Wall clock time and date at job start Mon Mar 8 2021 10:42:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 O 1.42901 * 109.46975 * 2 1 4 4 C 1.35992 * 116.99992 * 179.97438 * 3 2 1 5 5 C 1.38524 * 120.07350 * 0.02562 * 4 3 2 6 6 C 1.38277 * 120.00086 * 179.97438 * 5 4 3 7 7 C 1.50705 * 119.92618 * 179.97438 * 6 5 4 8 8 O 1.42901 * 109.47403 * 300.00388 * 7 6 5 9 9 Si 1.86305 * 109.47122 * 180.02562 * 7 6 5 10 10 H 1.48497 * 109.47210 * 60.00144 * 9 7 6 11 11 H 1.48498 * 109.47257 * 179.97438 * 9 7 6 12 12 H 1.48505 * 109.47095 * 300.00084 * 9 7 6 13 13 C 1.38212 * 120.15109 * 359.97438 * 6 5 4 14 14 C 1.38284 * 120.14245 * 359.76267 * 13 6 5 15 15 C 1.38530 * 120.00071 * 0.51023 * 14 13 6 16 16 O 1.35983 * 120.07711 * 179.74253 * 15 14 13 17 17 C 1.42906 * 117.00105 * 359.72808 * 16 15 14 18 18 C 1.50693 * 109.47463 * 180.02562 * 17 16 15 19 19 C 1.38233 * 120.00207 * 89.99418 * 18 17 16 20 20 C 1.38234 * 120.00037 * 179.72405 * 19 18 17 21 21 C 1.38234 * 120.00240 * 0.26327 * 20 19 18 22 22 Si 1.86795 * 120.00205 * 180.02562 * 21 20 19 23 23 C 1.86297 * 109.47192 * 89.99958 * 22 21 20 24 24 C 1.86301 * 109.47283 * 209.99980 * 22 21 20 25 25 C 1.86301 * 109.47118 * 329.99845 * 22 21 20 26 26 C 1.38238 * 119.99693 * 359.97438 * 21 20 19 27 27 C 1.38234 * 120.00067 * 0.02562 * 26 21 20 28 28 H 1.08995 * 109.47055 * 179.97438 * 1 2 3 29 29 H 1.09008 * 109.47399 * 299.99942 * 1 2 3 30 30 H 1.09003 * 109.47436 * 59.99583 * 1 2 3 31 31 H 1.08999 * 109.47227 * 240.00207 * 2 1 3 32 32 H 1.09002 * 109.47110 * 119.99982 * 2 1 3 33 33 H 1.08006 * 119.99637 * 359.95373 * 5 4 3 34 34 H 1.08998 * 109.46911 * 60.00438 * 7 6 5 35 35 H 0.96707 * 113.99280 * 300.00264 * 8 7 6 36 36 H 1.07996 * 119.93341 * 180.02562 * 13 6 5 37 37 H 1.08004 * 120.00587 * 180.25509 * 14 13 6 38 38 H 1.09000 * 109.46902 * 59.99959 * 17 16 15 39 39 H 1.09001 * 109.46622 * 299.99855 * 17 16 15 40 40 H 1.08002 * 120.00157 * 0.02562 * 19 18 17 41 41 H 1.07999 * 120.00009 * 180.28389 * 20 19 18 42 42 H 1.08999 * 109.47282 * 60.00138 * 23 22 21 43 43 H 1.08997 * 109.47709 * 179.97438 * 23 22 21 44 44 H 1.09001 * 109.47505 * 300.00288 * 23 22 21 45 45 H 1.08998 * 109.47270 * 60.00089 * 24 22 21 46 46 H 1.08997 * 109.47416 * 180.02562 * 24 22 21 47 47 H 1.09006 * 109.46995 * 300.00168 * 24 22 21 48 48 H 1.09002 * 109.46976 * 60.00696 * 25 22 21 49 49 H 1.09005 * 109.47230 * 179.97438 * 25 22 21 50 50 H 1.08998 * 109.47233 * 299.99787 * 25 22 21 51 51 H 1.08001 * 119.99624 * 180.02562 * 26 21 20 52 52 H 1.07999 * 120.00008 * 180.02562 * 27 26 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 8 2.0063 1.3473 0.0000 4 6 3.3545 1.5255 0.0005 5 6 4.1998 0.4280 0.0005 6 6 5.5704 0.6110 0.0005 7 6 6.4884 -0.5842 0.0011 8 8 6.2443 -1.3719 1.1681 9 14 8.2597 -0.0067 0.0018 10 1 8.5128 0.8125 1.2142 11 1 9.1643 -1.1843 0.0030 12 1 8.5138 0.8122 -1.2108 13 6 6.1004 1.8875 0.0000 14 6 5.2622 2.9873 -0.0054 15 6 3.8882 2.8111 0.0003 16 8 3.0625 3.8916 0.0002 17 6 3.6803 5.1803 0.0001 18 6 2.6165 6.2475 0.0006 19 6 2.1288 6.7368 1.1980 20 6 1.1570 7.7198 1.1985 21 6 0.6688 8.2098 0.0016 22 14 -0.6439 9.5387 0.0022 23 6 0.1692 11.2148 -0.0019 24 6 -1.7082 9.3610 -1.5165 25 6 -1.7021 9.3655 1.5258 26 6 1.1529 7.7170 -1.1958 27 6 2.1248 6.7339 -1.1963 28 1 -0.3633 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 1.8933 -0.5138 -0.8900 32 1 1.8933 -0.5138 0.8900 33 1 3.7882 -0.5705 0.0008 34 1 6.3023 -1.1856 -0.8887 35 1 6.3904 -0.8993 1.9992 36 1 7.1714 2.0263 -0.0004 37 1 5.6787 3.9838 -0.0100 38 1 4.3008 5.2856 -0.8899 39 1 4.3007 5.2857 0.8901 40 1 2.5106 6.3545 2.1332 41 1 0.7793 8.1053 2.1340 42 1 0.7883 11.3161 -0.8933 43 1 -0.5967 11.9903 -0.0020 44 1 0.7919 11.3188 0.8866 45 1 -2.1840 8.3803 -1.5141 46 1 -2.4740 10.1367 -1.5163 47 1 -1.0891 9.4623 -2.4079 48 1 -1.0794 9.4696 2.4143 49 1 -2.4679 10.1413 1.5264 50 1 -2.1779 8.3849 1.5282 51 1 0.7718 8.1000 -2.1309 52 1 2.5033 6.3492 -2.1318 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_34_34834_9403676.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 10:42:59 Heat of formation + Delta-G solvation = -104.995277 kcal Electronic energy + Delta-G solvation = -29239.186144 eV Core-core repulsion = 25292.525493 eV Total energy + Delta-G solvation = -3946.660651 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 360.172 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -41.66299 -40.26964 -39.22136 -38.83979 -36.94556 -33.33783 -32.63406 -31.85805 -31.57370 -30.64220 -29.57493 -28.43784 -28.41404 -27.62313 -26.16357 -24.89235 -23.45599 -22.92268 -22.50515 -21.73510 -19.62537 -18.51571 -18.19348 -17.69535 -17.26998 -16.87934 -16.71342 -16.16545 -16.00951 -15.93501 -15.89128 -15.44690 -15.10104 -14.75407 -14.34783 -14.28203 -14.16645 -14.11606 -14.07655 -13.83937 -13.80856 -13.60663 -13.50258 -13.40549 -13.25786 -13.23906 -13.09961 -12.94767 -12.81476 -12.38589 -12.33787 -12.16005 -12.10917 -12.02198 -11.76707 -11.65557 -11.56047 -11.03572 -10.90129 -10.81739 -10.44830 -9.75255 -9.70954 -9.66206 -8.77128 0.20004 0.24863 0.35186 0.57600 1.14087 1.42386 1.50097 1.71189 1.85335 1.89543 1.90077 2.24903 2.30729 2.54989 2.63736 3.06064 3.43365 3.61628 3.72611 3.82136 3.88496 3.91787 4.01833 4.08826 4.11086 4.23369 4.24802 4.30453 4.33767 4.40804 4.53067 4.55859 4.64281 4.68556 4.70429 4.71987 4.75441 4.76212 4.76616 4.77088 4.78334 4.89857 5.03063 5.04460 5.17643 5.17916 5.18694 5.41029 5.42363 5.47227 5.51081 5.53650 5.63722 5.64095 5.65458 6.12509 6.14867 6.52935 6.63947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.152 4.152 2 C 0.053 3.947 3 O -0.303 6.303 4 C 0.105 3.895 5 C -0.145 4.145 6 C -0.118 4.118 7 C -0.077 4.077 8 O -0.539 6.539 9 Si 0.951 3.049 10 H -0.251 1.251 11 H -0.254 1.254 12 H -0.250 1.250 13 C -0.122 4.122 14 C -0.169 4.169 15 C 0.107 3.893 16 O -0.295 6.295 17 C 0.098 3.902 18 C -0.087 4.087 19 C -0.106 4.106 20 C -0.092 4.092 21 C -0.361 4.361 22 Si 1.060 2.940 23 C -0.449 4.449 24 C -0.450 4.450 25 C -0.450 4.450 26 C -0.092 4.092 27 C -0.105 4.105 28 H 0.079 0.921 29 H 0.067 0.933 30 H 0.066 0.934 31 H 0.062 0.938 32 H 0.063 0.937 33 H 0.141 0.859 34 H 0.118 0.882 35 H 0.377 0.623 36 H 0.124 0.876 37 H 0.138 0.862 38 H 0.071 0.929 39 H 0.071 0.929 40 H 0.120 0.880 41 H 0.123 0.877 42 H 0.069 0.931 43 H 0.071 0.929 44 H 0.069 0.931 45 H 0.071 0.929 46 H 0.071 0.929 47 H 0.069 0.931 48 H 0.069 0.931 49 H 0.071 0.929 50 H 0.071 0.929 51 H 0.123 0.877 52 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.060 1.474 0.088 1.478 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.209 4.209 2 C -0.022 4.022 3 O -0.217 6.217 4 C 0.059 3.941 5 C -0.164 4.164 6 C -0.119 4.119 7 C -0.188 4.188 8 O -0.344 6.344 9 Si 0.774 3.226 10 H -0.175 1.175 11 H -0.178 1.178 12 H -0.174 1.174 13 C -0.140 4.140 14 C -0.188 4.188 15 C 0.062 3.938 16 O -0.209 6.209 17 C 0.024 3.976 18 C -0.087 4.087 19 C -0.124 4.124 20 C -0.110 4.110 21 C -0.403 4.403 22 Si 1.251 2.749 23 C -0.556 4.556 24 C -0.557 4.557 25 C -0.557 4.557 26 C -0.110 4.110 27 C -0.124 4.124 28 H 0.098 0.902 29 H 0.086 0.914 30 H 0.085 0.915 31 H 0.080 0.920 32 H 0.081 0.919 33 H 0.158 0.842 34 H 0.136 0.864 35 H 0.224 0.776 36 H 0.142 0.858 37 H 0.156 0.844 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.138 0.862 41 H 0.141 0.859 42 H 0.088 0.912 43 H 0.090 0.910 44 H 0.088 0.912 45 H 0.090 0.910 46 H 0.090 0.910 47 H 0.088 0.912 48 H 0.088 0.912 49 H 0.090 0.910 50 H 0.090 0.910 51 H 0.141 0.859 52 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges 0.459 1.406 -0.361 1.523 hybrid contribution 0.129 0.005 0.341 0.364 sum 0.588 1.411 -0.021 1.529 Atomic orbital electron populations 1.21768 0.92478 1.02957 1.03694 1.22840 0.96179 0.81789 1.01440 1.86206 1.17696 1.29152 1.88662 1.18250 0.83467 0.90962 1.01408 1.20905 0.92900 0.97794 1.04782 1.19982 0.94221 0.94609 1.03073 1.24946 1.08051 0.93910 0.91894 1.86506 1.92285 1.40291 1.15350 0.85660 0.75110 0.80010 0.81791 1.17474 1.17848 1.17426 1.20714 0.99388 0.91726 1.02157 1.20996 0.91070 1.00199 1.06540 1.18280 0.88996 0.85391 1.01172 1.86284 1.33757 1.12257 1.88598 1.21657 0.93966 0.79885 1.02119 1.19437 0.98439 0.96749 0.94048 1.21140 0.96998 0.97024 0.97203 1.21070 0.95810 0.95893 0.98216 1.27469 1.09169 1.09475 0.94172 0.78181 0.64694 0.64644 0.67348 1.26121 1.07613 1.17278 1.04611 1.26136 1.09762 1.04850 1.15002 1.26136 1.09702 1.04842 1.15068 1.21071 0.95822 0.95881 0.98212 1.21142 0.96975 0.97024 0.97221 0.90216 0.91435 0.91453 0.91990 0.91888 0.84172 0.86449 0.77612 0.85803 0.84436 0.91073 0.91088 0.86164 0.85921 0.91174 0.91021 0.91170 0.91020 0.90950 0.91177 0.91177 0.90950 0.91019 0.85921 0.86160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.15 0.03 10.28 37.16 0.38 0.41 16 2 C 0.05 0.04 5.46 37.16 0.20 0.25 16 3 O -0.30 -1.26 9.92 -34.19 -0.34 -1.60 16 4 C 0.10 0.38 6.70 -39.12 -0.26 0.12 16 5 C -0.14 -0.28 8.60 -39.46 -0.34 -0.62 16 6 C -0.12 -0.13 5.39 -104.61 -0.56 -0.69 16 7 C -0.08 0.02 2.82 36.01 0.10 0.12 16 8 O -0.54 -0.19 12.77 -35.23 -0.45 -0.64 16 9 Si 0.95 -0.50 25.06 -169.99 -4.26 -4.76 16 10 H -0.25 0.09 7.11 56.52 0.40 0.49 16 11 H -0.25 -0.23 7.11 56.52 0.40 0.17 16 12 H -0.25 0.00 7.11 56.52 0.40 0.40 16 13 C -0.12 -0.11 8.66 -39.57 -0.34 -0.46 16 14 C -0.17 -0.23 9.04 -39.46 -0.36 -0.59 16 15 C 0.11 0.37 6.70 -39.12 -0.26 0.11 16 16 O -0.30 -1.21 9.91 -34.17 -0.34 -1.55 16 17 C 0.10 0.12 4.87 36.00 0.18 0.29 16 18 C -0.09 -0.18 5.51 -104.63 -0.58 -0.76 16 19 C -0.11 -0.18 9.70 -39.58 -0.38 -0.57 16 20 C -0.09 -0.08 9.29 -39.58 -0.37 -0.45 16 21 C -0.36 -0.11 4.59 -39.58 -0.18 -0.29 16 22 Si 1.06 -2.34 12.32 -169.99 -2.09 -4.43 16 23 C -0.45 0.62 8.65 101.05 0.87 1.50 16 24 C -0.45 0.65 8.53 101.05 0.86 1.52 16 25 C -0.45 0.66 8.53 101.05 0.86 1.52 16 26 C -0.09 -0.08 9.29 -39.58 -0.37 -0.45 16 27 C -0.11 -0.18 9.70 -39.58 -0.38 -0.57 16 28 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 29 H 0.07 0.02 8.14 -51.92 -0.42 -0.40 16 30 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 31 H 0.06 -0.01 7.66 -51.93 -0.40 -0.41 16 32 H 0.06 0.00 7.66 -51.93 -0.40 -0.40 16 33 H 0.14 0.10 6.30 -52.48 -0.33 -0.23 16 34 H 0.12 -0.12 7.96 -51.93 -0.41 -0.53 16 35 H 0.38 -1.01 8.70 45.56 0.40 -0.61 16 36 H 0.12 -0.08 4.87 -52.49 -0.26 -0.33 16 37 H 0.14 -0.11 6.30 -52.48 -0.33 -0.44 16 38 H 0.07 -0.02 7.60 -51.93 -0.39 -0.41 16 39 H 0.07 -0.02 7.62 -51.93 -0.40 -0.42 16 40 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 41 H 0.12 -0.13 7.43 -52.49 -0.39 -0.52 16 42 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 43 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 44 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 45 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 46 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 47 H 0.07 -0.12 7.69 -51.93 -0.40 -0.51 16 48 H 0.07 -0.12 7.69 -51.93 -0.40 -0.51 16 49 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 50 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 51 H 0.12 -0.13 7.43 -52.49 -0.39 -0.52 16 52 H 0.12 0.06 8.06 -52.49 -0.42 -0.37 16 LS Contribution 424.80 15.07 6.40 6.40 Total: 0.00 -6.76 424.80 -9.91 -16.67 By element: Atomic # 1 Polarization: -2.57 SS G_CDS: -7.90 Total: -10.47 kcal Atomic # 6 Polarization: 1.31 SS G_CDS: -0.93 Total: 0.38 kcal Atomic # 8 Polarization: -2.67 SS G_CDS: -1.13 Total: -3.80 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: -6.36 Total: -9.19 kcal Total LS contribution 6.40 Total: 6.40 kcal Total: -6.76 -9.91 -16.67 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_34834_9403676.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -88.323 kcal (2) G-P(sol) polarization free energy of solvation -6.761 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.084 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.911 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.673 kcal (6) G-S(sol) free energy of system = (1) + (5) -104.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds