 18 F -0.174 7.174 19 C -0.110 4.110 20 C -0.195 4.195 21 C 0.004 3.996 22 C -0.085 4.085 23 O -0.533 6.533 24 Si 0.687 3.313 25 C -0.169 4.169 26 C -0.016 4.016 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.103 0.897 30 H 0.069 0.931 31 H 0.087 0.913 32 H 0.113 0.887 33 H 0.094 0.906 34 H 0.054 0.946 35 H 0.054 0.946 36 H 0.102 0.898 37 H 0.099 0.901 38 H 0.117 0.883 39 H 0.140 0.860 40 H 0.082 0.918 41 H 0.382 0.618 42 H -0.251 1.251 43 H -0.260 1.260 44 H 0.138 0.862 45 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.207 -2.913 4.655 6.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 O -0.276 6.276 3 C 0.351 3.649 4 O -0.373 6.373 5 C -0.163 4.163 6 C 0.150 3.850 7 O -0.189 6.189 8 C -0.012 4.012 9 C -0.114 4.114 10 H 0.126 0.874 11 C -0.179 4.179 12 C -0.005 4.005 13 O -0.249 6.249 14 C -0.086 4.086 15 C 0.383 3.617 16 F -0.163 7.163 17 F -0.155 7.155 18 F -0.156 7.156 19 C -0.147 4.147 20 C -0.214 4.214 21 C 0.004 3.996 22 C -0.194 4.194 23 O -0.341 6.341 24 Si 0.587 3.413 25 C -0.187 4.187 26 C -0.034 4.034 27 H 0.082 0.918 28 H 0.082 0.918 29 H 0.121 0.879 30 H 0.087 0.913 31 H 0.105 0.895 32 H 0.131 0.869 33 H 0.112 0.888 34 H 0.073 0.927 35 H 0.073 0.927 36 H 0.120 0.880 37 H 0.117 0.883 38 H 0.135 0.865 39 H 0.158 0.842 40 H 0.100 0.900 41 H 0.231 0.769 42 H -0.176 1.176 43 H -0.185 1.185 44 H 0.155 0.845 45 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 2.610 -3.247 3.994 5.771 hybrid contribution 0.847 1.666 -0.690 1.992 sum 3.457 -1.581 3.303 5.036 Atomic orbital electron populations 1.23278 0.75687 1.03839 1.02717 1.86519 1.23731 1.32645 1.84741 1.20804 0.88607 0.81717 0.73729 1.90899 1.66293 1.35604 1.44487 1.18448 0.89844 0.91805 1.16251 1.18918 0.89648 0.85686 0.90766 1.86273 1.34414 1.11893 1.86281 1.22883 0.94247 0.81159 1.02946 1.22029 0.98963 0.91893 0.98553 0.87366 1.23587 1.03695 0.98250 0.92401 1.24134 0.91492 0.89666 0.95171 1.88098 1.12915 1.47559 1.76357 1.23151 0.86506 0.97757 1.01221 1.21178 0.74656 0.88298 0.77608 1.93183 1.70502 1.66327 1.86333 1.93221 1.94713 1.96376 1.31211 1.93183 1.35528 1.93103 1.93747 1.23294 0.94774 0.98376 0.98228 1.21024 0.91471 0.99972 1.08912 1.19307 0.93526 0.92927 0.93851 1.24926 0.94643 1.09129 0.90698 1.86591 1.27536 1.77154 1.42793 0.94916 0.79972 0.77227 0.89177 1.20819 0.94642 0.96775 1.06424 1.21260 0.92996 0.97545 0.91590 0.91794 0.91772 0.87885 0.91306 0.89485 0.86879 0.88757 0.92687 0.92729 0.88004 0.88268 0.86489 0.84189 0.89989 0.76944 1.17561 1.18471 0.84491 0.83132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.00 10.57 101.05 1.07 1.07 16 2 O -0.36 -0.84 9.82 -40.63 -0.40 -1.24 16 3 C 0.51 2.10 7.89 34.46 0.27 2.38 16 4 O -0.49 -3.22 14.95 -26.60 -0.40 -3.62 16 5 C -0.16 -0.45 5.89 -104.86 -0.62 -1.06 16 6 C 0.20 0.55 6.70 -38.67 -0.26 0.29 16 7 O -0.28 -0.90 8.21 -40.50 -0.33 -1.23 16 8 C 0.06 0.01 4.33 37.16 0.16 0.18 16 9 C -0.10 0.06 4.19 -89.81 -0.38 -0.32 16 10 H 0.11 -0.06 8.14 -51.93 -0.42 -0.48 16 11 C -0.14 0.25 6.52 -25.92 -0.17 0.08 16 12 C 0.04 0.01 0.85 -89.66 -0.08 -0.07 16 13 O -0.33 -0.28 8.34 -35.23 -0.29 -0.58 16 14 C 0.01 -0.01 10.43 101.05 1.05 1.04 16 15 C 0.44 0.74 2.51 37.16 0.09 0.83 16 16 F -0.18 -0.31 15.24 2.25 0.03 -0.28 16 17 F -0.17 -0.61 17.09 2.25 0.04 -0.57 16 18 F -0.17 -0.32 15.82 2.25 0.04 -0.29 16 19 C -0.11 -0.02 6.92 -25.78 -0.18 -0.20 16 20 C -0.20 -0.23 8.58 -39.47 -0.34 -0.57 16 21 C 0.00 0.00 5.43 -104.57 -0.57 -0.57 16 22 C -0.08 0.11 2.80 36.00 0.10 0.21 16 23 O -0.53 0.06 12.74 -35.23 -0.45 -0.39 16 24 Si 0.69 -1.40 29.77 -169.99 -5.06 -6.46 16 25 C -0.17 0.06 8.64 -39.63 -0.34 -0.28 16 26 C -0.02 -0.01 9.61 -39.18 -0.38 -0.38 16 27 H 0.06 0.02 8.14 -51.93 -0.42 -0.41 16 28 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 29 H 0.10 -0.27 8.14 -51.93 -0.42 -0.70 16 30 H 0.07 -0.10 7.65 -51.93 -0.40 -0.49 16 31 H 0.09 0.05 5.62 -51.93 -0.29 -0.24 16 32 H 0.11 -0.29 8.06 -51.93 -0.42 -0.71 16 33 H 0.09 -0.28 6.70 -51.93 -0.35 -0.63 16 34 H 0.05 -0.03 6.25 -51.93 -0.32 -0.36 16 35 H 0.05 -0.15 6.76 -51.93 -0.35 -0.50 16 36 H 0.10 -0.23 8.14 -51.93 -0.42 -0.66 16 37 H 0.10 0.13 8.10 -51.93 -0.42 -0.29 16 38 H 0.12 -0.08 7.01 -51.93 -0.36 -0.44 16 39 H 0.14 0.00 6.30 -52.49 -0.33 -0.33 16 40 H 0.08 -0.27 7.96 -51.93 -0.41 -0.68 16 41 H 0.38 -1.55 8.74 45.56 0.40 -1.15 16 42 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 43 H -0.26 0.00 7.11 56.52 0.40 0.40 16 44 H 0.14 -0.35 4.85 -52.49 -0.25 -0.61 16 45 H 0.15 -0.26 7.61 -52.49 -0.40 -0.66 16 LS Contribution 380.38 15.07 5.73 5.73 Total: 0.00 -8.65 380.38 -6.87 -15.52 By element: Atomic # 1 Polarization: -4.00 SS G_CDS: -5.23 Total: -9.23 kcal Atomic # 6 Polarization: 3.18 SS G_CDS: -0.55 Total: 2.63 kcal Atomic # 8 Polarization: -5.19 SS G_CDS: -1.87 Total: -7.06 kcal Atomic # 9 Polarization: -1.24 SS G_CDS: 0.11 Total: -1.14 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: -5.06 Total: -6.46 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -8.65 -6.87 -15.52 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_16464166_17321602.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -259.164 kcal (2) G-P(sol) polarization free energy of solvation -8.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -267.810 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.870 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.516 kcal (6) G-S(sol) free energy of system = (1) + (5) -274.680 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds