Wall clock time and date at job start Mon Mar 8 2021 09:25:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86296 * 109.47068 * 2 1 4 4 C 1.50702 * 109.46784 * 240.00258 * 2 1 3 5 5 C 1.38245 * 119.93281 * 299.99636 * 4 2 1 6 6 C 1.38376 * 120.07008 * 180.02562 * 5 4 2 7 7 F 1.35107 * 120.03268 * 180.02562 * 6 5 4 8 8 C 1.38832 * 119.93113 * 359.97438 * 6 5 4 9 9 O 1.36008 * 120.06903 * 180.02562 * 8 6 5 10 10 C 1.42898 * 117.00298 * 89.99808 * 9 8 6 11 11 C 1.53002 * 109.47362 * 179.97438 * 10 9 8 12 12 H 1.08996 * 112.84723 * 43.80708 * 11 10 9 13 13 C 1.53781 * 113.61609 * 174.99888 * 11 10 9 14 14 C 1.53781 * 87.08070 * 139.98229 * 13 11 10 15 15 H 1.09002 * 113.61445 * 89.11830 * 14 13 11 16 16 O 1.42905 * 113.61505 * 219.93701 * 14 13 11 17 17 C 1.53786 * 87.17350 * 334.52830 * 14 13 11 18 18 C 1.38833 * 119.86069 * 0.27416 * 8 6 5 19 19 F 1.35093 * 120.03455 * 179.70859 * 18 8 6 20 20 C 1.38259 * 119.92928 * 120.02038 * 4 2 1 21 21 H 0.96694 * 113.99449 * 299.99657 * 1 2 3 22 22 H 1.08997 * 109.47143 * 120.00584 * 2 1 3 23 23 H 1.48499 * 110.00281 * 300.00680 * 3 2 1 24 24 H 1.48505 * 110.00028 * 61.31952 * 3 2 1 25 25 H 1.08007 * 119.96759 * 0.02571 * 5 4 2 26 26 H 1.08997 * 109.47241 * 59.99682 * 10 9 8 27 27 H 1.09006 * 109.47242 * 300.00125 * 10 9 8 28 28 H 1.08999 * 113.61181 * 25.43284 * 13 11 10 29 29 H 1.08998 * 113.61680 * 254.52836 * 13 11 10 30 30 H 0.96696 * 114.00145 * 178.47219 * 16 14 13 31 31 H 1.08992 * 113.61675 * 140.02412 * 17 14 13 32 32 H 1.09000 * 113.60973 * 270.92699 * 17 14 13 33 33 H 1.07995 * 119.96127 * 359.97438 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.5965 -2.0339 -1.4479 6 6 2.0566 -2.6891 -2.5766 7 9 1.7284 -3.9825 -2.7886 8 6 2.8547 -2.0157 -3.4914 9 8 3.3080 -2.6568 -4.6020 10 6 2.4846 -2.5952 -5.7683 11 6 3.1541 -3.3675 -6.9068 12 1 3.5670 -4.3233 -6.5843 13 6 2.2908 -3.4661 -8.1755 14 6 3.5827 -3.2366 -8.9775 15 1 4.1140 -4.1565 -9.2220 16 8 3.4105 -2.3783 -10.1070 17 6 4.1356 -2.5174 -7.7357 18 6 3.1935 -0.6881 -3.2677 19 9 3.9748 -0.0312 -4.1526 20 6 2.7264 -0.0372 -2.1395 21 1 -0.3932 0.4416 0.7651 22 1 1.7924 -0.5139 0.8899 23 1 1.5614 2.4680 -1.2084 24 1 1.5879 2.4585 1.2243 25 1 0.9752 -2.5572 -0.7361 26 1 2.3516 -1.5547 -6.0645 27 1 1.5126 -3.0380 -5.5507 28 1 1.5661 -2.6579 -8.2744 29 1 1.8509 -4.4515 -8.3289 30 1 4.2243 -2.2114 -10.6019 31 1 5.1839 -2.7374 -7.5343 32 1 3.9143 -1.4503 -7.7147 33 1 2.9862 0.9968 -1.9668 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_34_6672274_11354860.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Mon Mar 8 2021 09:25:38 Heat of formation + Delta-G solvation = -147.552677 kcal Electronic energy + Delta-G solvation = -21021.555519 eV Core-core repulsion = 17265.639489 eV Total energy + Delta-G solvation = -3755.916030 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 273.090 amu Computer time = 0.35 seconds Orbital eigenvalues (eV) -50.21930 -50.18439 -41.11604 -40.35977 -39.08361 -37.46035 -36.04543 -32.31709 -31.68428 -29.41309 -26.83442 -26.58069 -24.42156 -23.60858 -22.80350 -20.67991 -19.49452 -19.05742 -18.69760 -18.59781 -18.49031 -17.45463 -17.13995 -16.62040 -16.53736 -16.44406 -16.11036 -15.88451 -15.84024 -15.55368 -14.85280 -14.38202 -14.18641 -13.94140 -13.73472 -13.51735 -13.34230 -13.13968 -12.69400 -12.53557 -12.29568 -12.08151 -11.93900 -11.48104 -11.09254 -10.78428 -10.62232 -10.05846 -9.93902 -4.93607 -0.52659 -0.32278 1.21393 1.58735 1.77002 1.94028 2.24809 2.50800 3.02483 3.19929 3.26815 3.37482 3.50529 3.54686 3.62440 3.75047 3.83445 3.89788 4.09025 4.15060 4.19805 4.29673 4.40794 4.45837 4.49715 4.63192 4.70404 4.72134 4.74819 4.93159 4.94375 5.07365 5.25571 5.35351 6.08467 6.55769 6.84825 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.081 4.081 3 Si 0.755 3.245 4 C -0.021 4.021 5 C -0.119 4.119 6 C 0.101 3.899 7 F -0.129 7.129 8 C 0.019 3.981 9 O -0.330 6.330 10 C 0.073 3.927 11 C -0.105 4.105 12 H 0.110 0.890 13 C -0.121 4.121 14 C 0.077 3.923 15 H 0.102 0.898 16 O -0.581 6.581 17 C -0.161 4.161 18 C 0.108 3.892 19 F -0.126 7.126 20 C -0.142 4.142 21 H 0.402 0.598 22 H 0.117 0.883 23 H -0.297 1.297 24 H -0.277 1.277 25 H 0.165 0.835 26 H 0.058 0.942 27 H 0.062 0.938 28 H 0.084 0.916 29 H 0.091 0.909 30 H 0.396 0.604 31 H 0.078 0.922 32 H 0.080 0.920 33 H 0.169 0.831 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.668 0.785 3.466 3.926 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.365 6.365 2 C -0.189 4.189 3 Si 0.659 3.341 4 C -0.021 4.021 5 C -0.137 4.137 6 C 0.081 3.919 7 F -0.108 7.108 8 C -0.027 4.027 9 O -0.248 6.248 10 C -0.001 4.001 11 C -0.123 4.123 12 H 0.128 0.872 13 C -0.159 4.159 14 C 0.019 3.981 15 H 0.120 0.880 16 O -0.390 6.390 17 C -0.199 4.199 18 C 0.088 3.912 19 F -0.104 7.104 20 C -0.160 4.160 21 H 0.253 0.747 22 H 0.135 0.865 23 H -0.224 1.224 24 H -0.204 1.204 25 H 0.183 0.817 26 H 0.076 0.924 27 H 0.080 0.920 28 H 0.103 0.897 29 H 0.109 0.891 30 H 0.246 0.754 31 H 0.097 0.903 32 H 0.099 0.901 33 H 0.186 0.814 Dipole moment (debyes) X Y Z Total from point charges 1.119 1.169 3.049 3.452 hybrid contribution -0.664 -0.176 -0.036 0.687 sum 0.456 0.993 3.013 3.205 Atomic orbital electron populations 1.86527 1.17635 1.80849 1.51538 1.24933 0.84787 1.11624 0.97586 0.94164 0.90470 0.72218 0.77230 1.19131 0.95030 0.92656 0.95327 1.21194 1.00881 0.95047 0.96615 1.17884 0.97850 0.79700 0.96474 1.91532 1.90686 1.33722 1.94831 1.18766 1.01669 0.91065 0.91226 1.86123 1.47193 1.72992 1.18445 1.22995 0.93569 1.00286 0.83270 1.22347 0.98123 1.00220 0.91618 0.87179 1.23074 0.96751 1.03586 0.92464 1.23383 0.97353 0.93360 0.84043 0.88047 1.86475 1.39406 1.69622 1.43482 1.23778 1.00004 0.99814 0.96321 1.17665 0.94708 0.88813 0.89999 1.91539 1.71608 1.80190 1.67092 1.21165 1.00312 1.01883 0.92662 0.74670 0.86499 1.22440 1.20381 0.81740 0.92418 0.91977 0.89725 0.89084 0.75407 0.90306 0.90149 0.81395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.44 12.74 -148.98 -1.90 -0.46 16 2 C -0.08 0.42 2.81 71.24 0.20 0.62 16 3 Si 0.75 -4.07 29.78 68.60 2.04 -2.03 16 4 C -0.02 0.02 5.42 -19.86 -0.11 -0.09 16 5 C -0.12 -0.10 9.58 22.30 0.21 0.11 16 6 C 0.10 0.51 7.31 22.44 0.16 0.67 16 7 F -0.13 -0.96 17.11 44.97 0.77 -0.19 16 8 C 0.02 0.12 5.74 22.55 0.13 0.25 16 9 O -0.33 -2.69 9.79 -93.64 -0.92 -3.61 16 10 C 0.07 0.31 5.90 71.98 0.42 0.74 16 11 C -0.10 -0.15 4.02 -10.18 -0.04 -0.19 16 12 H 0.11 0.08 8.14 -2.39 -0.02 0.06 16 13 C -0.12 -0.08 7.47 31.12 0.23 0.15 16 14 C 0.08 0.01 5.20 31.12 0.16 0.17 16 15 H 0.10 -0.34 8.14 -2.39 -0.02 -0.36 16 16 O -0.58 -1.52 13.67 -148.98 -2.04 -3.55 16 17 C -0.16 -0.19 7.48 31.21 0.23 0.04 16 18 C 0.11 0.49 7.31 22.44 0.16 0.65 16 19 F -0.13 -0.82 17.11 44.97 0.77 -0.05 16 20 C -0.14 0.01 8.64 22.31 0.19 0.20 16 21 H 0.40 -4.24 8.74 -74.06 -0.65 -4.89 16 22 H 0.12 -1.23 7.96 -2.39 -0.02 -1.25 16 23 H -0.30 -0.71 7.11 99.48 0.71 -0.01 16 24 H -0.28 0.41 7.11 99.48 0.71 1.11 16 25 H 0.17 -0.36 8.06 -2.91 -0.02 -0.39 16 26 H 0.06 0.25 7.85 -2.39 -0.02 0.23 16 27 H 0.06 0.22 8.14 -2.38 -0.02 0.20 16 28 H 0.08 0.20 8.10 -2.39 -0.02 0.18 16 29 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 30 H 0.40 -2.22 9.12 -74.06 -0.68 -2.90 16 31 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 32 H 0.08 0.27 7.90 -2.39 -0.02 0.26 16 33 H 0.17 -0.73 4.87 -2.91 -0.01 -0.75 16 Total: 0.00 -15.77 294.61 0.58 -15.19 By element: Atomic # 1 Polarization: -8.52 SS G_CDS: -0.12 Total: -8.64 kcal Atomic # 6 Polarization: 1.36 SS G_CDS: 1.97 Total: 3.33 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -4.85 Total: -7.62 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 1.54 Total: -0.24 kcal Atomic # 14 Polarization: -4.07 SS G_CDS: 2.04 Total: -2.03 kcal Total: -15.77 0.58 -15.19 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_34_6672274_11354860.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -132.359 kcal (2) G-P(sol) polarization free energy of solvation -15.773 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -148.132 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.579 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.194 kcal (6) G-S(sol) free energy of system = (1) + (5) -147.553 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.35 seconds