Wall clock time and date at job start Mon Mar 8 2021 07:48:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53008 * 109.46558 * 2 1 4 4 C 1.52999 * 109.47301 * 240.00695 * 2 1 3 5 5 O 1.42893 * 109.47191 * 119.99920 * 2 1 3 6 6 C 1.42896 * 113.99767 * 60.00538 * 5 2 1 7 7 H 1.09005 * 112.85247 * 341.18965 * 6 5 2 8 8 C 1.53789 * 113.69287 * 112.46450 * 6 5 2 9 9 C 1.53780 * 87.08347 * 139.99133 * 8 6 5 10 10 H 1.08998 * 113.69289 * 89.12478 * 9 8 6 11 11 C 1.52999 * 113.61531 * 220.02256 * 9 8 6 12 12 O 1.42905 * 109.46728 * 272.49719 * 11 9 8 13 13 C 1.35896 * 117.00039 * 179.97438 * 12 11 9 14 14 C 1.38699 * 120.04822 * 359.72154 * 13 12 11 15 15 C 1.38255 * 119.93062 * 179.74789 * 14 13 12 16 16 Br 1.89101 * 119.97964 * 180.27188 * 15 14 13 17 17 C 1.38338 * 120.03616 * 0.53245 * 15 14 13 18 18 C 1.38267 * 120.10118 * 359.74129 * 17 15 14 19 19 C 1.50701 * 119.96493 * 180.02562 * 18 17 15 20 20 O 1.42901 * 109.46981 * 244.97877 * 19 18 17 21 21 Si 1.86302 * 109.47248 * 4.97960 * 19 18 17 22 22 C 1.38124 * 120.06678 * 359.97438 * 18 17 15 23 23 C 1.53786 * 87.08292 * 334.56759 * 9 8 6 24 24 H 1.08995 * 109.47322 * 299.99610 * 1 2 3 25 25 H 1.09001 * 109.47401 * 60.00110 * 1 2 3 26 26 H 1.09001 * 109.46642 * 179.97438 * 1 2 3 27 27 H 1.09005 * 109.46416 * 179.97438 * 3 2 1 28 28 H 1.08992 * 109.47403 * 299.99977 * 3 2 1 29 29 H 1.08999 * 109.46968 * 60.00688 * 3 2 1 30 30 H 1.09008 * 109.46714 * 299.99638 * 4 2 1 31 31 H 1.09001 * 109.47550 * 59.99286 * 4 2 1 32 32 H 1.08996 * 109.47132 * 179.97438 * 4 2 1 33 33 H 1.08991 * 113.61045 * 25.44064 * 8 6 5 34 34 H 1.09000 * 113.61369 * 254.53802 * 8 6 5 35 35 H 1.09000 * 109.47486 * 152.49657 * 11 9 8 36 36 H 1.09001 * 109.47362 * 32.48934 * 11 9 8 37 37 H 1.07995 * 120.03293 * 0.02562 * 14 13 12 38 38 H 1.08003 * 119.94459 * 179.76943 * 17 15 14 39 39 H 1.09002 * 109.46850 * 124.97558 * 19 18 17 40 40 H 0.96698 * 114.00153 * 180.02562 * 20 19 18 41 41 H 1.48496 * 109.99855 * 178.68141 * 21 19 18 42 42 H 1.48500 * 109.99863 * 299.99755 * 21 19 18 43 43 H 1.08005 * 120.02080 * 180.02562 * 22 18 17 44 44 H 1.08996 * 113.61664 * 139.97951 * 23 9 8 45 45 H 1.08996 * 113.61560 * 270.80437 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0401 -0.7211 -1.2493 5 8 2.0064 -0.6736 1.1667 6 6 1.5848 -2.0355 1.2643 7 1 0.7236 -2.2582 0.6343 8 6 2.7321 -3.0494 1.1205 9 6 2.0544 -3.8566 2.2402 10 1 1.3215 -4.5776 1.8783 11 6 3.0398 -4.4625 3.2416 12 8 3.4723 -5.7404 2.7704 13 6 4.3571 -6.4177 3.5483 14 6 4.8041 -5.8614 4.7376 15 6 5.7001 -6.5549 5.5297 16 35 6.3046 -5.8010 7.1552 17 6 6.1590 -7.7976 5.1312 18 6 5.7187 -8.3511 3.9432 19 6 6.2201 -9.7054 3.5123 20 8 6.9866 -9.5704 2.3139 21 14 7.2898 -10.4279 4.8557 22 6 4.8189 -7.6646 3.1514 23 6 1.4333 -2.5312 2.7123 24 1 -0.3634 0.5137 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1300 1.4426 0.0005 28 1 1.6766 1.9564 -0.8899 29 1 1.6766 1.9563 0.8900 30 1 1.6767 -1.7488 -1.2493 31 1 1.6767 -0.2073 -2.1393 32 1 3.1300 -0.7207 -1.2495 33 1 3.7065 -2.6485 1.3996 34 1 2.7439 -3.5619 0.1585 35 1 2.5501 -4.5785 4.2085 36 1 3.9016 -3.8036 3.3474 37 1 4.4490 -4.8894 5.0467 38 1 6.8618 -8.3365 5.7494 39 1 5.3721 -10.3653 3.3289 40 1 7.3415 -10.4047 1.9778 41 1 7.7646 -11.7770 4.4563 42 1 8.4496 -9.5375 5.1153 43 1 4.4752 -8.0978 2.2237 44 1 0.3966 -2.6254 3.0353 45 1 2.0520 -1.9894 3.4276 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_17850308_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:47 Heat of formation + Delta-G solvation = -63.818687 kcal Electronic energy + Delta-G solvation = -25286.561683 eV Core-core repulsion = 21511.216104 eV Total energy + Delta-G solvation = -3775.345579 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.082 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.52713 -40.81025 -39.28791 -38.18577 -37.44482 -33.94437 -33.58069 -31.97986 -30.55975 -29.23979 -28.42124 -28.30175 -26.99371 -26.67950 -23.97435 -23.49523 -22.03925 -20.84044 -20.66832 -18.89914 -18.61435 -17.91764 -17.45963 -17.33549 -17.02831 -16.51974 -16.02466 -15.84251 -15.78963 -15.43679 -14.67353 -14.65809 -14.51619 -14.39338 -14.07753 -13.92479 -13.63011 -13.49907 -13.36036 -13.24904 -13.13069 -12.87024 -12.71687 -12.70703 -12.58816 -12.35565 -12.13808 -11.98628 -11.79057 -11.73884 -11.53328 -11.35759 -11.30785 -11.20681 -10.59132 -10.37265 -9.87450 -9.31854 -5.00870 -0.04469 0.17277 0.55301 1.18611 1.54729 1.89418 2.02513 2.39944 2.70895 3.19826 3.39567 3.50272 3.62086 3.71235 3.74065 3.83255 3.86143 3.91830 3.95158 4.04022 4.04865 4.07568 4.15399 4.21964 4.27173 4.38051 4.47639 4.53613 4.58760 4.61959 4.70881 4.73136 4.74829 4.78859 4.86225 4.89050 4.96539 4.98053 5.06947 5.07666 5.10954 5.24430 5.26536 5.28252 5.33544 5.44964 6.27994 6.36152 6.39070 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C 0.105 3.895 3 C -0.139 4.139 4 C -0.177 4.177 5 O -0.361 6.361 6 C 0.062 3.938 7 H 0.093 0.907 8 C -0.148 4.148 9 C -0.109 4.109 10 H 0.105 0.895 11 C 0.069 3.931 12 O -0.306 6.306 13 C 0.142 3.858 14 C -0.178 4.178 15 C -0.045 4.045 16 Br -0.038 7.038 17 C -0.126 4.126 18 C -0.028 4.028 19 C -0.075 4.075 20 O -0.533 6.533 21 Si 0.681 3.319 22 C -0.110 4.110 23 C -0.127 4.127 24 H 0.065 0.935 25 H 0.068 0.932 26 H 0.059 0.941 27 H 0.063 0.937 28 H 0.071 0.929 29 H 0.063 0.937 30 H 0.058 0.942 31 H 0.066 0.934 32 H 0.064 0.936 33 H 0.091 0.909 34 H 0.072 0.928 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.141 0.859 38 H 0.138 0.862 39 H 0.083 0.917 40 H 0.382 0.618 41 H -0.257 1.257 42 H -0.251 1.251 43 H 0.140 0.860 44 H 0.078 0.922 45 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.385 -1.009 -0.372 3.552 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.236 4.236 2 C 0.066 3.934 3 C -0.196 4.196 4 C -0.234 4.234 5 O -0.281 6.281 6 C 0.004 3.996 7 H 0.110 0.890 8 C -0.186 4.186 9 C -0.128 4.128 10 H 0.123 0.877 11 C -0.006 4.006 12 O -0.219 6.219 13 C 0.095 3.905 14 C -0.199 4.199 15 C -0.125 4.125 16 Br 0.047 6.953 17 C -0.146 4.146 18 C -0.029 4.029 19 C -0.185 4.185 20 O -0.341 6.341 21 Si 0.581 3.419 22 C -0.129 4.129 23 C -0.164 4.164 24 H 0.084 0.916 25 H 0.087 0.913 26 H 0.078 0.922 27 H 0.082 0.918 28 H 0.090 0.910 29 H 0.082 0.918 30 H 0.077 0.923 31 H 0.085 0.915 32 H 0.083 0.917 33 H 0.109 0.891 34 H 0.091 0.909 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.159 0.841 38 H 0.156 0.844 39 H 0.101 0.899 40 H 0.231 0.769 41 H -0.182 1.182 42 H -0.175 1.175 43 H 0.158 0.842 44 H 0.097 0.903 45 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -2.495 -0.339 0.492 2.565 hybrid contribution 0.048 -0.465 -1.539 1.609 sum -2.447 -0.804 -1.048 2.781 Atomic orbital electron populations 1.22472 0.95633 1.02449 1.03093 1.21542 0.93107 0.93259 0.85518 1.21772 1.02039 0.93205 1.02615 1.22472 1.02338 1.00769 0.97818 1.88034 1.73767 1.23351 1.42899 1.23567 0.97037 0.81873 0.97104 0.88975 1.23625 0.99459 0.96462 0.99044 1.22317 0.97965 0.95863 0.96631 0.87671 1.22907 0.97600 0.82244 0.97859 1.86111 1.57248 1.32075 1.46485 1.18845 0.90188 0.91902 0.89580 1.21225 1.01347 1.01881 0.95450 1.21410 1.00375 0.96364 0.94346 1.96801 1.88340 1.83483 1.26628 1.20838 1.01702 0.94668 0.97393 1.18951 0.95531 0.94887 0.93526 1.24776 1.00605 0.97487 0.95608 1.86594 1.71128 1.36241 1.40134 0.94960 0.82888 0.78955 0.85051 1.20379 0.98689 0.92735 1.01059 1.23233 1.01876 0.94161 0.97150 0.91586 0.91344 0.92229 0.91757 0.91049 0.91753 0.92279 0.91523 0.91663 0.89066 0.90887 0.91367 0.91391 0.84148 0.84422 0.89941 0.76933 1.18173 1.17541 0.84232 0.90324 0.88748 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.13 8.38 37.16 0.31 0.44 16 2 C 0.10 0.02 1.11 -90.61 -0.10 -0.08 16 3 C -0.14 0.03 8.84 37.16 0.33 0.36 16 4 C -0.18 0.07 8.38 37.16 0.31 0.38 16 5 O -0.36 -0.60 10.00 -35.23 -0.35 -0.95 16 6 C 0.06 -0.01 2.82 -25.91 -0.07 -0.09 16 7 H 0.09 -0.09 5.54 -51.93 -0.29 -0.38 16 8 C -0.15 0.03 7.47 -25.91 -0.19 -0.17 16 9 C -0.11 0.10 4.01 -89.81 -0.36 -0.26 16 10 H 0.11 -0.12 8.14 -51.93 -0.42 -0.54 16 11 C 0.07 -0.03 4.58 37.16 0.17 0.14 16 12 O -0.31 -0.56 10.14 -19.41 -0.20 -0.76 16 13 C 0.14 0.29 6.69 -39.22 -0.26 0.03 16 14 C -0.18 -0.27 8.78 -39.40 -0.35 -0.61 16 15 C -0.05 -0.08 6.22 -39.54 -0.25 -0.33 16 16 Br -0.04 -0.05 33.70 -68.01 -2.29 -2.35 16 17 C -0.13 -0.19 8.41 -39.53 -0.33 -0.52 16 18 C -0.03 -0.04 5.38 -104.65 -0.56 -0.60 16 19 C -0.08 0.01 2.79 36.01 0.10 0.12 16 20 O -0.53 -0.53 12.81 -35.23 -0.45 -0.98 16 21 Si 0.68 -0.56 29.85 -169.99 -5.07 -5.63 16 22 C -0.11 -0.22 9.62 -39.43 -0.38 -0.60 16 23 C -0.13 0.14 7.47 -25.91 -0.19 -0.05 16 24 H 0.07 -0.02 8.14 -51.93 -0.42 -0.44 16 25 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 26 H 0.06 -0.07 6.24 -51.93 -0.32 -0.39 16 27 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 28 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 29 H 0.06 0.00 8.14 -51.93 -0.42 -0.42 16 30 H 0.06 -0.03 7.02 -51.92 -0.36 -0.40 16 31 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 32 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 33 H 0.09 0.06 7.90 -51.93 -0.41 -0.35 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 -0.10 7.67 -51.93 -0.40 -0.49 16 36 H 0.07 -0.04 7.35 -51.93 -0.38 -0.42 16 37 H 0.14 0.01 6.30 -52.49 -0.33 -0.32 16 38 H 0.14 0.04 4.86 -52.48 -0.26 -0.22 16 39 H 0.08 -0.18 7.96 -51.93 -0.41 -0.59 16 40 H 0.38 -1.19 8.74 45.56 0.40 -0.79 16 41 H -0.26 -0.23 7.11 56.52 0.40 0.18 16 42 H -0.25 -0.59 7.05 56.52 0.40 -0.19 16 43 H 0.14 0.19 8.06 -52.48 -0.42 -0.23 16 44 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 45 H 0.09 -0.07 8.10 -51.93 -0.42 -0.49 16 LS Contribution 378.77 15.07 5.71 5.71 Total: 0.00 -5.15 378.77 -11.53 -16.67 By element: Atomic # 1 Polarization: -2.83 SS G_CDS: -7.04 Total: -9.87 kcal Atomic # 6 Polarization: -0.01 SS G_CDS: -1.83 Total: -1.84 kcal Atomic # 8 Polarization: -1.69 SS G_CDS: -1.00 Total: -2.69 kcal Atomic # 14 Polarization: -0.56 SS G_CDS: -5.07 Total: -5.63 kcal Atomic # 35 Polarization: -0.05 SS G_CDS: -2.29 Total: -2.35 kcal Total LS contribution 5.71 Total: 5.71 kcal Total: -5.15 -11.53 -16.67 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_17850308_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -47.144 kcal (2) G-P(sol) polarization free energy of solvation -5.149 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -52.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.526 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.674 kcal (6) G-S(sol) free energy of system = (1) + (5) -63.819 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds