Wall clock time and date at job start Mon Mar 8 2021 08:42:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86297 * 109.47215 * 2 1 4 4 C 1.50700 * 109.47147 * 120.00387 * 2 1 3 5 5 C 1.38185 * 119.99875 * 254.97954 * 4 2 1 6 6 C 1.38255 * 120.10251 * 180.02562 * 5 4 2 7 7 C 1.38362 * 120.11346 * 359.97241 * 6 5 4 8 8 Cl 1.73598 * 119.99927 * 180.02562 * 7 6 5 9 9 C 1.38445 * 120.00634 * 359.79082 * 7 6 5 10 10 F 1.35105 * 120.05287 * 180.24772 * 9 7 6 11 11 C 1.38678 * 120.00641 * 74.99696 * 4 2 1 12 12 O 1.35952 * 120.05720 * 359.95412 * 11 4 2 13 13 C 1.42903 * 116.99815 * 90.00071 * 12 11 4 14 14 C 1.53002 * 109.47260 * 180.02562 * 13 12 11 15 15 H 1.09002 * 109.47067 * 305.00171 * 14 13 12 16 16 C 1.53005 * 109.46982 * 64.99823 * 14 13 12 17 17 C 1.52999 * 109.47159 * 179.97438 * 16 14 13 18 18 C 1.52997 * 109.47317 * 300.00546 * 17 16 14 19 19 H 1.09002 * 109.47153 * 299.99641 * 18 17 16 20 20 O 1.42896 * 109.46906 * 179.97438 * 18 17 16 21 21 C 1.53000 * 109.47060 * 59.99960 * 18 17 16 22 22 C 1.52997 * 109.47143 * 185.00153 * 14 13 12 23 23 H 0.96702 * 114.00051 * 300.00074 * 1 2 3 24 24 H 1.09005 * 109.47195 * 240.00040 * 2 1 3 25 25 H 1.48507 * 109.99816 * 178.67963 * 3 2 1 26 26 H 1.48498 * 110.00005 * 299.99791 * 3 2 1 27 27 H 1.08000 * 119.94790 * 359.97438 * 5 4 2 28 28 H 1.07995 * 119.94327 * 179.97438 * 6 5 4 29 29 H 1.09000 * 109.46851 * 60.00049 * 13 12 11 30 30 H 1.09000 * 109.47185 * 300.00111 * 13 12 11 31 31 H 1.09000 * 109.47360 * 300.00293 * 16 14 13 32 32 H 1.09002 * 109.46935 * 60.00267 * 16 14 13 33 33 H 1.08996 * 109.46929 * 179.97438 * 17 16 14 34 34 H 1.09002 * 109.46716 * 60.00455 * 17 16 14 35 35 H 0.96699 * 114.00604 * 59.99725 * 20 18 17 36 36 H 1.08992 * 109.47399 * 59.99823 * 21 18 17 37 37 H 1.09004 * 109.46724 * 180.02562 * 21 18 17 38 38 H 1.08993 * 109.47194 * 59.99677 * 22 14 13 39 39 H 1.09002 * 109.46695 * 299.99691 * 22 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 2.4540 0.0164 2.2830 6 6 2.9160 -0.6332 3.4126 7 6 2.8559 -2.0132 3.4931 8 17 3.4362 -2.8258 4.9132 9 6 2.3286 -2.7457 2.4433 10 9 2.2649 -4.0929 2.5231 11 6 1.8694 -2.0938 1.3063 12 8 1.3548 -2.8102 0.2718 13 6 2.2684 -3.2325 -0.7427 14 6 1.5118 -4.0186 -1.8153 15 1 0.9700 -4.8412 -1.3485 16 6 0.5211 -3.0919 -2.5231 17 6 -0.2350 -3.8778 -3.5961 18 6 0.7598 -4.4354 -4.6160 19 1 1.3016 -3.6126 -5.0825 20 8 0.0535 -5.1698 -5.6179 21 6 1.7503 -5.3621 -3.9082 22 6 2.5063 -4.5766 -2.8353 23 1 -0.3933 0.4417 0.7651 24 1 1.7923 -0.5138 -0.8900 25 1 3.5346 1.7702 0.0322 26 1 1.5615 2.4678 -1.2085 27 1 2.5025 1.0937 2.2227 28 1 3.3244 -0.0626 4.2335 29 1 3.0353 -3.8677 -0.2993 30 1 2.7374 -2.3591 -1.1958 31 1 -0.1873 -2.6943 -1.7964 32 1 1.0630 -2.2693 -2.9898 33 1 -0.9411 -3.2177 -4.1000 34 1 -0.7768 -4.7006 -3.1297 35 1 -0.5934 -4.6443 -6.1082 36 1 1.2086 -6.1848 -3.4418 37 1 2.4594 -5.7589 -4.6348 38 1 3.2120 -5.2367 -2.3311 39 1 3.0481 -3.7540 -3.3021 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_18323488_16737256.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:42:34 Heat of formation + Delta-G solvation = -154.066534 kcal Electronic energy + Delta-G solvation = -25224.800921 eV Core-core repulsion = 21267.181374 eV Total energy + Delta-G solvation = -3957.619547 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.091 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -50.03824 -41.47819 -40.19920 -38.80073 -38.01232 -37.30201 -36.63761 -32.55710 -32.24481 -31.85634 -30.78645 -27.24253 -26.36054 -24.09812 -23.75852 -23.04199 -22.36286 -20.92812 -19.47357 -18.79353 -18.41926 -18.18350 -17.57566 -17.28351 -16.71220 -16.57415 -16.29810 -16.13556 -15.64412 -15.51596 -15.44184 -14.92024 -14.66660 -14.52057 -14.21759 -14.06677 -13.92502 -13.56605 -13.40307 -13.27155 -13.23354 -12.57045 -12.51162 -12.28549 -12.19955 -12.13427 -12.02805 -11.72962 -11.64069 -11.27549 -11.08686 -10.71381 -10.55849 -9.97913 -9.94723 -5.21720 -0.46168 -0.34952 0.78993 1.06963 1.47616 1.81250 1.84482 2.37657 2.80952 3.15577 3.26283 3.35877 3.52335 3.57694 3.65673 3.70161 3.76181 3.93271 4.00915 4.10413 4.15154 4.25354 4.30256 4.37525 4.37986 4.43675 4.45265 4.51142 4.60049 4.70092 4.76620 4.86327 4.91875 5.01372 5.05420 5.11916 5.14434 5.15009 5.34218 5.40236 6.21695 6.45207 6.70735 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.061 4.061 3 Si 0.684 3.316 4 C -0.110 4.110 5 C -0.100 4.100 6 C -0.082 4.082 7 C -0.060 4.060 8 Cl -0.036 7.036 9 C 0.091 3.909 10 F -0.116 7.116 11 C 0.103 3.897 12 O -0.310 6.310 13 C 0.068 3.932 14 C -0.086 4.086 15 H 0.086 0.914 16 C -0.109 4.109 17 C -0.151 4.151 18 C 0.103 3.897 19 H 0.054 0.946 20 O -0.569 6.569 21 C -0.111 4.111 22 C -0.110 4.110 23 H 0.379 0.621 24 H 0.113 0.887 25 H -0.253 1.253 26 H -0.249 1.249 27 H 0.150 0.850 28 H 0.154 0.846 29 H 0.058 0.942 30 H 0.055 0.945 31 H 0.080 0.920 32 H 0.060 0.940 33 H 0.066 0.934 34 H 0.072 0.928 35 H 0.379 0.621 36 H 0.072 0.928 37 H 0.073 0.927 38 H 0.073 0.927 39 H 0.067 0.933 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.847 5.476 1.087 5.647 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.172 4.172 3 Si 0.585 3.415 4 C -0.112 4.112 5 C -0.118 4.118 6 C -0.100 4.100 7 C -0.088 4.088 8 Cl -0.007 7.007 9 C 0.071 3.929 10 F -0.094 7.094 11 C 0.057 3.943 12 O -0.227 6.227 13 C -0.006 4.006 14 C -0.105 4.105 15 H 0.104 0.896 16 C -0.147 4.147 17 C -0.189 4.189 18 C 0.044 3.956 19 H 0.072 0.928 20 O -0.375 6.375 21 C -0.148 4.148 22 C -0.148 4.148 23 H 0.226 0.774 24 H 0.130 0.870 25 H -0.177 1.177 26 H -0.173 1.173 27 H 0.167 0.833 28 H 0.171 0.829 29 H 0.076 0.924 30 H 0.073 0.927 31 H 0.099 0.901 32 H 0.079 0.921 33 H 0.085 0.915 34 H 0.091 0.909 35 H 0.226 0.774 36 H 0.091 0.909 37 H 0.091 0.909 38 H 0.092 0.908 39 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 1.668 5.077 0.411 5.360 hybrid contribution -0.013 -0.509 -0.052 0.512 sum 1.655 4.568 0.359 4.872 Atomic orbital electron populations 1.86585 1.16055 1.81615 1.48858 1.25042 0.86091 1.09632 0.96431 0.94905 0.81277 0.77321 0.88024 1.20763 0.99514 0.92782 0.98093 1.20936 0.98490 1.00021 0.92334 1.21027 0.98777 0.91119 0.99108 1.20994 1.03978 0.93615 0.90218 1.98429 1.86675 1.79049 1.36556 1.17872 1.01791 0.78094 0.95185 1.91574 1.93885 1.27654 1.96271 1.18246 0.98258 0.89633 0.88135 1.86149 1.34030 1.70975 1.31522 1.22950 0.91757 0.98054 0.87817 1.21216 0.96858 0.98456 0.93941 0.89558 1.21502 0.98281 0.97286 0.97626 1.22271 0.98554 1.00534 0.97569 1.21846 0.92318 0.93509 0.87907 0.92840 1.86514 1.57486 1.41446 1.52046 1.21424 0.97701 0.98283 0.97414 1.21474 0.97432 1.00079 0.95794 0.77406 0.86996 1.17692 1.17315 0.83320 0.82870 0.92352 0.92668 0.90094 0.92133 0.91523 0.90932 0.77399 0.90881 0.90856 0.90799 0.91429 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.34 12.88 -35.23 -0.45 -0.11 16 2 C -0.06 0.08 2.38 36.01 0.09 0.17 16 3 Si 0.68 -1.85 29.92 -169.99 -5.09 -6.94 16 4 C -0.11 0.09 5.27 -104.48 -0.55 -0.46 16 5 C -0.10 0.28 8.66 -39.59 -0.34 -0.07 16 6 C -0.08 0.16 9.83 -39.53 -0.39 -0.23 16 7 C -0.06 -0.04 6.32 -39.46 -0.25 -0.29 16 8 Cl -0.04 -0.04 28.61 -51.86 -1.48 -1.53 16 9 C 0.09 0.19 7.28 -39.27 -0.29 -0.09 16 10 F -0.12 -0.44 16.68 2.25 0.04 -0.41 16 11 C 0.10 0.15 5.70 -39.18 -0.22 -0.07 16 12 O -0.31 -0.69 8.83 -19.59 -0.17 -0.86 16 13 C 0.07 0.02 5.21 37.16 0.19 0.21 16 14 C -0.09 0.01 2.43 -90.62 -0.22 -0.21 16 15 H 0.09 0.08 8.14 -51.93 -0.42 -0.34 16 16 C -0.11 -0.01 5.10 -26.73 -0.14 -0.15 16 17 C -0.15 -0.01 5.54 -26.73 -0.15 -0.16 16 18 C 0.10 0.05 3.47 -26.73 -0.09 -0.05 16 19 H 0.05 -0.01 8.14 -51.93 -0.42 -0.43 16 20 O -0.57 -0.93 13.32 -35.23 -0.47 -1.40 16 21 C -0.11 -0.04 5.57 -26.75 -0.15 -0.19 16 22 C -0.11 0.10 5.20 -26.75 -0.14 -0.04 16 23 H 0.38 -1.74 8.70 45.56 0.40 -1.34 16 24 H 0.11 -0.06 6.55 -51.93 -0.34 -0.40 16 25 H -0.25 0.13 7.11 56.52 0.40 0.53 16 26 H -0.25 -0.17 7.11 56.52 0.40 0.23 16 27 H 0.15 -0.86 5.12 -52.49 -0.27 -1.13 16 28 H 0.15 -0.66 8.06 -52.49 -0.42 -1.08 16 29 H 0.06 0.01 8.14 -51.93 -0.42 -0.41 16 30 H 0.06 -0.04 7.10 -51.93 -0.37 -0.41 16 31 H 0.08 0.13 7.82 -51.93 -0.41 -0.28 16 32 H 0.06 -0.01 8.14 -51.93 -0.42 -0.44 16 33 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 34 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 35 H 0.38 -0.83 9.08 45.56 0.41 -0.42 16 36 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 37 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 LS Contribution 336.27 15.07 5.07 5.07 Total: 0.00 -6.66 336.27 -9.63 -16.29 By element: Atomic # 1 Polarization: -4.06 SS G_CDS: -4.42 Total: -8.48 kcal Atomic # 6 Polarization: 1.03 SS G_CDS: -2.65 Total: -1.62 kcal Atomic # 8 Polarization: -1.28 SS G_CDS: -1.10 Total: -2.38 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.85 SS G_CDS: -5.09 Total: -6.94 kcal Atomic # 17 Polarization: -0.04 SS G_CDS: -1.48 Total: -1.53 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -6.66 -9.63 -16.29 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_18323488_16737256.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -137.780 kcal (2) G-P(sol) polarization free energy of solvation -6.658 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -144.438 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.629 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.286 kcal (6) G-S(sol) free energy of system = (1) + (5) -154.067 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds