Wall clock time and date at job start Mon Mar 8 2021 12:12:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52998 * 1 3 3 C 1.52998 * 109.47248 * 2 1 4 4 C 1.52999 * 109.47385 * 239.99887 * 2 1 3 5 5 C 1.50703 * 109.47099 * 119.99685 * 2 1 3 6 6 C 1.38120 * 119.97025 * 60.00386 * 5 2 1 7 7 C 1.38751 * 119.94437 * 180.02562 * 6 5 2 8 8 O 1.35903 * 120.05355 * 180.02562 * 7 6 5 9 9 C 1.42897 * 117.00184 * 359.97438 * 8 7 6 10 10 C 1.53006 * 109.46881 * 180.02562 * 9 8 7 11 11 H 1.08993 * 109.46955 * 305.00145 * 10 9 8 12 12 C 1.52997 * 109.47127 * 65.00134 * 10 9 8 13 13 C 1.52996 * 109.47131 * 180.02562 * 12 10 9 14 14 C 1.53002 * 109.46972 * 299.99541 * 13 12 10 15 15 H 1.08996 * 109.47407 * 300.00487 * 14 13 12 16 16 O 1.42905 * 109.47086 * 179.97438 * 14 13 12 17 17 C 1.53002 * 109.47128 * 60.00146 * 14 13 12 18 18 C 1.52999 * 109.46626 * 184.99673 * 10 9 8 19 19 C 1.38707 * 119.89088 * 0.26755 * 7 6 5 20 20 C 1.50694 * 120.03170 * 179.73047 * 19 7 6 21 21 O 1.42899 * 109.47343 * 75.00075 * 20 19 7 22 22 Si 1.86308 * 109.47257 * 194.99886 * 20 19 7 23 23 C 1.38172 * 119.94194 * 359.49792 * 19 7 6 24 24 C 1.38245 * 120.05332 * 0.48636 * 23 19 7 25 25 H 1.09004 * 109.46970 * 300.00074 * 1 2 3 26 26 H 1.09003 * 109.47284 * 59.99877 * 1 2 3 27 27 H 1.08996 * 109.47146 * 179.97438 * 1 2 3 28 28 H 1.08995 * 109.47343 * 179.97438 * 3 2 1 29 29 H 1.09003 * 109.47078 * 300.00249 * 3 2 1 30 30 H 1.09004 * 109.47196 * 60.00064 * 3 2 1 31 31 H 1.08996 * 109.47194 * 300.00235 * 4 2 1 32 32 H 1.09003 * 109.46717 * 59.99888 * 4 2 1 33 33 H 1.08995 * 109.47254 * 179.97438 * 4 2 1 34 34 H 1.08007 * 120.02789 * 0.02562 * 6 5 2 35 35 H 1.08992 * 109.47198 * 60.00388 * 9 8 7 36 36 H 1.08997 * 109.46749 * 300.00150 * 9 8 7 37 37 H 1.09001 * 109.47289 * 299.99953 * 12 10 9 38 38 H 1.09004 * 109.47261 * 59.99697 * 12 10 9 39 39 H 1.08996 * 109.47134 * 180.02562 * 13 12 10 40 40 H 1.08992 * 109.47534 * 59.99520 * 13 12 10 41 41 H 0.96699 * 113.99523 * 60.00960 * 16 14 13 42 42 H 1.09001 * 109.47600 * 179.97438 * 17 14 13 43 43 H 1.09004 * 109.47006 * 59.99907 * 17 14 13 44 44 H 1.08993 * 109.47839 * 299.99931 * 18 10 9 45 45 H 1.09000 * 109.47160 * 60.00369 * 18 10 9 46 46 H 1.09001 * 109.47090 * 315.00190 * 20 19 7 47 47 H 0.96700 * 114.00235 * 59.99706 * 21 20 19 48 48 H 1.48502 * 109.99804 * 179.97438 * 22 20 19 49 49 H 1.48493 * 110.00020 * 301.32221 * 22 20 19 50 50 H 1.07999 * 119.97561 * 180.22981 * 23 19 7 51 51 H 1.07996 * 119.94727 * 179.74743 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0400 1.4425 0.0000 4 6 2.0400 -0.7213 -1.2492 5 6 2.0323 -0.7104 1.2305 6 6 1.6983 -2.0327 1.4485 7 6 2.1607 -2.6861 2.5819 8 8 1.8339 -3.9873 2.7983 9 6 1.0100 -4.6211 1.8177 10 6 0.7499 -6.0713 2.2304 11 1 1.7007 -6.5788 2.3931 12 6 -0.0684 -6.0948 3.5229 13 6 -0.3280 -7.5449 3.9359 14 6 -1.1041 -8.2596 2.8278 15 1 -2.0551 -7.7524 2.6650 16 8 -1.3461 -9.6143 3.2133 17 6 -0.2858 -8.2361 1.5352 18 6 -0.0265 -6.7854 1.1222 19 6 2.9529 -2.0074 3.4962 20 6 3.4517 -2.7122 4.7312 21 8 4.5122 -3.6018 4.3765 22 14 4.0795 -1.4539 5.9534 23 6 3.2882 -0.6861 3.2711 24 6 2.8265 -0.0375 2.1409 25 1 -0.3633 0.5139 0.8900 26 1 -0.3634 0.5139 -0.8900 27 1 -0.3633 -1.0276 -0.0005 28 1 3.1300 1.4425 0.0005 29 1 1.6766 1.9563 -0.8900 30 1 1.6767 1.9563 0.8900 31 1 1.6767 -1.7489 -1.2492 32 1 1.6767 -0.2074 -2.1392 33 1 3.1300 -0.7208 -1.2494 34 1 1.0778 -2.5578 0.7373 35 1 1.5152 -4.6028 0.8521 36 1 0.0615 -4.0896 1.7417 37 1 0.4846 -5.5860 4.3124 38 1 -1.0193 -5.5872 3.3602 39 1 -0.9114 -7.5617 4.8564 40 1 0.6229 -8.0522 4.0986 41 1 -1.8609 -9.7057 4.0267 42 1 -0.8385 -8.7457 0.7459 43 1 0.6652 -8.7434 1.6980 44 1 -0.9772 -6.2778 0.9595 45 1 0.5565 -6.7686 0.2013 46 1 2.6364 -3.2795 5.1802 47 1 5.2732 -3.1647 3.9704 48 1 4.5738 -2.1363 7.1763 49 1 5.1700 -0.6524 5.3424 50 1 3.9080 -0.1582 3.9807 51 1 3.0863 0.9966 1.9688 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_16982350_16737256.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 12:12:59 Heat of formation + Delta-G solvation = -122.055846 kcal Electronic energy + Delta-G solvation = -28556.220765 eV Core-core repulsion = 24807.092599 eV Total energy + Delta-G solvation = -3749.128167 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 321.202 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -41.64141 -40.28085 -39.17140 -38.21190 -36.81966 -36.31320 -32.18298 -31.91978 -31.81662 -30.82952 -28.28755 -28.24147 -26.72500 -26.50321 -23.85665 -23.40954 -22.94334 -21.93685 -20.98074 -20.42872 -18.75604 -18.21029 -17.86313 -17.10976 -17.05636 -16.77129 -16.35740 -15.91722 -15.76002 -15.50358 -15.24352 -15.22046 -15.05951 -14.76088 -14.64468 -14.55731 -14.07329 -13.67659 -13.57931 -13.42320 -13.25785 -13.14363 -13.07791 -12.99193 -12.74600 -12.68516 -12.52865 -12.24328 -12.17731 -12.04000 -11.81457 -11.77559 -11.72285 -11.56908 -11.44748 -11.43602 -11.13604 -10.72653 -10.41487 -9.77664 -9.07460 -4.91659 0.25335 0.49955 1.35699 1.61430 2.00213 2.18514 2.69015 3.15170 3.43947 3.56071 3.58714 3.66315 3.68158 3.74831 3.88431 3.98504 3.99095 4.02772 4.10073 4.16163 4.23274 4.28134 4.30409 4.34223 4.37444 4.41378 4.45393 4.50731 4.59820 4.63169 4.64886 4.72232 4.75008 4.76794 4.88412 4.89535 4.92156 4.95066 5.00844 5.03419 5.06692 5.11890 5.12352 5.12696 5.21440 5.28786 5.29679 5.36143 5.40027 5.44168 5.66093 5.80919 6.47513 6.54738 6.70385 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.139 4.139 2 C -0.033 4.033 3 C -0.146 4.146 4 C -0.139 4.139 5 C -0.022 4.022 6 C -0.206 4.206 7 C 0.160 3.840 8 O -0.300 6.300 9 C 0.063 3.937 10 C -0.087 4.087 11 H 0.085 0.915 12 C -0.110 4.110 13 C -0.152 4.152 14 C 0.103 3.897 15 H 0.055 0.945 16 O -0.569 6.569 17 C -0.111 4.111 18 C -0.109 4.109 19 C -0.157 4.157 20 C -0.060 4.060 21 O -0.524 6.524 22 Si 0.685 3.315 23 C -0.082 4.082 24 C -0.156 4.156 25 H 0.059 0.941 26 H 0.061 0.939 27 H 0.055 0.945 28 H 0.060 0.940 29 H 0.060 0.940 30 H 0.061 0.939 31 H 0.055 0.945 32 H 0.061 0.939 33 H 0.057 0.943 34 H 0.128 0.872 35 H 0.062 0.938 36 H 0.062 0.938 37 H 0.075 0.925 38 H 0.063 0.937 39 H 0.066 0.934 40 H 0.072 0.928 41 H 0.379 0.621 42 H 0.073 0.927 43 H 0.072 0.928 44 H 0.068 0.932 45 H 0.073 0.927 46 H 0.115 0.885 47 H 0.371 0.629 48 H -0.258 1.258 49 H -0.260 1.260 50 H 0.132 0.868 51 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.893 3.639 -1.206 4.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.196 4.196 2 C -0.033 4.033 3 C -0.203 4.203 4 C -0.196 4.196 5 C -0.023 4.023 6 C -0.224 4.224 7 C 0.114 3.886 8 O -0.213 6.213 9 C -0.012 4.012 10 C -0.105 4.105 11 H 0.103 0.897 12 C -0.147 4.147 13 C -0.190 4.190 14 C 0.044 3.956 15 H 0.073 0.927 16 O -0.375 6.375 17 C -0.149 4.149 18 C -0.147 4.147 19 C -0.158 4.158 20 C -0.170 4.170 21 O -0.330 6.330 22 Si 0.587 3.413 23 C -0.100 4.100 24 C -0.174 4.174 25 H 0.078 0.922 26 H 0.080 0.920 27 H 0.074 0.926 28 H 0.079 0.921 29 H 0.079 0.921 30 H 0.080 0.920 31 H 0.074 0.926 32 H 0.080 0.920 33 H 0.076 0.924 34 H 0.146 0.854 35 H 0.080 0.920 36 H 0.080 0.920 37 H 0.093 0.907 38 H 0.082 0.918 39 H 0.085 0.915 40 H 0.091 0.909 41 H 0.226 0.774 42 H 0.091 0.909 43 H 0.091 0.909 44 H 0.087 0.913 45 H 0.091 0.909 46 H 0.132 0.868 47 H 0.218 0.782 48 H -0.183 1.183 49 H -0.185 1.185 50 H 0.150 0.850 51 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -2.231 3.229 -0.882 4.022 hybrid contribution 0.391 -0.218 -0.515 0.683 sum -1.839 3.010 -1.398 3.794 Atomic orbital electron populations 1.21892 0.93347 1.02067 1.02285 1.19567 0.95947 0.95280 0.92474 1.21980 1.01314 0.94653 1.02318 1.21896 1.01373 1.00115 0.96260 1.19669 0.94775 0.92836 0.94988 1.21079 1.06403 0.96112 0.98849 1.18694 0.93479 0.83420 0.93032 1.86136 1.65865 1.21688 1.47583 1.22890 0.93802 0.93406 0.91133 1.21213 1.00367 0.92969 0.95994 0.89653 1.21497 0.99936 0.96108 0.97192 1.22276 1.01764 0.96382 0.98564 1.21846 0.97173 0.82271 0.94283 0.92749 1.86520 1.77407 1.26346 1.47232 1.21449 1.00828 0.96324 0.96281 1.21481 1.00500 0.94996 0.97733 1.19563 1.03271 0.94481 0.98473 1.24811 0.93116 1.00176 0.98867 1.86645 1.28732 1.35550 1.82076 0.95083 0.86962 0.80540 0.78749 1.20990 0.98478 0.93031 0.97461 1.21046 1.00680 1.00792 0.94860 0.92227 0.92028 0.92575 0.92126 0.92108 0.91983 0.92569 0.91998 0.92368 0.85442 0.91986 0.91954 0.90671 0.91831 0.91528 0.90930 0.77397 0.90860 0.90941 0.91315 0.90851 0.86753 0.78201 1.18296 1.18549 0.85039 0.85104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.16 8.29 37.16 0.31 0.47 16 2 C -0.03 0.03 0.85 -155.66 -0.13 -0.11 16 3 C -0.15 0.21 7.13 37.16 0.27 0.47 16 4 C -0.14 0.13 8.29 37.16 0.31 0.43 16 5 C -0.02 -0.01 4.76 -104.65 -0.50 -0.51 16 6 C -0.21 -0.19 7.70 -39.43 -0.30 -0.49 16 7 C 0.16 0.33 6.66 -39.22 -0.26 0.07 16 8 O -0.30 -0.66 9.00 -19.44 -0.18 -0.83 16 9 C 0.06 -0.02 4.12 37.16 0.15 0.14 16 10 C -0.09 0.04 2.43 -90.62 -0.22 -0.18 16 11 H 0.09 0.07 8.14 -51.93 -0.42 -0.36 16 12 C -0.11 0.05 5.10 -26.73 -0.14 -0.09 16 13 C -0.15 0.05 5.55 -26.73 -0.15 -0.10 16 14 C 0.10 0.01 3.47 -26.73 -0.09 -0.08 16 15 H 0.05 -0.03 8.14 -51.93 -0.42 -0.45 16 16 O -0.57 -0.79 13.32 -35.23 -0.47 -1.26 16 17 C -0.11 0.00 5.57 -26.70 -0.15 -0.15 16 18 C -0.11 0.15 5.21 -26.70 -0.14 0.01 16 19 C -0.16 -0.24 5.27 -104.48 -0.55 -0.79 16 20 C -0.06 -0.08 2.38 36.00 0.09 0.00 16 21 O -0.52 -1.54 12.88 -35.23 -0.45 -1.99 16 22 Si 0.68 -0.03 30.26 -169.99 -5.14 -5.17 16 23 C -0.08 -0.04 8.66 -39.60 -0.34 -0.38 16 24 C -0.16 -0.05 8.97 -39.56 -0.36 -0.41 16 25 H 0.06 -0.05 8.14 -51.93 -0.42 -0.47 16 26 H 0.06 -0.10 8.14 -51.93 -0.42 -0.52 16 27 H 0.06 -0.07 7.39 -51.93 -0.38 -0.45 16 28 H 0.06 -0.08 7.51 -51.93 -0.39 -0.47 16 29 H 0.06 -0.10 8.14 -51.93 -0.42 -0.53 16 30 H 0.06 -0.10 7.51 -51.93 -0.39 -0.49 16 31 H 0.06 -0.05 7.39 -51.93 -0.38 -0.44 16 32 H 0.06 -0.09 8.14 -51.93 -0.42 -0.51 16 33 H 0.06 -0.02 8.14 -51.93 -0.42 -0.44 16 34 H 0.13 -0.04 5.34 -52.48 -0.28 -0.32 16 35 H 0.06 -0.05 7.66 -51.93 -0.40 -0.44 16 36 H 0.06 -0.07 7.66 -51.93 -0.40 -0.47 16 37 H 0.07 0.05 7.82 -51.93 -0.41 -0.36 16 38 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 -0.07 8.14 -51.93 -0.42 -0.50 16 40 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 41 H 0.38 -0.93 9.08 45.56 0.41 -0.52 16 42 H 0.07 0.02 8.14 -51.93 -0.42 -0.41 16 43 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 44 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 45 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 46 H 0.11 0.18 7.83 -51.93 -0.41 -0.22 16 47 H 0.37 0.01 8.70 45.56 0.40 0.41 16 48 H -0.26 -0.83 7.11 56.52 0.40 -0.43 16 49 H -0.26 -0.34 6.68 56.52 0.38 0.04 16 50 H 0.13 -0.12 4.87 -52.49 -0.26 -0.37 16 51 H 0.13 -0.15 5.89 -52.49 -0.31 -0.46 16 LS Contribution 388.27 15.07 5.85 5.85 Total: 0.00 -5.66 388.27 -10.93 -16.60 By element: Atomic # 1 Polarization: -3.16 SS G_CDS: -8.33 Total: -11.49 kcal Atomic # 6 Polarization: 0.51 SS G_CDS: -2.21 Total: -1.70 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -1.10 Total: -4.09 kcal Atomic # 14 Polarization: -0.03 SS G_CDS: -5.14 Total: -5.17 kcal Total LS contribution 5.85 Total: 5.85 kcal Total: -5.66 -10.93 -16.60 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_16982350_16737256.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -105.460 kcal (2) G-P(sol) polarization free energy of solvation -5.665 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -111.125 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.930 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -122.056 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds