Wall clock time and date at job start Mon Mar 8 2021 07:48:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53003 * 1 3 3 C 1.53008 * 109.46558 * 2 1 4 4 C 1.52999 * 109.47301 * 240.00695 * 2 1 3 5 5 O 1.42893 * 109.47191 * 119.99920 * 2 1 3 6 6 C 1.42896 * 113.99767 * 60.00538 * 5 2 1 7 7 H 1.09005 * 112.85247 * 341.18965 * 6 5 2 8 8 C 1.53789 * 113.69287 * 112.46450 * 6 5 2 9 9 C 1.53780 * 87.08347 * 139.99133 * 8 6 5 10 10 H 1.08998 * 113.69289 * 89.12478 * 9 8 6 11 11 C 1.52999 * 113.61531 * 220.02256 * 9 8 6 12 12 O 1.42905 * 109.46728 * 272.49719 * 11 9 8 13 13 C 1.35896 * 117.00039 * 179.97438 * 12 11 9 14 14 C 1.38699 * 120.04822 * 359.72154 * 13 12 11 15 15 C 1.38255 * 119.93062 * 179.74789 * 14 13 12 16 16 Br 1.89101 * 119.97964 * 180.27188 * 15 14 13 17 17 C 1.38338 * 120.03616 * 0.53245 * 15 14 13 18 18 C 1.38267 * 120.10118 * 359.74129 * 17 15 14 19 19 C 1.50701 * 119.96493 * 180.02562 * 18 17 15 20 20 O 1.42901 * 109.46981 * 244.97877 * 19 18 17 21 21 Si 1.86302 * 109.47248 * 4.97960 * 19 18 17 22 22 C 1.38124 * 120.06678 * 359.97438 * 18 17 15 23 23 C 1.53786 * 87.08292 * 334.56759 * 9 8 6 24 24 H 1.08995 * 109.47322 * 299.99610 * 1 2 3 25 25 H 1.09001 * 109.47401 * 60.00110 * 1 2 3 26 26 H 1.09001 * 109.46642 * 179.97438 * 1 2 3 27 27 H 1.09005 * 109.46416 * 179.97438 * 3 2 1 28 28 H 1.08992 * 109.47403 * 299.99977 * 3 2 1 29 29 H 1.08999 * 109.46968 * 60.00688 * 3 2 1 30 30 H 1.09008 * 109.46714 * 299.99638 * 4 2 1 31 31 H 1.09001 * 109.47550 * 59.99286 * 4 2 1 32 32 H 1.08996 * 109.47132 * 179.97438 * 4 2 1 33 33 H 1.08991 * 113.61045 * 25.44064 * 8 6 5 34 34 H 1.09000 * 113.61369 * 254.53802 * 8 6 5 35 35 H 1.09000 * 109.47486 * 152.49657 * 11 9 8 36 36 H 1.09001 * 109.47362 * 32.48934 * 11 9 8 37 37 H 1.07995 * 120.03293 * 0.02562 * 14 13 12 38 38 H 1.08003 * 119.94459 * 179.76943 * 17 15 14 39 39 H 1.09002 * 109.46850 * 124.97558 * 19 18 17 40 40 H 0.96698 * 114.00153 * 180.02562 * 20 19 18 41 41 H 1.48496 * 109.99855 * 178.68141 * 21 19 18 42 42 H 1.48500 * 109.99863 * 299.99755 * 21 19 18 43 43 H 1.08005 * 120.02080 * 180.02562 * 22 18 17 44 44 H 1.08996 * 113.61664 * 139.97951 * 23 9 8 45 45 H 1.08996 * 113.61560 * 270.80437 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 6 2.0399 1.4426 0.0000 4 6 2.0401 -0.7211 -1.2493 5 8 2.0064 -0.6736 1.1667 6 6 1.5848 -2.0355 1.2643 7 1 0.7236 -2.2582 0.6343 8 6 2.7321 -3.0494 1.1205 9 6 2.0544 -3.8566 2.2402 10 1 1.3215 -4.5776 1.8783 11 6 3.0398 -4.4625 3.2416 12 8 3.4723 -5.7404 2.7704 13 6 4.3571 -6.4177 3.5483 14 6 4.8041 -5.8614 4.7376 15 6 5.7001 -6.5549 5.5297 16 35 6.3046 -5.8010 7.1552 17 6 6.1590 -7.7976 5.1312 18 6 5.7187 -8.3511 3.9432 19 6 6.2201 -9.7054 3.5123 20 8 6.9866 -9.5704 2.3139 21 14 7.2898 -10.4279 4.8557 22 6 4.8189 -7.6646 3.1514 23 6 1.4333 -2.5312 2.7123 24 1 -0.3634 0.5137 0.8900 25 1 -0.3634 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 3.1300 1.4426 0.0005 28 1 1.6766 1.9564 -0.8899 29 1 1.6766 1.9563 0.8900 30 1 1.6767 -1.7488 -1.2493 31 1 1.6767 -0.2073 -2.1393 32 1 3.1300 -0.7207 -1.2495 33 1 3.7065 -2.6485 1.3996 34 1 2.7439 -3.5619 0.1585 35 1 2.5501 -4.5785 4.2085 36 1 3.9016 -3.8036 3.3474 37 1 4.4490 -4.8894 5.0467 38 1 6.8618 -8.3365 5.7494 39 1 5.3721 -10.3653 3.3289 40 1 7.3415 -10.4047 1.9778 41 1 7.7646 -11.7770 4.4563 42 1 8.4496 -9.5375 5.1153 43 1 4.4752 -8.0978 2.2237 44 1 0.3966 -2.6254 3.0353 45 1 2.0520 -1.9894 3.4276 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_17850308_14598386.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 07:48:46 Heat of formation + Delta-G solvation = -56.640748 kcal Electronic energy + Delta-G solvation = -25286.250424 eV Core-core repulsion = 21511.216104 eV Total energy + Delta-G solvation = -3775.034320 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 371.082 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.57610 -40.81283 -39.32347 -38.17454 -37.47539 -33.95283 -33.66252 -32.04948 -30.63683 -29.25391 -28.36424 -28.27761 -27.01508 -26.63432 -23.96614 -23.58489 -22.08108 -20.82463 -20.62859 -18.95397 -18.61680 -17.92522 -17.52879 -17.36361 -17.04612 -16.50929 -16.02662 -15.87260 -15.79089 -15.44809 -14.74338 -14.66707 -14.52144 -14.41822 -14.11478 -13.97584 -13.65898 -13.46185 -13.32271 -13.24949 -13.08814 -12.84239 -12.70496 -12.69197 -12.61117 -12.36382 -12.15369 -11.98621 -11.87230 -11.70687 -11.57319 -11.41787 -11.34042 -11.17897 -10.57290 -10.37050 -9.95995 -9.41754 -4.95903 -0.14190 0.07285 0.44142 1.21992 1.56217 1.89311 2.00471 2.31649 2.73946 3.23045 3.44215 3.54722 3.63522 3.75496 3.76887 3.78319 3.87818 3.90050 3.97261 4.02570 4.08001 4.11352 4.13218 4.23109 4.32922 4.39831 4.52111 4.54985 4.61158 4.66613 4.76663 4.77352 4.77745 4.84018 4.88912 4.90633 4.93087 4.99091 5.00640 5.11413 5.13980 5.17410 5.29820 5.32006 5.35318 5.40964 6.21898 6.41111 6.55920 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.177 4.177 2 C 0.098 3.902 3 C -0.140 4.140 4 C -0.174 4.174 5 O -0.382 6.382 6 C 0.059 3.941 7 H 0.101 0.899 8 C -0.150 4.150 9 C -0.102 4.102 10 H 0.110 0.890 11 C 0.065 3.935 12 O -0.317 6.317 13 C 0.134 3.866 14 C -0.181 4.181 15 C -0.054 4.054 16 Br -0.037 7.037 17 C -0.134 4.134 18 C -0.034 4.034 19 C -0.082 4.082 20 O -0.555 6.555 21 Si 0.753 3.247 22 C -0.120 4.120 23 C -0.122 4.122 24 H 0.060 0.940 25 H 0.076 0.924 26 H 0.063 0.937 27 H 0.056 0.944 28 H 0.084 0.916 29 H 0.059 0.941 30 H 0.060 0.940 31 H 0.075 0.925 32 H 0.055 0.945 33 H 0.079 0.921 34 H 0.071 0.929 35 H 0.080 0.920 36 H 0.068 0.932 37 H 0.152 0.848 38 H 0.146 0.854 39 H 0.107 0.893 40 H 0.398 0.602 41 H -0.277 1.277 42 H -0.297 1.297 43 H 0.143 0.857 44 H 0.090 0.910 45 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.279 -1.394 -0.470 4.524 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.234 4.234 2 C 0.059 3.941 3 C -0.197 4.197 4 C -0.231 4.231 5 O -0.301 6.301 6 C 0.002 3.998 7 H 0.119 0.881 8 C -0.188 4.188 9 C -0.120 4.120 10 H 0.128 0.872 11 C -0.009 4.009 12 O -0.230 6.230 13 C 0.087 3.913 14 C -0.202 4.202 15 C -0.134 4.134 16 Br 0.048 6.952 17 C -0.154 4.154 18 C -0.035 4.035 19 C -0.190 4.190 20 O -0.366 6.366 21 Si 0.658 3.342 22 C -0.139 4.139 23 C -0.159 4.159 24 H 0.079 0.921 25 H 0.095 0.905 26 H 0.082 0.918 27 H 0.075 0.925 28 H 0.102 0.898 29 H 0.078 0.922 30 H 0.079 0.921 31 H 0.094 0.906 32 H 0.074 0.926 33 H 0.098 0.902 34 H 0.090 0.910 35 H 0.098 0.902 36 H 0.086 0.914 37 H 0.169 0.831 38 H 0.163 0.837 39 H 0.125 0.875 40 H 0.249 0.751 41 H -0.203 1.203 42 H -0.225 1.225 43 H 0.161 0.839 44 H 0.108 0.892 45 H 0.108 0.892 Dipole moment (debyes) X Y Z Total from point charges -3.407 -0.736 0.387 3.507 hybrid contribution 0.377 -0.325 -1.535 1.613 sum -3.030 -1.061 -1.147 3.409 Atomic orbital electron populations 1.22446 0.94827 1.02819 1.03284 1.21674 0.93784 0.93281 0.85321 1.21798 1.01560 0.93297 1.03039 1.22446 1.01714 1.00987 0.97991 1.88009 1.74300 1.24213 1.43615 1.23678 0.97129 0.81143 0.97870 0.88115 1.23602 0.99077 0.96805 0.99307 1.22274 0.97740 0.95886 0.96107 0.87151 1.23036 0.97816 0.81500 0.98562 1.86094 1.57251 1.32825 1.46864 1.18959 0.90408 0.92106 0.89817 1.21350 1.01221 1.02314 0.95264 1.21531 1.00658 0.96647 0.94558 1.96791 1.88356 1.83479 1.26533 1.21001 1.01849 0.94802 0.97713 1.19168 0.95288 0.95624 0.93389 1.24943 1.01614 0.96952 0.95526 1.86547 1.71477 1.37970 1.40594 0.94143 0.80377 0.76000 0.83692 1.20532 0.99010 0.92985 1.01369 1.23204 1.02456 0.93696 0.96567 0.92066 0.90457 0.91768 0.92526 0.89754 0.92197 0.92084 0.90577 0.92606 0.90246 0.91044 0.90169 0.91419 0.83072 0.83702 0.87525 0.75054 1.20298 1.22465 0.83942 0.89160 0.89153 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.32 8.38 71.98 0.60 0.93 16 2 C 0.10 0.06 1.11 -10.79 -0.01 0.05 16 3 C -0.14 0.01 8.84 71.98 0.64 0.64 16 4 C -0.17 0.12 8.38 71.98 0.60 0.73 16 5 O -0.38 -1.47 10.00 -148.98 -1.49 -2.96 16 6 C 0.06 -0.02 2.82 31.13 0.09 0.07 16 7 H 0.10 -0.23 5.54 -2.38 -0.01 -0.25 16 8 C -0.15 -0.04 7.47 31.12 0.23 0.20 16 9 C -0.10 0.20 4.01 -10.27 -0.04 0.16 16 10 H 0.11 -0.31 8.14 -2.39 -0.02 -0.33 16 11 C 0.07 -0.04 4.58 71.98 0.33 0.29 16 12 O -0.32 -1.25 10.14 -92.39 -0.94 -2.19 16 13 C 0.13 0.60 6.69 22.51 0.15 0.75 16 14 C -0.18 -0.60 8.78 22.38 0.20 -0.40 16 15 C -0.05 -0.22 6.22 22.30 0.14 -0.08 16 16 Br -0.04 -0.12 33.70 -20.37 -0.69 -0.80 16 17 C -0.13 -0.45 8.41 22.30 0.19 -0.27 16 18 C -0.03 -0.10 5.38 -19.88 -0.11 -0.21 16 19 C -0.08 0.07 2.79 71.24 0.20 0.26 16 20 O -0.56 -1.00 12.81 -148.98 -1.91 -2.91 16 21 Si 0.75 -1.24 29.85 68.60 2.05 0.80 16 22 C -0.12 -0.52 9.62 22.37 0.22 -0.30 16 23 C -0.12 0.29 7.47 31.13 0.23 0.52 16 24 H 0.06 -0.05 8.14 -2.39 -0.02 -0.06 16 25 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 26 H 0.06 -0.18 6.24 -2.39 -0.01 -0.20 16 27 H 0.06 0.08 8.14 -2.38 -0.02 0.06 16 28 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 29 H 0.06 0.04 8.14 -2.39 -0.02 0.02 16 30 H 0.06 -0.07 7.02 -2.38 -0.02 -0.09 16 31 H 0.08 -0.21 8.14 -2.39 -0.02 -0.23 16 32 H 0.05 0.07 8.14 -2.39 -0.02 0.05 16 33 H 0.08 0.21 7.90 -2.39 -0.02 0.19 16 34 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.08 -0.25 7.67 -2.39 -0.02 -0.27 16 36 H 0.07 -0.05 7.35 -2.39 -0.02 -0.07 16 37 H 0.15 0.04 6.30 -2.91 -0.02 0.02 16 38 H 0.15 0.15 4.86 -2.91 -0.01 0.14 16 39 H 0.11 -0.60 7.96 -2.39 -0.02 -0.62 16 40 H 0.40 -2.63 8.74 -74.06 -0.65 -3.28 16 41 H -0.28 -0.43 7.11 99.48 0.71 0.28 16 42 H -0.30 -1.78 7.05 99.48 0.70 -1.08 16 43 H 0.14 0.43 8.06 -2.91 -0.02 0.40 16 44 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 45 H 0.09 -0.13 8.10 -2.39 -0.02 -0.15 16 Total: 0.00 -12.24 378.77 1.05 -11.18 By element: Atomic # 1 Polarization: -6.84 SS G_CDS: 0.37 Total: -6.46 kcal Atomic # 6 Polarization: -0.32 SS G_CDS: 3.65 Total: 3.33 kcal Atomic # 8 Polarization: -3.72 SS G_CDS: -4.33 Total: -8.06 kcal Atomic # 14 Polarization: -1.24 SS G_CDS: 2.05 Total: 0.80 kcal Atomic # 35 Polarization: -0.12 SS G_CDS: -0.69 Total: -0.80 kcal Total: -12.24 1.05 -11.18 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_17850308_14598386.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.457 kcal (2) G-P(sol) polarization free energy of solvation -12.235 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.692 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.051 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -11.184 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.641 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds