Wall clock time and date at job start Mon Mar 8 2021 08:52:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.42901 * 114.00050 * 2 1 4 4 C 1.53009 * 112.90612 * 66.33784 * 3 2 1 5 5 F 1.39899 * 109.46641 * 283.26984 * 4 3 2 6 6 F 1.39899 * 109.47135 * 43.26735 * 4 3 2 7 7 F 1.39902 * 109.47022 * 163.26852 * 4 3 2 8 8 C 1.53778 * 113.61914 * 295.08420 * 3 2 1 9 9 C 1.53787 * 87.07894 * 270.88604 * 8 3 2 10 10 H 1.08998 * 113.60978 * 219.93345 * 9 8 3 11 11 C 1.52993 * 113.61502 * 89.11630 * 9 8 3 12 12 O 1.42897 * 109.47193 * 174.99787 * 11 9 8 13 13 C 1.35897 * 117.00557 * 179.97438 * 12 11 9 14 14 C 1.38692 * 120.04472 * 0.02562 * 13 12 11 15 15 C 1.38262 * 119.92988 * 180.23191 * 14 13 12 16 16 Br 1.89106 * 119.97904 * 179.74481 * 15 14 13 17 17 C 1.38334 * 120.03521 * 359.48706 * 15 14 13 18 18 C 1.38273 * 120.10254 * 0.51012 * 17 15 14 19 19 C 1.50700 * 119.96607 * 179.77219 * 18 17 15 20 20 O 1.42898 * 109.47340 * 119.97960 * 19 18 17 21 21 Si 1.86302 * 109.47109 * 359.97438 * 19 18 17 22 22 C 1.38125 * 120.06157 * 359.74562 * 18 17 15 23 23 C 1.53780 * 87.07978 * 334.56224 * 9 8 3 24 24 H 1.08993 * 109.47139 * 182.28196 * 1 2 3 25 25 H 1.08999 * 109.47218 * 302.28686 * 1 2 3 26 26 H 1.09003 * 109.46720 * 62.28576 * 1 2 3 27 27 H 1.08999 * 113.61331 * 156.33509 * 8 3 2 28 28 H 1.09000 * 113.68951 * 25.44148 * 8 3 2 29 29 H 1.09001 * 109.47614 * 54.99685 * 11 9 8 30 30 H 1.08998 * 109.47069 * 294.99727 * 11 9 8 31 31 H 1.07999 * 120.03976 * 359.94496 * 14 13 12 32 32 H 1.08004 * 119.95001 * 180.28278 * 17 15 14 33 33 H 1.08999 * 109.46585 * 239.97534 * 19 18 17 34 34 H 0.96698 * 113.99616 * 299.99577 * 20 19 18 35 35 H 1.48502 * 109.99768 * 180.02562 * 21 19 18 36 36 H 1.48499 * 110.00084 * 301.31723 * 21 19 18 37 37 H 1.08005 * 120.01255 * 179.97438 * 22 18 17 38 38 H 1.09002 * 113.60994 * 139.97877 * 23 9 8 39 39 H 1.08991 * 113.61732 * 270.88639 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3055 0.0000 4 6 1.7357 2.0796 1.2909 5 9 0.4212 2.5582 1.2770 6 9 1.9116 1.2316 2.3896 7 9 2.6233 3.1568 1.3864 8 6 1.7152 2.1113 -1.2761 9 6 2.9883 1.4862 -1.8707 10 1 3.5814 2.1834 -2.4625 11 6 2.7412 0.1580 -2.5887 12 8 3.9530 -0.2836 -3.2038 13 6 3.9060 -1.4572 -3.8873 14 6 2.7179 -2.1686 -3.9648 15 6 2.6740 -3.3648 -4.6568 16 35 1.0565 -4.3394 -4.7572 17 6 3.8111 -3.8462 -5.2802 18 6 4.9963 -3.1381 -5.2040 19 6 6.2346 -3.6681 -5.8800 20 8 6.6899 -2.7222 -6.8496 21 14 5.8392 -5.2812 -6.7240 22 6 5.0463 -1.9453 -4.5093 23 6 3.4879 1.3219 -0.4257 24 1 -0.3633 -1.0268 0.0409 25 1 -0.3633 0.5489 0.8688 26 1 -0.3633 0.4780 -0.9098 27 1 1.7826 3.1902 -1.1365 28 1 0.8006 1.8065 -1.7848 29 1 1.9751 0.2945 -3.3519 30 1 2.4068 -0.5880 -1.8677 31 1 1.8292 -1.7910 -3.4812 32 1 3.7741 -4.7785 -5.8243 33 1 7.0142 -3.8290 -5.1355 34 1 6.0454 -2.5302 -7.5445 35 1 7.0525 -5.8146 -7.3940 36 1 5.3346 -6.2635 -5.7312 37 1 5.9726 -1.3931 -4.4499 38 1 4.0043 0.3787 -0.2469 39 1 4.0399 2.1850 -0.0537 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_17850308_17321602.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:52:12 Heat of formation + Delta-G solvation = -195.702454 kcal Electronic energy + Delta-G solvation = -29685.096530 eV Core-core repulsion = 24806.745353 eV Total energy + Delta-G solvation = -4878.351177 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.022 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -51.21253 -48.76030 -48.64194 -41.92505 -41.12479 -39.20873 -37.54881 -37.10464 -33.57426 -32.10098 -30.90148 -30.00493 -28.38170 -27.63149 -26.96266 -26.76252 -23.65133 -23.55448 -22.34610 -20.72033 -19.88873 -19.51375 -19.29836 -19.12257 -17.93483 -17.54106 -17.43402 -17.22120 -16.95894 -16.61603 -16.23189 -15.92875 -15.69352 -15.56135 -15.54808 -15.31309 -15.12312 -14.89981 -14.83519 -14.79269 -14.50710 -14.27801 -14.22656 -14.11947 -13.63122 -13.39592 -13.15963 -12.99834 -12.81842 -12.62817 -12.24550 -12.19358 -12.00782 -11.84949 -11.75233 -11.54656 -11.36333 -10.94556 -10.58154 -9.94074 -9.40333 -5.09183 -0.12109 0.09163 0.48268 1.18635 1.50262 1.57969 1.81658 1.92299 1.96270 2.36507 2.47947 2.57200 2.79044 3.14275 3.27060 3.31733 3.41509 3.44147 3.56316 3.74601 3.87733 4.00494 4.02214 4.04852 4.10235 4.14313 4.17259 4.25050 4.28360 4.38804 4.43514 4.48581 4.50476 4.58519 4.65141 4.80820 4.90284 5.01383 5.15044 5.37270 5.54269 6.18846 6.47728 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.332 6.332 3 C 0.038 3.962 4 C 0.437 3.563 5 F -0.181 7.181 6 F -0.174 7.174 7 F -0.174 7.174 8 C -0.143 4.143 9 C -0.098 4.098 10 H 0.108 0.892 11 C 0.067 3.933 12 O -0.305 6.305 13 C 0.143 3.857 14 C -0.178 4.178 15 C -0.045 4.045 16 Br -0.039 7.039 17 C -0.129 4.129 18 C -0.074 4.074 19 C -0.067 4.067 20 O -0.536 6.536 21 Si 0.686 3.314 22 C -0.110 4.110 23 C -0.112 4.112 24 H 0.103 0.897 25 H 0.055 0.945 26 H 0.055 0.945 27 H 0.113 0.887 28 H 0.095 0.905 29 H 0.069 0.931 30 H 0.086 0.914 31 H 0.140 0.860 32 H 0.138 0.862 33 H 0.120 0.880 34 H 0.381 0.619 35 H -0.250 1.250 36 H -0.254 1.254 37 H 0.142 0.858 38 H 0.099 0.901 39 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.420 1.215 -3.076 4.098 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.250 6.250 3 C -0.004 4.004 4 C 0.383 3.617 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.156 7.156 8 C -0.180 4.180 9 C -0.117 4.117 10 H 0.126 0.874 11 C -0.008 4.008 12 O -0.218 6.218 13 C 0.096 3.904 14 C -0.198 4.198 15 C -0.125 4.125 16 Br 0.047 6.953 17 C -0.148 4.148 18 C -0.076 4.076 19 C -0.177 4.177 20 O -0.341 6.341 21 Si 0.587 3.413 22 C -0.129 4.129 23 C -0.149 4.149 24 H 0.121 0.879 25 H 0.074 0.926 26 H 0.074 0.926 27 H 0.132 0.868 28 H 0.113 0.887 29 H 0.087 0.913 30 H 0.104 0.896 31 H 0.158 0.842 32 H 0.155 0.845 33 H 0.137 0.863 34 H 0.228 0.772 35 H -0.175 1.175 36 H -0.179 1.179 37 H 0.160 0.840 38 H 0.118 0.882 39 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -2.079 -0.053 -2.714 3.419 hybrid contribution -0.197 0.838 1.068 1.371 sum -2.276 0.785 -1.647 2.917 Atomic orbital electron populations 1.23167 0.79424 1.04511 1.01617 1.88088 1.21190 1.21889 1.93847 1.24049 1.00102 0.86361 0.89904 1.21162 0.74271 0.78698 0.87614 1.93188 1.37099 1.89141 1.96852 1.93224 1.94942 1.70407 1.56919 1.93184 1.68512 1.57306 1.96572 1.23598 0.99568 1.01198 0.93634 1.22063 0.97596 0.96373 0.95628 0.87391 1.22818 0.85387 0.95969 0.96639 1.86067 1.35847 1.34995 1.64909 1.18845 0.93411 0.85750 0.92358 1.21225 0.98520 0.95946 1.04121 1.21461 0.92822 0.96253 1.01964 1.96811 1.27825 1.72905 1.97752 1.20876 0.91346 1.00820 1.01801 1.20131 0.95024 0.94623 0.97800 1.25077 0.95672 1.02581 0.94417 1.86526 1.44540 1.63499 1.39570 0.94673 0.85142 0.75397 0.86068 1.20401 0.97702 0.96426 0.98362 1.23275 0.90948 1.05864 0.94833 0.87908 0.92631 0.92639 0.86822 0.88663 0.91283 0.89601 0.84208 0.84484 0.86276 0.77183 1.17493 1.17860 0.83999 0.88246 0.86424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.44 101.05 1.05 1.04 16 2 O -0.33 0.14 8.35 -35.23 -0.29 -0.15 16 3 C 0.04 -0.04 0.85 -89.80 -0.08 -0.12 16 4 C 0.44 0.29 2.52 37.16 0.09 0.38 16 5 F -0.18 -0.17 15.27 2.25 0.03 -0.13 16 6 F -0.17 -0.44 17.09 2.25 0.04 -0.40 16 7 F -0.17 -0.14 15.82 2.25 0.04 -0.10 16 8 C -0.14 0.44 6.52 -25.92 -0.17 0.27 16 9 C -0.10 0.25 4.20 -89.81 -0.38 -0.12 16 10 H 0.11 -0.33 8.14 -51.93 -0.42 -0.75 16 11 C 0.07 -0.11 4.32 37.15 0.16 0.05 16 12 O -0.30 -0.14 10.14 -19.42 -0.20 -0.34 16 13 C 0.14 0.10 6.69 -39.22 -0.26 -0.16 16 14 C -0.18 -0.04 8.78 -39.40 -0.35 -0.38 16 15 C -0.05 -0.02 6.22 -39.54 -0.25 -0.27 16 16 Br -0.04 -0.01 33.70 -68.01 -2.29 -2.30 16 17 C -0.13 0.01 8.41 -39.53 -0.33 -0.32 16 18 C -0.07 0.01 5.39 -104.65 -0.56 -0.55 16 19 C -0.07 0.05 2.82 36.01 0.10 0.16 16 20 O -0.54 0.27 12.77 -35.23 -0.45 -0.18 16 21 Si 0.69 -0.92 29.79 -169.99 -5.06 -5.98 16 22 C -0.11 -0.06 9.55 -39.43 -0.38 -0.44 16 23 C -0.11 0.20 6.89 -25.92 -0.18 0.02 16 24 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 25 H 0.06 -0.08 6.29 -51.93 -0.33 -0.40 16 26 H 0.06 -0.20 6.74 -51.93 -0.35 -0.55 16 27 H 0.11 -0.43 8.07 -51.93 -0.42 -0.85 16 28 H 0.09 -0.38 6.68 -51.93 -0.35 -0.73 16 29 H 0.07 -0.19 7.66 -51.93 -0.40 -0.58 16 30 H 0.09 -0.10 5.64 -51.93 -0.29 -0.40 16 31 H 0.14 -0.15 6.30 -52.49 -0.33 -0.48 16 32 H 0.14 -0.19 4.87 -52.48 -0.26 -0.45 16 33 H 0.12 -0.07 7.96 -51.93 -0.41 -0.49 16 34 H 0.38 -1.64 8.70 45.56 0.40 -1.25 16 35 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 36 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 37 H 0.14 0.05 8.06 -52.48 -0.42 -0.38 16 38 H 0.10 -0.11 8.10 -51.93 -0.42 -0.53 16 39 H 0.12 -0.31 7.00 -51.93 -0.36 -0.67 16 LS Contribution 349.07 15.07 5.26 5.26 Total: 0.00 -5.48 349.07 -8.43 -13.91 By element: Atomic # 1 Polarization: -5.15 SS G_CDS: -3.99 Total: -9.13 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: -1.52 Total: -0.44 kcal Atomic # 8 Polarization: 0.27 SS G_CDS: -0.94 Total: -0.67 kcal Atomic # 9 Polarization: -0.75 SS G_CDS: 0.11 Total: -0.64 kcal Atomic # 14 Polarization: -0.92 SS G_CDS: -5.06 Total: -5.98 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 5.26 Total: 5.26 kcal Total: -5.48 -8.43 -13.91 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_17850308_17321602.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -181.793 kcal (2) G-P(sol) polarization free energy of solvation -5.480 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -187.272 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.430 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.910 kcal (6) G-S(sol) free energy of system = (1) + (5) -195.702 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds