Wall clock time and date at job start Mon Mar 8 2021 10:30:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35994 * 116.99745 * 2 1 4 4 C 1.39155 * 120.07385 * 90.00388 * 3 2 1 5 5 O 1.35996 * 120.07034 * 359.69614 * 4 3 2 6 6 C 1.42895 * 117.00028 * 180.02562 * 5 4 3 7 7 C 1.52998 * 109.47431 * 180.02562 * 6 5 4 8 8 H 1.08998 * 112.84653 * 316.19773 * 7 6 5 9 9 C 1.53784 * 113.61289 * 87.50390 * 7 6 5 10 10 C 1.53775 * 87.08072 * 139.98379 * 9 7 6 11 11 H 1.08999 * 113.62079 * 89.11483 * 10 9 7 12 12 O 1.42901 * 113.61420 * 220.01548 * 10 9 7 13 13 C 1.53775 * 87.08220 * 334.56481 * 10 9 7 14 14 C 1.38558 * 119.85524 * 179.72156 * 4 3 2 15 15 C 1.38247 * 119.99917 * 359.97438 * 14 4 3 16 16 C 1.38245 * 120.14442 * 0.02562 * 15 14 4 17 17 C 1.38237 * 120.15353 * 359.95521 * 16 15 14 18 18 C 1.50701 * 120.00527 * 180.02562 * 17 16 15 19 19 O 1.42894 * 109.47282 * 105.02376 * 18 17 16 20 20 Si 1.86295 * 109.46839 * 345.01854 * 18 17 16 21 21 H 1.09002 * 109.47422 * 180.02562 * 1 2 3 22 22 H 1.08997 * 109.47718 * 299.99658 * 1 2 3 23 23 H 1.09004 * 109.47518 * 60.00293 * 1 2 3 24 24 H 1.09007 * 109.46889 * 300.00032 * 6 5 4 25 25 H 1.09000 * 109.47312 * 59.99992 * 6 5 4 26 26 H 1.09006 * 113.60795 * 254.53060 * 9 7 6 27 27 H 1.08996 * 113.61486 * 25.42892 * 9 7 6 28 28 H 0.96695 * 114.00332 * 277.49533 * 12 10 9 29 29 H 1.09006 * 113.61679 * 270.88890 * 13 10 9 30 30 H 1.09002 * 113.69093 * 139.99483 * 13 10 9 31 31 H 1.07996 * 120.00036 * 180.02562 * 14 4 3 32 32 H 1.08002 * 119.92731 * 179.97438 * 15 14 4 33 33 H 1.08004 * 119.92406 * 179.97438 * 16 15 14 34 34 H 1.09001 * 109.46630 * 225.01843 * 18 17 16 35 35 H 0.96703 * 113.99772 * 299.99971 * 19 18 17 36 36 H 1.48505 * 109.99762 * 180.02562 * 20 18 17 37 37 H 1.48495 * 110.00107 * 301.31954 * 20 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 2.3629 1.8330 1.2042 5 8 2.0501 1.2326 2.3837 6 6 2.4047 1.9288 3.5801 7 6 1.9771 1.1042 4.7959 8 1 0.9781 0.6813 4.6902 9 6 3.0346 0.0849 5.2517 10 6 2.6638 0.4639 6.6951 11 1 1.8530 -0.1352 7.1095 12 8 3.7900 0.5565 7.5699 13 6 2.2039 1.8211 6.1373 14 6 2.9971 3.0650 1.1989 15 6 3.3144 3.6739 -0.0009 16 6 2.9998 3.0567 -1.1973 17 6 2.3675 1.8274 -1.1992 18 6 2.0266 1.1573 -2.5053 19 8 2.9371 0.0813 -2.7404 20 14 2.1571 2.3955 -3.8910 21 1 -0.3634 -1.0277 0.0005 22 1 -0.3634 0.5137 0.8900 23 1 -0.3634 0.5138 -0.8900 24 1 3.4838 2.0806 3.6059 25 1 1.9012 2.8953 3.6010 26 1 2.7880 -0.9450 4.9936 27 1 4.0528 0.3592 4.9760 28 1 4.0839 -0.2939 7.9241 29 1 2.9951 2.5702 6.1037 30 1 1.2870 2.1942 6.5935 31 1 3.2443 3.5491 2.1321 32 1 3.8083 4.6344 -0.0037 33 1 3.2490 3.5358 -2.1326 34 1 1.0092 0.7688 -2.4596 35 1 3.8633 0.3542 -2.7929 36 1 1.8228 1.7471 -5.1846 37 1 1.2381 3.5350 -3.6422 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_204903_11354860.mol2 37 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:30:17 Heat of formation + Delta-G solvation = -97.479926 kcal Electronic energy + Delta-G solvation = -20658.981850 eV Core-core repulsion = 17369.925278 eV Total energy + Delta-G solvation = -3289.056572 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 267.124 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -41.76568 -40.52913 -39.21050 -38.33438 -37.25872 -36.02860 -32.24462 -31.24053 -29.18100 -28.10046 -26.77345 -26.59366 -23.89395 -23.48159 -22.10820 -20.65295 -19.37979 -18.68280 -18.32337 -18.03608 -17.41065 -17.17267 -16.59295 -16.23732 -16.20105 -15.73944 -15.71399 -15.44503 -14.89379 -14.56209 -14.39620 -14.15065 -13.50481 -13.46347 -13.25449 -13.08549 -12.75738 -12.58699 -12.35583 -12.33112 -12.10131 -11.79481 -11.73243 -11.25735 -11.14448 -10.78305 -10.41162 -9.88540 -9.22577 -5.02327 0.01652 0.23547 1.25484 1.64239 1.90869 2.06171 2.37887 2.83446 3.25013 3.41407 3.46377 3.53015 3.65812 3.76013 3.86451 3.92463 4.03483 4.14347 4.19668 4.20821 4.24329 4.30720 4.35581 4.36897 4.43654 4.59435 4.65090 4.71356 4.73886 4.75793 4.94228 5.08164 5.15156 5.19884 5.32700 5.34463 5.59560 6.09703 6.56954 6.75933 6.83659 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.033 3.967 2 O -0.342 6.342 3 C 0.054 3.946 4 C 0.094 3.906 5 O -0.323 6.323 6 C 0.066 3.934 7 C -0.106 4.106 8 H 0.104 0.896 9 C -0.164 4.164 10 C 0.075 3.925 11 H 0.098 0.902 12 O -0.580 6.580 13 C -0.117 4.117 14 C -0.197 4.197 15 C -0.073 4.073 16 C -0.139 4.139 17 C -0.112 4.112 18 C -0.079 4.079 19 O -0.552 6.552 20 Si 0.796 3.204 21 H 0.104 0.896 22 H 0.046 0.954 23 H 0.046 0.954 24 H 0.070 0.930 25 H 0.078 0.922 26 H 0.070 0.930 27 H 0.083 0.917 28 H 0.395 0.605 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.152 0.848 32 H 0.167 0.833 33 H 0.164 0.836 34 H 0.091 0.909 35 H 0.393 0.607 36 H -0.297 1.297 37 H -0.279 1.279 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.545 4.070 1.171 4.508 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 O -0.259 6.259 3 C 0.010 3.990 4 C 0.048 3.952 5 O -0.237 6.237 6 C -0.008 4.008 7 C -0.124 4.124 8 H 0.122 0.878 9 C -0.202 4.202 10 C 0.016 3.984 11 H 0.115 0.885 12 O -0.389 6.389 13 C -0.155 4.155 14 C -0.216 4.216 15 C -0.091 4.091 16 C -0.156 4.156 17 C -0.113 4.113 18 C -0.187 4.187 19 O -0.360 6.360 20 Si 0.699 3.301 21 H 0.123 0.877 22 H 0.065 0.935 23 H 0.064 0.936 24 H 0.089 0.911 25 H 0.096 0.904 26 H 0.089 0.911 27 H 0.101 0.899 28 H 0.245 0.755 29 H 0.109 0.891 30 H 0.109 0.891 31 H 0.170 0.830 32 H 0.185 0.815 33 H 0.181 0.819 34 H 0.109 0.891 35 H 0.243 0.757 36 H -0.225 1.225 37 H -0.206 1.206 Dipole moment (debyes) X Y Z Total from point charges 0.501 4.389 0.476 4.444 hybrid contribution -0.614 -1.000 0.751 1.393 sum -0.112 3.389 1.227 3.607 Atomic orbital electron populations 1.23078 0.78529 1.04084 1.00400 1.86097 1.20585 1.24936 1.94235 1.18147 1.02569 0.88103 0.90206 1.19681 0.97282 0.92698 0.85519 1.86134 1.77571 1.47435 1.12517 1.23001 1.00486 0.95867 0.81451 1.22283 1.00568 0.97579 0.91988 0.87829 1.23748 0.99342 0.99868 0.97235 1.23384 0.88900 0.98133 0.87959 0.88457 1.86471 1.49240 1.37302 1.65838 1.23059 1.02488 0.96665 0.93246 1.21551 1.03824 0.94804 1.01408 1.21394 0.96629 1.00591 0.90473 1.21154 1.00646 0.93864 0.99956 1.20678 1.00583 0.95612 0.94411 1.25374 0.95465 0.97502 1.00382 1.86517 1.21261 1.33789 1.94391 0.93633 0.88956 0.74754 0.72722 0.87729 0.93529 0.93562 0.91148 0.90423 0.91100 0.89887 0.75479 0.89098 0.89149 0.83035 0.81514 0.81883 0.89128 0.75705 1.22527 1.20589 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.19 10.91 113.37 1.24 1.42 16 2 O -0.34 -4.06 9.57 -79.62 -0.76 -4.82 16 3 C 0.05 0.47 5.71 22.57 0.13 0.60 16 4 C 0.09 0.62 6.70 22.57 0.15 0.77 16 5 O -0.32 -2.30 9.92 -79.64 -0.79 -3.09 16 6 C 0.07 0.02 4.58 71.98 0.33 0.35 16 7 C -0.11 0.08 4.01 -10.27 -0.04 0.04 16 8 H 0.10 -0.05 8.14 -2.39 -0.02 -0.07 16 9 C -0.16 -0.03 7.46 31.12 0.23 0.20 16 10 C 0.08 -0.08 5.21 31.12 0.16 0.08 16 11 H 0.10 -0.38 8.14 -2.39 -0.02 -0.40 16 12 O -0.58 -0.78 13.67 -148.98 -2.04 -2.82 16 13 C -0.12 0.23 7.47 31.12 0.23 0.46 16 14 C -0.20 -0.12 9.04 22.35 0.20 0.09 16 15 C -0.07 0.22 10.04 22.27 0.22 0.44 16 16 C -0.14 0.27 8.66 22.27 0.19 0.46 16 17 C -0.11 -0.43 5.27 -19.78 -0.10 -0.54 16 18 C -0.08 -0.27 2.37 71.24 0.17 -0.10 16 19 O -0.55 -2.78 12.88 -148.98 -1.92 -4.70 16 20 Si 0.80 -1.35 29.92 68.60 2.05 0.71 16 21 H 0.10 0.28 8.14 -2.39 -0.02 0.26 16 22 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 23 H 0.05 0.18 7.11 -2.38 -0.02 0.16 16 24 H 0.07 -0.06 7.36 -2.38 -0.02 -0.08 16 25 H 0.08 -0.20 7.66 -2.39 -0.02 -0.22 16 26 H 0.07 0.05 8.14 -2.38 -0.02 0.03 16 27 H 0.08 0.15 7.89 -2.39 -0.02 0.13 16 28 H 0.40 -2.54 9.12 -74.06 -0.68 -3.21 16 29 H 0.09 -0.11 8.10 -2.38 -0.02 -0.13 16 30 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 31 H 0.15 -0.57 6.30 -2.91 -0.02 -0.59 16 32 H 0.17 -1.60 8.06 -2.91 -0.02 -1.63 16 33 H 0.16 -1.39 5.12 -2.91 -0.01 -1.41 16 34 H 0.09 0.56 6.57 -2.39 -0.02 0.54 16 35 H 0.39 -1.54 8.70 -74.06 -0.64 -2.18 16 36 H -0.30 -1.69 7.11 99.48 0.71 -0.98 16 37 H -0.28 -0.62 7.11 99.48 0.71 0.09 16 Total: 0.00 -19.77 308.46 -0.53 -20.29 By element: Atomic # 1 Polarization: -9.67 SS G_CDS: -0.19 Total: -9.85 kcal Atomic # 6 Polarization: 1.17 SS G_CDS: 3.12 Total: 4.28 kcal Atomic # 8 Polarization: -9.92 SS G_CDS: -5.51 Total: -15.43 kcal Atomic # 14 Polarization: -1.35 SS G_CDS: 2.05 Total: 0.71 kcal Total: -19.77 -0.53 -20.29 kcal The number of atoms in the molecule is 37 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_204903_11354860.mol2 37 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.186 kcal (2) G-P(sol) polarization free energy of solvation -19.768 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.526 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.294 kcal (6) G-S(sol) free energy of system = (1) + (5) -97.480 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds