Wall clock time and date at job start Mon Mar 8 2021 08:18:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.36010 * 116.99714 * 2 1 4 4 C 1.39150 * 120.06467 * 180.02562 * 3 2 1 5 5 O 1.35993 * 120.06510 * 359.97438 * 4 3 2 6 6 C 1.42903 * 116.99832 * 180.02562 * 5 4 3 7 7 C 1.52995 * 109.47145 * 180.02562 * 6 5 4 8 8 H 1.08996 * 109.47246 * 305.00097 * 7 6 5 9 9 C 1.53004 * 109.47110 * 65.00063 * 7 6 5 10 10 C 1.53001 * 109.47199 * 180.02562 * 9 7 6 11 11 C 1.53008 * 109.46797 * 299.99753 * 10 9 7 12 12 H 1.08996 * 109.47204 * 300.00252 * 11 10 9 13 13 O 1.42903 * 109.46920 * 180.02562 * 11 10 9 14 14 C 1.53004 * 109.47044 * 60.00152 * 11 10 9 15 15 C 1.52995 * 109.47191 * 185.00038 * 7 6 5 16 16 C 1.38563 * 119.86638 * 179.97438 * 4 3 2 17 17 C 1.38316 * 119.98658 * 359.97438 * 16 4 3 18 18 Br 1.89105 * 119.93558 * 179.97438 * 17 16 4 19 19 C 1.38339 * 120.13079 * 359.97438 * 17 16 4 20 20 C 1.50699 * 119.93281 * 180.02562 * 19 17 16 21 21 O 1.42903 * 109.47455 * 75.15112 * 20 19 17 22 22 Si 1.86301 * 109.46956 * 195.15394 * 20 19 17 23 23 C 1.38240 * 120.13342 * 359.78740 * 19 17 16 24 24 H 1.09002 * 109.47460 * 60.00300 * 1 2 3 25 25 H 1.09009 * 109.46607 * 179.97438 * 1 2 3 26 26 H 1.09000 * 109.47334 * 299.99603 * 1 2 3 27 27 H 1.09005 * 109.47086 * 300.00386 * 6 5 4 28 28 H 1.09002 * 109.47224 * 60.00331 * 6 5 4 29 29 H 1.09004 * 109.47260 * 299.99872 * 9 7 6 30 30 H 1.08996 * 109.47039 * 59.99907 * 9 7 6 31 31 H 1.08997 * 109.47463 * 180.02562 * 10 9 7 32 32 H 1.09003 * 109.47291 * 59.99493 * 10 9 7 33 33 H 0.96696 * 114.00192 * 60.00154 * 13 11 10 34 34 H 1.08999 * 109.47124 * 179.97438 * 14 11 10 35 35 H 1.08996 * 109.47039 * 59.99998 * 14 11 10 36 36 H 1.09004 * 109.47305 * 299.99550 * 15 7 6 37 37 H 1.08997 * 109.47311 * 60.00069 * 15 7 6 38 38 H 1.07996 * 120.00442 * 179.97438 * 16 4 3 39 39 H 1.09002 * 109.46941 * 315.15353 * 20 19 17 40 40 H 0.96692 * 113.99715 * 60.00213 * 21 20 19 41 41 H 1.48501 * 109.99990 * 65.27079 * 22 20 19 42 42 H 1.48500 * 109.99951 * 186.59099 * 22 20 19 43 43 H 1.07995 * 119.99636 * 180.23547 * 23 19 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2119 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1793 0.1475 -0.0005 6 6 5.6001 0.3002 -0.0005 7 6 6.2613 -1.0795 -0.0012 8 1 5.8868 -1.6622 0.8403 9 6 5.9319 -1.8023 -1.3089 10 6 6.5926 -3.1823 -1.3093 11 6 8.1090 -3.0217 -1.1833 12 1 8.4838 -2.4391 -2.0248 13 8 8.7262 -4.3106 -1.1843 14 6 8.4384 -2.2989 0.1244 15 6 7.7776 -0.9184 0.1245 16 6 4.0607 2.5232 -0.0011 17 6 3.3030 3.6803 -0.0016 18 35 4.1571 5.3675 -0.0016 19 6 1.9216 3.6059 -0.0021 20 6 1.1005 4.8696 -0.0033 21 8 1.1310 5.4563 -1.3060 22 14 -0.6597 4.4667 0.4554 23 6 1.2930 2.3747 -0.0066 24 1 -0.3634 0.5138 -0.8900 25 1 -0.3633 -1.0278 -0.0005 26 1 -0.3634 0.5138 0.8900 27 1 5.9064 0.8500 -0.8905 28 1 5.9065 0.8499 0.8895 29 1 4.8516 -1.9170 -1.3985 30 1 6.3064 -1.2195 -2.1504 31 1 6.3583 -3.6970 -2.2410 32 1 6.2178 -3.7648 -0.4677 33 1 8.5594 -4.8259 -1.9853 34 1 9.5187 -2.1849 0.2144 35 1 8.0636 -2.8814 0.9659 36 1 8.1521 -0.3357 -0.7171 37 1 8.0123 -0.4035 1.0561 38 1 5.1389 2.5835 -0.0011 39 1 1.5132 5.5717 0.7211 40 1 0.7780 4.8861 -2.0025 41 1 -0.7198 3.9744 1.8551 42 1 -1.5127 5.6728 0.3040 43 1 0.2145 2.3192 -0.0108 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_2162984_16737256.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 08:18:11 Heat of formation + Delta-G solvation = -134.792904 kcal Electronic energy + Delta-G solvation = -26321.987797 eV Core-core repulsion = 22380.419972 eV Total energy + Delta-G solvation = -3941.567825 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 373.066 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -41.90379 -40.43956 -39.37700 -39.03024 -37.16842 -36.60407 -32.96838 -32.51725 -31.88634 -31.49583 -30.10644 -28.51798 -27.02711 -25.97200 -23.85270 -23.63964 -22.64577 -22.04893 -20.94636 -19.70215 -18.60093 -18.21677 -18.02016 -17.45997 -17.32360 -16.71994 -16.32649 -16.22554 -15.94667 -15.89918 -15.58221 -15.51679 -14.83422 -14.74727 -14.34951 -14.31580 -13.89398 -13.85774 -13.56972 -13.34015 -13.26838 -12.87186 -12.78624 -12.57229 -12.53576 -12.22651 -12.19578 -12.08603 -12.03868 -11.66943 -11.64647 -11.22457 -11.15325 -11.05583 -10.74012 -10.50055 -9.91153 -8.92260 -5.15505 -0.07867 -0.00173 0.64239 1.17736 1.55607 1.90563 1.97132 2.10982 2.30208 3.12936 3.33954 3.42408 3.53255 3.56331 3.66001 3.71823 3.86738 3.92557 4.00760 4.05480 4.12844 4.13179 4.19295 4.26354 4.27317 4.28061 4.35650 4.39808 4.42239 4.48920 4.53251 4.64518 4.72292 4.73941 4.89421 4.99399 5.01773 5.03900 5.10202 5.10662 5.22560 5.29823 5.36964 5.90341 6.38706 6.53151 6.69278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.299 6.299 3 C 0.123 3.877 4 C 0.117 3.883 5 O -0.294 6.294 6 C 0.059 3.941 7 C -0.086 4.086 8 H 0.086 0.914 9 C -0.111 4.111 10 C -0.152 4.152 11 C 0.103 3.897 12 H 0.055 0.945 13 O -0.569 6.569 14 C -0.111 4.111 15 C -0.110 4.110 16 C -0.148 4.148 17 C -0.066 4.066 18 Br -0.032 7.032 19 C -0.090 4.090 20 C -0.068 4.068 21 O -0.526 6.526 22 Si 0.673 3.327 23 C -0.164 4.164 24 H 0.062 0.938 25 H 0.106 0.894 26 H 0.058 0.942 27 H 0.066 0.934 28 H 0.066 0.934 29 H 0.076 0.924 30 H 0.063 0.937 31 H 0.066 0.934 32 H 0.072 0.928 33 H 0.379 0.621 34 H 0.073 0.927 35 H 0.072 0.928 36 H 0.069 0.931 37 H 0.074 0.926 38 H 0.147 0.853 39 H 0.120 0.880 40 H 0.377 0.623 41 H -0.252 1.252 42 H -0.247 1.247 43 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.241 -2.501 -2.168 3.997 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.211 6.211 3 C 0.076 3.924 4 C 0.070 3.930 5 O -0.207 6.207 6 C -0.017 4.017 7 C -0.105 4.105 8 H 0.104 0.896 9 C -0.149 4.149 10 C -0.190 4.190 11 C 0.044 3.956 12 H 0.073 0.927 13 O -0.375 6.375 14 C -0.149 4.149 15 C -0.148 4.148 16 C -0.169 4.169 17 C -0.146 4.146 18 Br 0.054 6.946 19 C -0.092 4.092 20 C -0.179 4.179 21 O -0.331 6.331 22 Si 0.573 3.427 23 C -0.183 4.183 24 H 0.080 0.920 25 H 0.125 0.875 26 H 0.077 0.923 27 H 0.084 0.916 28 H 0.084 0.916 29 H 0.095 0.905 30 H 0.082 0.918 31 H 0.085 0.915 32 H 0.091 0.909 33 H 0.226 0.774 34 H 0.092 0.908 35 H 0.091 0.909 36 H 0.088 0.912 37 H 0.093 0.907 38 H 0.164 0.836 39 H 0.137 0.863 40 H 0.224 0.776 41 H -0.176 1.176 42 H -0.171 1.171 43 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -2.103 -1.386 -0.704 2.615 hybrid contribution 0.116 0.003 -0.396 0.412 sum -1.987 -1.383 -1.099 2.659 Atomic orbital electron populations 1.23241 0.77843 1.04875 1.01694 1.86236 1.21589 1.25061 1.88263 1.18213 0.89095 0.85339 0.99773 1.18087 0.88252 0.85890 1.00808 1.86196 1.18765 1.27397 1.88377 1.23001 0.77992 0.98919 1.01739 1.21212 0.94915 0.94309 1.00026 0.89570 1.21514 1.01543 0.95242 0.96564 1.22278 0.95934 0.97941 1.02810 1.21852 0.91402 0.84305 0.98056 0.92737 1.86516 1.76079 1.29460 1.45470 1.21445 1.01315 0.95035 0.97076 1.21490 0.93206 0.97141 1.02950 1.21037 1.00755 0.89732 1.05337 1.21317 0.93790 0.91905 1.07594 1.96775 1.78568 1.21824 1.97455 1.19923 0.92631 0.95336 1.01351 1.25113 1.08945 0.93943 0.89945 1.86588 1.86860 1.44002 1.15652 0.95313 0.76648 0.85765 0.84947 1.20802 0.99447 0.90549 1.07486 0.91986 0.87549 0.92309 0.91616 0.91605 0.90538 0.91781 0.91514 0.90916 0.77380 0.90821 0.90920 0.91219 0.90736 0.83573 0.86277 0.77645 1.17643 1.17096 0.83500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 101.05 0.99 0.94 16 2 O -0.30 -0.34 10.28 -34.29 -0.35 -0.69 16 3 C 0.12 0.14 6.70 -39.12 -0.26 -0.12 16 4 C 0.12 0.19 6.70 -39.12 -0.26 -0.07 16 5 O -0.29 -0.48 9.46 -34.24 -0.32 -0.81 16 6 C 0.06 -0.05 4.12 37.16 0.15 0.10 16 7 C -0.09 0.10 2.43 -90.62 -0.22 -0.12 16 8 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 9 C -0.11 0.10 5.10 -26.73 -0.14 -0.03 16 10 C -0.15 0.13 5.55 -26.73 -0.15 -0.02 16 11 C 0.10 -0.03 3.47 -26.72 -0.09 -0.12 16 12 H 0.05 -0.05 8.14 -51.93 -0.42 -0.47 16 13 O -0.57 -0.59 13.32 -35.23 -0.47 -1.06 16 14 C -0.11 0.05 5.58 -26.70 -0.15 -0.10 16 15 C -0.11 0.21 5.21 -26.71 -0.14 0.07 16 16 C -0.15 -0.14 8.77 -39.43 -0.35 -0.49 16 17 C -0.07 -0.10 6.22 -39.52 -0.25 -0.35 16 18 Br -0.03 -0.07 31.96 -68.01 -2.17 -2.24 16 19 C -0.09 -0.05 5.26 -104.58 -0.55 -0.60 16 20 C -0.07 -0.01 2.02 36.01 0.07 0.06 16 21 O -0.53 -0.16 12.70 -35.23 -0.45 -0.60 16 22 Si 0.67 -0.83 29.92 -169.99 -5.09 -5.91 16 23 C -0.16 0.09 7.64 -39.46 -0.30 -0.22 16 24 H 0.06 -0.29 7.65 -51.93 -0.40 -0.69 16 25 H 0.11 -0.45 8.14 -51.92 -0.42 -0.87 16 26 H 0.06 -0.23 7.68 -51.93 -0.40 -0.63 16 27 H 0.07 -0.12 7.66 -51.93 -0.40 -0.51 16 28 H 0.07 -0.11 7.66 -51.93 -0.40 -0.51 16 29 H 0.08 0.02 7.82 -51.93 -0.41 -0.39 16 30 H 0.06 -0.08 8.14 -51.93 -0.42 -0.50 16 31 H 0.07 -0.10 8.14 -51.93 -0.42 -0.53 16 32 H 0.07 0.01 8.14 -51.93 -0.42 -0.42 16 33 H 0.38 -1.06 9.08 45.56 0.41 -0.65 16 34 H 0.07 -0.01 8.14 -51.93 -0.42 -0.43 16 35 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 36 H 0.07 -0.17 8.14 -51.93 -0.42 -0.59 16 37 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 38 H 0.15 -0.08 6.30 -52.49 -0.33 -0.41 16 39 H 0.12 0.15 7.21 -51.93 -0.37 -0.22 16 40 H 0.38 -1.36 8.70 45.56 0.40 -0.97 16 41 H -0.25 -0.30 7.11 56.52 0.40 0.11 16 42 H -0.25 -0.46 7.11 56.52 0.40 -0.05 16 43 H 0.15 -0.49 3.37 -52.49 -0.18 -0.66 16 LS Contribution 360.97 15.07 5.44 5.44 Total: 0.00 -7.24 360.97 -10.54 -17.78 By element: Atomic # 1 Polarization: -5.35 SS G_CDS: -5.49 Total: -10.85 kcal Atomic # 6 Polarization: 0.57 SS G_CDS: -1.64 Total: -1.06 kcal Atomic # 8 Polarization: -1.57 SS G_CDS: -1.59 Total: -3.16 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.09 Total: -5.91 kcal Atomic # 35 Polarization: -0.07 SS G_CDS: -2.17 Total: -2.24 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -7.24 -10.54 -17.78 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_2162984_16737256.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -117.012 kcal (2) G-P(sol) polarization free energy of solvation -7.239 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -124.251 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.542 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.781 kcal (6) G-S(sol) free energy of system = (1) + (5) -134.793 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds