Wall clock time and date at job start Mon Mar 8 2021 10:07:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.36090 * 117.00210 * 2 1 4 4 C 1.38955 * 120.08828 * 269.72191 * 3 2 1 5 5 O 1.36002 * 120.04281 * 0.02562 * 4 3 2 6 6 C 1.42900 * 117.00067 * 180.02562 * 5 4 3 7 7 C 1.52999 * 109.47305 * 179.97438 * 6 5 4 8 8 H 1.08999 * 109.47312 * 305.00027 * 7 6 5 9 9 C 1.53003 * 109.47057 * 65.00086 * 7 6 5 10 10 C 1.52991 * 109.47271 * 180.02562 * 9 7 6 11 11 C 1.53000 * 109.47337 * 300.00064 * 10 9 7 12 12 H 1.09005 * 109.47130 * 300.00347 * 11 10 9 13 13 O 1.42895 * 109.47277 * 180.02562 * 11 10 9 14 14 C 1.52995 * 109.47208 * 59.99726 * 11 10 9 15 15 C 1.53002 * 109.46968 * 184.99885 * 7 6 5 16 16 C 1.38688 * 119.91200 * 179.74483 * 4 3 2 17 17 C 1.38206 * 120.08835 * 0.52829 * 16 4 3 18 18 C 1.50695 * 119.90959 * 179.76550 * 17 16 4 19 19 O 1.42903 * 109.47372 * 299.97958 * 18 17 16 20 20 Si 1.86303 * 109.47105 * 179.97438 * 18 17 16 21 21 C 1.38249 * 120.17995 * 359.74374 * 17 16 4 22 22 C 1.38651 * 120.08547 * 359.97438 * 21 17 16 23 23 O 1.36000 * 120.04015 * 180.02562 * 22 21 17 24 24 H 1.09002 * 109.47382 * 300.00356 * 1 2 3 25 25 H 1.09001 * 109.46938 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.46926 * 60.00463 * 1 2 3 27 27 H 1.09000 * 109.47329 * 299.99718 * 6 5 4 28 28 H 1.09003 * 109.47424 * 59.99664 * 6 5 4 29 29 H 1.09004 * 109.46817 * 300.00070 * 9 7 6 30 30 H 1.08999 * 109.47108 * 59.99815 * 9 7 6 31 31 H 1.09004 * 109.47243 * 180.02562 * 10 9 7 32 32 H 1.08999 * 109.47217 * 59.99868 * 10 9 7 33 33 H 0.96703 * 114.00604 * 60.00185 * 13 11 10 34 34 H 1.09001 * 109.47536 * 180.02562 * 14 11 10 35 35 H 1.08999 * 109.46968 * 60.00427 * 14 11 10 36 36 H 1.08999 * 109.47219 * 300.00198 * 15 7 6 37 37 H 1.08996 * 109.47245 * 60.00262 * 15 7 6 38 38 H 1.08005 * 119.95408 * 180.25006 * 16 4 3 39 39 H 1.09000 * 109.47657 * 59.98276 * 18 17 16 40 40 H 0.96703 * 113.99715 * 180.02562 * 19 18 17 41 41 H 1.48503 * 110.00020 * 298.68015 * 20 18 17 42 42 H 1.48504 * 109.99997 * 59.99982 * 20 18 17 43 43 H 1.07997 * 119.95577 * 179.97438 * 21 17 16 44 44 H 0.96693 * 114.00081 * 269.97514 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0469 1.2125 0.0000 4 6 2.3684 1.8306 -1.2023 5 8 2.0655 1.2247 -2.3816 6 6 2.4258 1.9177 -3.5783 7 6 2.0091 1.0872 -4.7938 8 1 2.4456 0.0911 -4.7202 9 6 0.4839 0.9738 -4.8354 10 6 0.0672 0.1427 -6.0505 11 6 0.5630 0.8231 -7.3280 12 1 0.1266 1.8192 -7.4021 13 8 0.1733 0.0472 -8.4629 14 6 2.0882 0.9365 -7.2865 15 6 2.5049 1.7682 -6.0710 16 6 2.9933 3.0687 -1.1981 17 6 3.3061 3.6829 -0.0001 18 6 3.9898 5.0258 -0.0002 19 8 5.2459 4.9208 -0.6736 20 14 4.2711 5.5796 1.7562 21 6 2.9930 3.0688 1.1983 22 6 2.3631 1.8336 1.2026 23 8 2.0551 1.2306 2.3820 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 -0.8901 27 1 1.9192 2.8824 -3.6061 28 1 3.5045 2.0732 -3.5975 29 1 0.1307 0.4886 -3.9254 30 1 0.0474 1.9698 -4.9090 31 1 -1.0195 0.0623 -6.0803 32 1 0.5037 -0.8533 -5.9764 33 1 -0.7829 -0.0659 -8.5526 34 1 2.4414 1.4216 -8.1964 35 1 2.5247 -0.0596 -7.2124 36 1 2.0684 2.7642 -6.1446 37 1 3.5915 1.8490 -6.0415 38 1 3.2398 3.5515 -2.1322 39 1 3.3617 5.7533 -0.5143 40 1 5.7423 5.7498 -0.7114 41 1 2.9702 5.7234 2.4579 42 1 5.1262 4.5960 2.4681 43 1 3.2395 3.5517 2.1323 44 1 2.7527 0.6546 2.7232 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_18340330_16737256.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:07:59 Heat of formation + Delta-G solvation = -178.744108 kcal Electronic energy + Delta-G solvation = -26784.903068 eV Core-core repulsion = 22862.565187 eV Total energy + Delta-G solvation = -3922.337882 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 311.154 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -41.87136 -40.44532 -39.37272 -38.87636 -38.07630 -36.96396 -36.43135 -32.40585 -31.91036 -31.31820 -30.52090 -28.23803 -27.04083 -25.88123 -23.95884 -23.67854 -22.60326 -22.13596 -20.94497 -19.65772 -18.63111 -18.57895 -18.24849 -18.12223 -17.92885 -17.23964 -16.53893 -16.36748 -16.25480 -15.85903 -15.62279 -15.53985 -15.30098 -14.82058 -14.80867 -14.65018 -14.20752 -14.16964 -13.66577 -13.33128 -13.29679 -13.26483 -12.94600 -12.73944 -12.61247 -12.45037 -12.21050 -12.15325 -11.99641 -11.87590 -11.64355 -11.63565 -11.18031 -10.82919 -10.75867 -10.46669 -9.67058 -9.27874 -5.04342 -0.12557 0.12011 1.17838 1.57918 1.89064 1.92222 2.18546 2.76265 3.10369 3.13742 3.32403 3.53638 3.60512 3.63294 3.71138 3.86242 3.91632 3.98529 4.05257 4.14649 4.18750 4.25796 4.26438 4.33313 4.36865 4.38909 4.41504 4.44970 4.48423 4.52987 4.71169 4.78713 4.84907 4.88026 4.97175 5.00965 5.04099 5.08168 5.08610 5.21343 5.23449 5.31415 5.35441 6.06153 6.40458 6.49355 6.67653 6.69183 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.038 3.962 2 O -0.318 6.318 3 C 0.040 3.960 4 C 0.134 3.866 5 O -0.297 6.297 6 C 0.059 3.941 7 C -0.087 4.087 8 H 0.086 0.914 9 C -0.111 4.111 10 C -0.152 4.152 11 C 0.103 3.897 12 H 0.055 0.945 13 O -0.569 6.569 14 C -0.111 4.111 15 C -0.110 4.110 16 C -0.178 4.178 17 C -0.023 4.023 18 C -0.073 4.073 19 O -0.544 6.544 20 Si 0.686 3.314 21 C -0.178 4.178 22 C 0.137 3.863 23 O -0.487 6.487 24 H 0.048 0.952 25 H 0.095 0.905 26 H 0.045 0.955 27 H 0.065 0.935 28 H 0.068 0.932 29 H 0.073 0.927 30 H 0.063 0.937 31 H 0.066 0.934 32 H 0.072 0.928 33 H 0.379 0.621 34 H 0.074 0.926 35 H 0.072 0.928 36 H 0.069 0.931 37 H 0.075 0.925 38 H 0.141 0.859 39 H 0.079 0.921 40 H 0.385 0.615 41 H -0.253 1.253 42 H -0.249 1.249 43 H 0.131 0.869 44 H 0.399 0.601 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.280 4.977 -0.597 5.020 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 O -0.234 6.234 3 C -0.005 4.005 4 C 0.087 3.913 5 O -0.210 6.210 6 C -0.016 4.016 7 C -0.105 4.105 8 H 0.105 0.895 9 C -0.148 4.148 10 C -0.190 4.190 11 C 0.044 3.956 12 H 0.073 0.927 13 O -0.375 6.375 14 C -0.149 4.149 15 C -0.147 4.147 16 C -0.196 4.196 17 C -0.024 4.024 18 C -0.184 4.184 19 O -0.351 6.351 20 Si 0.587 3.413 21 C -0.196 4.196 22 C 0.092 3.908 23 O -0.298 6.298 24 H 0.067 0.933 25 H 0.113 0.887 26 H 0.064 0.936 27 H 0.083 0.917 28 H 0.086 0.914 29 H 0.092 0.908 30 H 0.082 0.918 31 H 0.085 0.915 32 H 0.091 0.909 33 H 0.226 0.774 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.087 0.913 37 H 0.093 0.907 38 H 0.159 0.841 39 H 0.097 0.903 40 H 0.233 0.767 41 H -0.178 1.178 42 H -0.173 1.173 43 H 0.149 0.851 44 H 0.256 0.744 Dipole moment (debyes) X Y Z Total from point charges 0.080 4.068 0.005 4.068 hybrid contribution -0.598 -0.200 -0.187 0.658 sum -0.518 3.867 -0.181 3.906 Atomic orbital electron populations 1.23018 0.78631 1.03359 1.00619 1.86079 1.20165 1.23166 1.94038 1.18283 1.04158 0.88794 0.89285 1.19196 0.95290 0.91030 0.85762 1.86162 1.77061 1.46042 1.11685 1.23008 1.00345 0.95760 0.82484 1.21227 0.96922 1.00369 0.92020 0.89537 1.21509 0.94500 1.00475 0.98347 1.22276 1.01166 1.00487 0.95043 1.21843 0.95629 0.93413 0.84698 0.92749 1.86518 1.28473 1.75217 1.47264 1.21449 0.93849 1.01392 0.98187 1.21486 1.01489 0.99109 0.92627 1.21026 1.03977 0.95226 0.99416 1.18975 0.96382 0.94800 0.92193 1.24687 0.87598 0.96245 1.09853 1.86482 1.30706 1.38256 1.79618 0.95344 0.83338 0.88128 0.74519 1.20980 1.04219 0.96640 0.97757 1.18236 0.96637 0.91266 0.84670 1.84772 1.45741 1.64726 1.34513 0.93330 0.88663 0.93597 0.91706 0.91368 0.90814 0.91810 0.91529 0.90879 0.77383 0.90772 0.90886 0.91257 0.90661 0.84091 0.90306 0.76738 1.17762 1.17339 0.85136 0.74357 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 0.08 11.13 101.05 1.13 1.20 16 2 O -0.32 -1.51 9.98 -45.28 -0.45 -1.96 16 3 C 0.04 0.18 5.75 -39.04 -0.22 -0.05 16 4 C 0.13 0.47 6.70 -39.15 -0.26 0.21 16 5 O -0.30 -0.85 9.45 -34.35 -0.32 -1.17 16 6 C 0.06 -0.01 4.12 37.16 0.15 0.15 16 7 C -0.09 0.06 2.43 -90.62 -0.22 -0.16 16 8 H 0.09 0.03 8.14 -51.93 -0.42 -0.39 16 9 C -0.11 0.07 5.10 -26.73 -0.14 -0.07 16 10 C -0.15 0.09 5.54 -26.74 -0.15 -0.05 16 11 C 0.10 -0.01 3.47 -26.73 -0.09 -0.11 16 12 H 0.05 -0.04 8.14 -51.93 -0.42 -0.46 16 13 O -0.57 -0.66 13.32 -35.23 -0.47 -1.13 16 14 C -0.11 0.03 5.58 -26.70 -0.15 -0.12 16 15 C -0.11 0.17 5.21 -26.70 -0.14 0.03 16 16 C -0.18 -0.41 8.60 -39.43 -0.34 -0.75 16 17 C -0.02 -0.06 5.42 -104.63 -0.57 -0.62 16 18 C -0.07 0.03 2.81 36.00 0.10 0.13 16 19 O -0.54 0.30 12.74 -35.23 -0.45 -0.15 16 20 Si 0.69 -0.84 29.78 -169.99 -5.06 -5.90 16 21 C -0.18 -0.57 8.60 -39.42 -0.34 -0.91 16 22 C 0.14 0.52 6.71 -39.15 -0.26 0.25 16 23 O -0.49 -1.30 13.29 -34.31 -0.46 -1.76 16 24 H 0.05 0.10 8.14 -51.93 -0.42 -0.33 16 25 H 0.09 0.02 8.14 -51.93 -0.42 -0.40 16 26 H 0.05 0.07 8.14 -51.93 -0.42 -0.35 16 27 H 0.06 -0.08 7.65 -51.93 -0.40 -0.47 16 28 H 0.07 -0.04 7.68 -51.93 -0.40 -0.44 16 29 H 0.07 0.04 7.82 -51.93 -0.41 -0.37 16 30 H 0.06 -0.07 8.14 -51.93 -0.42 -0.49 16 31 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 32 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 33 H 0.38 -1.01 9.08 45.56 0.41 -0.60 16 34 H 0.07 0.00 8.14 -51.93 -0.42 -0.42 16 35 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 36 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 38 H 0.14 0.08 6.29 -52.48 -0.33 -0.25 16 39 H 0.08 -0.18 7.96 -51.93 -0.41 -0.60 16 40 H 0.38 -2.17 8.74 45.56 0.40 -1.77 16 41 H -0.25 -0.37 7.11 56.52 0.40 0.03 16 42 H -0.25 -0.48 7.11 56.52 0.40 -0.08 16 43 H 0.13 0.34 4.87 -52.49 -0.26 0.08 16 44 H 0.40 -0.63 9.06 45.56 0.41 -0.22 16 LS Contribution 356.81 15.07 5.38 5.38 Total: 0.00 -8.94 356.81 -8.58 -17.52 By element: Atomic # 1 Polarization: -4.71 SS G_CDS: -5.25 Total: -9.96 kcal Atomic # 6 Polarization: 0.64 SS G_CDS: -1.50 Total: -0.86 kcal Atomic # 8 Polarization: -4.02 SS G_CDS: -2.15 Total: -6.17 kcal Atomic # 14 Polarization: -0.84 SS G_CDS: -5.06 Total: -5.90 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -8.94 -8.58 -17.52 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_18340330_16737256.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -161.225 kcal (2) G-P(sol) polarization free energy of solvation -8.936 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -170.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.583 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.519 kcal (6) G-S(sol) free energy of system = (1) + (5) -178.744 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds